Contig 010435:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMFS078H03+                                                        GGTGGAGCTCCCCGT
                      ____________________________________________________________
consensus                                                          GGTGGAGCTCCCCGT
 
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JMFS078H03+           GAAGGTGGTAGTGGAGGCGGTGGAGGAGGTGAAGTACCAAGTGAAGGTAATGGGGGAGGA
                      ____________________________________________________________
consensus             GAAGGTGGTAGTGGAGGCGGTGGAGGAGGTGAAGTACCAAGTGAAGGTAATGGGGGAGGA
 
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JMFS078H03+           AGAGGGGGTGACATTGGAGCACCATGTGAAAGTGGTGGGGGGGGAGGAGGTGGCGGTGGT
                      ____________________________________________________________
consensus             AGAGGGGGTGACATTGGAGCACCATGTGAAAGTGGTGGGGGGGGAGGAGGTGGCGGTGGT
 
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JMFS078H03+           GGTGGTGGACAACTTTGTGAAGGCAGCGGTGGGGGAGGTGGAACACCCTGTAAAGTTGAT
                      ____________________________________________________________
consensus             GGTGGTGGACAACTTTGTGAAGGCAGCGGTGGGGGAGGTGGAACACCCTGTAAAGTTGAT
 
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JMFS078H03+           GGGAAATTTGCAGGACCTGACACAAACAAAGGAGTACTTCTAAACATAGGAGGAGGAGGA
JMFS066A10+                                 CAAACAAAGGAGTACTTCTAAACATAGTAGTAGNAGGA
                      ____________________________________________________________
consensus             GGGAAATTTGCAGGACCTGACACAAACAAAGGAGTACTTCTAAACATAGTAGTAGGAGGA
 
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JMFS078H03+           GGAGGTGGTGGAGGTGGAGGAGGGGCAGTAGGTGGTGGATATGAAGGTCCTCCAACACTA
JMFS066A10+           GNAGGTGGTGGAGGTGGAGGAGGGGCAGTAGGTGGTGGATATGAAGGTCCTCCAACACTA
JMFS035C11+                                                          TCCTCCAACACTA
                      ____________________________________________________________
consensus             GGAGGTGGTGGAGGTGGAGGAGGGGCAGTAGGTGGTGGATATGAAGGTCCTCCAACACTA
 
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JMFS078H03+           GCAGATTTAACTGTAGATGCTGCAGATGGTGGAGGAGGGGGCGGTGGTGGAATTGGCACA
JMFS066A10+           GCAGATTTAACTGTAGATGCTGCAGATGGTGGAGGAGGGGGCGGTGGTGGAATTGGCACA
JMFS035C11+           GCAGATTTAACTGTAGATGCTGCAGATGGTGGAGGAGGGGGCGGTGGTGGAATTGGCACA
                      ____________________________________________________________
consensus             GCAGATTTAACTGTAGATGCTGCAGATGGTGGAGGAGGGGGCGGTGGTGGAATTGGCACA
 
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JMFS078H03+           GACTTAGGCAGTGCCACAGAAGAAGCTACATTAGCCCAGCTTGTTGAGGTAGTGGGTGCA
JMFS066A10+           GACTTAGGCAGTGCCACAGAAGAAGCTACATTAGCCCAGCTTGTTGAGGTAGTGGGTGCA
JMFS035C11+           GACTTAGGCAGTGCCACAGAAGAAGCTACATTAGCCCAGCTTGTTGAGGTAGTGGGTGCA
                      ____________________________________________________________
consensus             GACTTAGGCAGTGCCACAGAAGAAGCTACATTAGCCCAGCTTGTTGAGGTAGTGGGTGCA
 
