Contig 010425:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS005H12Sequence563010425 (2)ref|XP_006363424.1|1e-62PREDICTED: ARF guanine-nucleotide exchange factor GNOM-like [Solanum tuberosum]
JMFS025A12Sequence596010425 (2)ref|XP_006363424.1|3e-61PREDICTED: ARF guanine-nucleotide exchange factor GNOM-like [Solanum tuberosum]

Alignment

This contig is upended


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JMFS005H12+               TAGTAGTTGAATCAATAATTTCAAGACTTAAGAATTTGTAAATGGATGACAAAGCA
JMFS025A12+               TAGTAGTTGAATCAATAATTTCAAGACTTAAGAATTTGTAAATGGATGACAAAGCA
                      ____________________________________________________________
consensus                 TAGTAGTTGAATCAATAATTTCAAGACTTAAGAATTTGTAAATGGATGACAAAGCA
 
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JMFS005H12+           ACACCAGTGATTGGGGCACCAGTTTCATCAGATTGAACCACATCCAGAAATGGTTGGAGA
JMFS025A12+           ACACCAGTGATTGGGGCACCAGTTTCATCAGATTGAACCACATCCAGAAATGGTTGGAGA
                      ____________________________________________________________
consensus             ACACCAGTGATTGGGGCACCAGTTTCATCAGATTGAACCACATCCAGAAATGGTTGGAGA
 
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JMFS005H12+           TAGGCAATTGGATCAATAGTATTCCATTGGTGTTGCCATGAGAATATATTTTTCCGTAGA
JMFS025A12+           TAGGCAATTGGATCAATAGTATTCCATTGGTGTTGCCATGAGAATATATTTTTCAGTAGA
                      ____________________________________________________________
consensus             TAGGCAATTGGATCAATAGTATTCCATTGGTGTTGCCATGAGAATATATTTTTCCGTAGA
 
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JMFS005H12+           TCCTTGAAGGATTGAATAAGAGAGTGCTCTAACTGGTCATCATTAGCGGCATAATGAACC
JMFS025A12+           TCCTTGAAGGATTGAATAAGAGAGTGCTCTAACTGGTCATCATTAGCGGCATAATGAACC
                      ____________________________________________________________
consensus             TCCTTGAAGGATTGAATAAGAGAGTGCTCTAACTGGTCATCATTAGCGGCATAATGAACC
 
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JMFS005H12+           CCCCACCGTACATTTCTCCTCATCACAGCTAAAACTGCACCAATTTCAGAATTCACCATA
JMFS025A12+           CCCCACCGTACATTTCTCCTCATCACAGCTAAAACTGCACCAATTTCAGAATTCACCATA
                      ____________________________________________________________
consensus             CCCCACCGTACATTTCTCCTCATCACAGCTAAAACTGCACCAATTTCAGAATTCACCATA
 
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JMFS005H12+           CAAGCCAAGGCACCCCTGGATGGCTTCAAGGTGCCACCTTTGGGCTCTGAACATACACCA
JMFS025A12+           CAAGCCAAGGCACCCCTGGATGGCTTCAAGGTGCCACCTTTGGGCTCTGAACATACACCA
                      ____________________________________________________________
consensus             CAAGCCAAGGCACCCCTGGATGGCTTCAAGGTGCCACCTTTGGGCTCTGAACATACACCA
 
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JMFS005H12+           TTCATTTCAATATGCTTATTCAGGCACCCCATAGTGGTTTAGCTTCCATGAAACTCCACT
JMFS025A12+           TTCATTTCAATATGCTTATTCAGGCACCCCATAGTGGTTTAGCTTCCATGAAACTCCACT
                      ____________________________________________________________
consensus             TTCATTTCAATATGCTTATTCAGGCACCCCATAGTGGTTTAGCTTCCATGAAACTCCACT
 
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JMFS005H12+           TTAGATGCCAAATTAATAAAAAAGCTACCAAGTGAAATGAGGCACCTTATCATAACCCAG
JMFS025A12+           TTAGATGCCAAATTAATCAAAAAGCTACCAAGTGAAATGAGGCACCTTATCATAACCCAG
                      ____________________________________________________________
consensus             TTAGATGCCAAATTAATCAAAAAGCTACCAAGTGAAATGAGGCACCTTATCATAACCCAG
 
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JMFS005H12+           CCAAATTGTTCATCTTGTTGACGGTCACTGTACCGAGCAGTCGGAGGGTCATTGCAGTGG
JMFS025A12+           CCAAATTGTTCATCTTGTTGACGGTCACTGTACCGAGCAGTCGGAGGGTCATTGCAGTGG
                      ____________________________________________________________
consensus             CCAAATTGTTCATCTTGTTGACGGTCACTGTACCGAGCAGTCGGAGGGTCATTGCAGTGG
 
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JMFS005H12+           TCACCGACGGTGGAATTTTAGCATTTG                                 
JMFS025A12+           TCACCGACGGTGGAATTTTAGCATTTGATCTCCGATGTTCTCGTCAAATCTTATGTGAAC
                      ____________________________________________________________
consensus             TCACCGACGGTGGAATTTTAGCATTTGATCTCCGATGTTCTCGTCAAATCTTATGTGAAC