Contig 010428:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS027D08Sequence479010428 (2)ref|XP_009760514.1|2e-12PREDICTED: E3 ubiquitin-protein ligase MBR2-like [Nicotiana sylvestris]
JMFS132E06Sequence619010428 (2)ref|XP_004248755.1|6e-34PREDICTED: E3 ubiquitin-protein ligase MBR2 isoform X2 [Solanum lycopersicum] r

Alignment

This contig is upended


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JMFS132E06+                                      CGTTCATGAATGAAATGTTAGAAGGCTCAAATC
                      ____________________________________________________________
consensus                                        CGTTCATGAATGAAATGTTAGAAGGCTCAAATC
 
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JMFS132E06+           CCCTTTCTTCTAACCTTGGATCAGGCTCATTAGCTACAGCATAATTGGTTGATGAAGATG
                      ____________________________________________________________
consensus             CCCTTTCTTCTAACCTTGGATCAGGCTCATTAGCTACAGCATAATTGGTTGATGAAGATG
 
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JMFS132E06+           ACCAACCATGCCCTATATTCAAATCACTGCCAAAAACACGATCATTTGAATTTGCAGTGG
                      ____________________________________________________________
consensus             ACCAACCATGCCCTATATTCAAATCACTGCCAAAAACACGATCATTTGAATTTGCAGTGG
 
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JMFS132E06+           AACTAGACTCACCTTGATCCCAGCCACTGAAACTTGGTGCACAATCAGCATTTCTGCCGC
                      ____________________________________________________________
consensus             AACTAGACTCACCTTGATCCCAGCCACTGAAACTTGGTGCACAATCAGCATTTCTGCCGC
 
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JMFS132E06+           CAACAGCAACCATCGAGTTTGAAAATCGACCATCAACTGGATCCAGCAGGTTCTCCCAAG
JMFS027D08+            AACAGCAACCATTGAGTTTGAAAATCGACCATCAACTGGATCCAGCAGGTTCTCCCAAG
                      ____________________________________________________________
consensus             CAACAGCAACCATTGAGTTTGAAAATCGACCATCAACTGGATCCAGCAGGTTCTCCCAAG
 
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JMFS132E06+           GGCTTGACTGATCCATGGAAGCGTTAGTGTACACAGATCCCTGATTAAGATCAATTGTCT
JMFS027D08+           GGCTTGACTGATCCATGGAAGCGTTAGTGTACACAGATCCCTGATTAAGATCAATTGTCT
                      ____________________________________________________________
consensus             GGCTTGACTGATCCATGGAAGCGTTAGTGTACACAGATCCCTGATTAAGATCAATTGTCT
 
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JMFS132E06+           CAGGAAATGAATCCAAAATACTTCTCCTCCTTTGCATCTGTTCCACTTAGATCTCCTGAT
JMFS027D08+           CAGGAAATGAATCCAAAATACTTGTCCTCCTTTGCATCTGTTCCATTTAGATCTCCTGAT
                      ____________________________________________________________
consensus             CAGGAAATGAATCCAAAATACTTGTCCTCCTTTGCATCTGTTCCATTTAGATCTCCTGAT
 
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JMFS132E06+           TCCCAAGGCAGCAAATTGAATTCAATTCCCAAGTCAATCTAAGGAGCTGTTACAGATGAT
JMFS027D08+           TCCCAAGGCAGCAAATTGAATTCAATTCCCAAGTCAATCTAAGGAGCTGTTACAGATGAT
                      ____________________________________________________________
consensus             TCCCAAGGCAGCAAATTGAATTCAATTCCCAAGTCAATCTAAGGAGCTGTTACAGATGAT
 
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JMFS132E06+           GATCGGGTTACCCGAGGAGGGGAAACAAAGGCGTTCCTCAGAAATCAGCCAACACTTCCT
JMFS027D08+           GATCGGGTTACCCGAGGAGGGGAAACAAAGGCGTTCCTCAGAAATCAGCCAACACTTCCT
                      ____________________________________________________________
consensus             GATCGGGTTACCCGAGGAGGGGAAACAAAGGCGTTCCTCAGAAATCAGCCAACACTTCCT
 
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JMFS132E06+           CGGTGCATATCTAAAGATTCCTTGTGTGTGTATAGGGTTTCATAGTTCCATTCCTGAGCA
JMFS027D08+           CGGTGCATATCTAAAGATTCCTTGTGTGTGTATAGGGTTTCATAGTTCCATTCCTGAGCA
                      ____________________________________________________________
consensus             CGGTGCATATCTAAAGATTCCTTGTGTGTGTATAGGGTTTCATAGTTCCATTCCTGAGCA
 
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JMFS132E06+           GCAGAAGGCGTACGGCAACCGCCCCTGTTGGCGGATATAGATTGCG              
JMFS027D08+           GCAGAAGGCGTACGGCAACCGCCCCTGTTGGCGGATATAGATTGCGGTTTTGTGTGTGTG
                      ____________________________________________________________
consensus             GCAGAAGGCGTACGGCAACCGCCCCTGTTGGCGGATATAGATTGCGGTTTTGTGTGTGTG
 
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JMFS027D08+           TGTGAGTGCGCAGATGCAGAAGACGGCGAGGTGTCGACAGGCAGCGAAGTTCCGCGAGGG
                      ____________________________________________________________
consensus             TGTGAGTGCGCAGATGCAGAAGACGGCGAGGTGTCGACAGGCAGCGAAGTTCCGCGAGGG