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JMFS078H03+           GGTGGTGGAGGAGGAGGAGGTGATGATGAAGTAGAGACAGCAATGCGTGTAGAAAACAGG
JMFS066A10+           GGTGGTGGAGGAGGAGGAGGTGATGATGAAGTAGAGACAACAATGCGTGTAGAAAACAGG
JMFS035C11+           GGTGGTGGAGGAGCAGGAGGTGATGATGAAGTAGAGCCAACAATGCGTGTAGAAAACAGG
                      ____________________________________________________________
consensus             GGTGGTGGAGGAGGAGGAGGTGATGATGAAGTAGAGACAACAATGCGTGTAGAAAACAGG
 
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JMFS078H03+           GGCAAGGGAGGTGGAGGGGGTGGTGGAGGAGGAGGATGACTATTGGTAGAAACTGTTACG
JMFS066A10+           GGCAAGGGAGGTGGAGGGGGTGGTGGAGGAGGAGGATGACTATTGGTAGAAACTGTTACG
JMFS035C11+           GGCAAGGCAGGTGTAGTGGGTGGTGGAGTAGGAGGATGACTATTGGTAGAAACTGTTACG
                      ____________________________________________________________
consensus             GGCAAGGGAGGTGGAGGGGGTGGTGGAGGAGGAGGATGACTATTGGTAGAAACTGTTACG
 
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JMFS078H03+           CTGTGGCTTTCTTGTTGAGGCAGAATATAGATGTGGAGAAGATGC               
JMFS066A10+           CTGTGGCTTTCTTGTTGAGGCA-AATATAGATGTGGAGAAGATGCTGAGACACCACTCCC
JMFS035C11+           CTGTGGCTTTCTTGTTGAGGCA-AATATAGATGTGGAGAAGATGCTGAGACACCACTCCC
                      ____________________________________________________________
consensus             CTGTGGCTTTCTTGTTGAGGCA-AATATAGATGTGGAGAAGATGCTGAGACACCACTCCC
 
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JMFS066A10+           TTCTACCTGCACACATGGGTCTTGAGATGATGAGGAGCCGGTATCTTGTAGGTCTTGGCA
JMFS035C11+           TTCTACCTGCACACATGGGTCTTGAGATGATGAGGAGCCGGTATCTTGTAGGTCTTGGCA
                      ____________________________________________________________
consensus             TTCTACCTGCACACATGGGTCTTGAGATGATGAGGAGCCGGTATCTTGTAGGTCTTGGCA
 
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JMFS066A10+           CTCAACTGGAGGAGAAGTGGAAGAGGGAGTTAATGCTGCTTGAGACATTGATGTGTCAGA
JMFS035C11+           CTCAACTGGAGGAGAAGTGGAAGAGGGAGTTAATGCTGCTTGAGACATTGATGTGTCAGA
                      ____________________________________________________________
consensus             CTCAACTGGAGGAGAAGTGGAAGAGGGAGTTAATGCTGCTTGAGACATTGATGTGTCAGA
 
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JMFS066A10+           TGATGGAGGACAAGAAGACTGTTTTCCCTGTGCACAACCAGCTGCTTCAGCAGTACCATT
JMFS035C11+           TGATGGAGGACAAGAAGACTGTTTTCCCTGTGCACAACCAGCTGCTTCAGCAGTACCATT
                      ____________________________________________________________
consensus             TGATGGAGGACAAGAAGACTGTTTTCCCTGTGCACAACCAGCTGCTTCAGCAGTACCATT
 
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JMFS066A10+           CACTGAAGCAGTAGAAGCCGTAGAAGTACGAGGAGATGCAGAC                 
JMFS035C11+           CACTGAAGCAGTAGAAGCCGTAGAAGTACGAGGAGATGCAGACCTTGATTTCCCACCTGA
                      ____________________________________________________________
consensus             CACTGAAGCAGTAGAAGCCGTAGAAGTACGAGGAGATGCAGACCTTGATTTCCCACCTGA
 
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JMFS035C11+           CTGAGAATCCTTAGCAAGTGCAAATGCAGGTGGAGCACTGTTATACCTTGATGGTGGGTA
                      ____________________________________________________________
consensus             CTGAGAATCCTTAGCAAGTGCAAATGCAGGTGGAGCACTGTTATACCTTGATGGTGGGTA