Contig 010421:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS007E12Sequence600010421 (2)ref|XP_006340511.1|5e-61PREDICTED: leucine-rich repeat receptor-like protein kinase PXL1-like [Solanum
JMFS021F12Sequence605010421 (2)ref|XP_003535373.1|2e-58PREDICTED: leucine-rich repeat receptor-like protein kinase PXL1-like [Glycine

Alignment

This contig is upended


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JMFS007E12+                                                            TTCTTGAAAGA
                      ____________________________________________________________
consensus                                                              TTCTTGAAAGA
 
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JMFS007E12+           ACCCGGAATTGAGCCTTCAAAGAAGCTCCCGCGAAAATCCACCTCTTCTAGCCCGGTTGC
JMFS021F12+                    TGAGCCTTCAAAGAAGCTCCCGCGAAAATCCACCTCTTCTAGCCCGGTTGC
                      ____________________________________________________________
consensus             ACCCGGAATTGAGCCTTCAAAGAAGCTCCCGCGAAAATCCACCTCTTCTAGCCCGGTTGC
 
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JMFS007E12+           ATTCCCAAGATCCTCAGGCAGTAACCCCACAAAATTGTTGCTCGAAGCATTCAGATATCT
JMFS021F12+           ATTCCCAAGATCCTCAGGCAGTAACCCCACAAAATTGTTGCTCGAAGCATTCAGATATCT
                      ____________________________________________________________
consensus             ATTCCCAAGATCCTCAGGCAGTAACCCCACAAAATTGTTGCTCGAAGCATTCAGATATCT
 
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JMFS007E12+           CAGCCCAGGCGCCCTCCCAATCCCTCCTGGAAACGTGCCAACAAAGCTGTTAGAACTCAC
JMFS021F12+           CAGCCCAGGCGCCCTCCCAATCCCTCCTGGAAACGTGCCAACAAAGCTGTTAGAACTCAC
                      ____________________________________________________________
consensus             CAGCCCAGGCGCCCTCCCAATCCCTCCTGGAAACGTGCCAACAAAGCTGTTAGAACTCAC
 
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JMFS007E12+           GTCGAGGCTCCTCAACAAAGTGAGATTAGCCAGGGAGCGTGGCAACGATGAAGACAAGTA
JMFS021F12+           GTCGAGGCTCCTCAACAAAGTGAGATTAGCCAGGGAGCGTGGCAACGATGAAGACAAGTA
                      ____________________________________________________________
consensus             GTCGAGGCTCCTCAACAAAGTGAGATTAGCCAGGGAGCGTGGCAACGATGAAGACAAGTA
 
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JMFS007E12+           ATTGCAGCACAAGTTCAGATCAGACAGGACACTCAACCCATGAATCTTTTCTGAAACATG
JMFS021F12+           ATTGCAGCACAAGTTCAGATCAGACAGGACACTCAACCCATGAATCTTTTCTGAAACATG
                      ____________________________________________________________
consensus             ATTGCAGCACAAGTTCAGATCAGACAGGACACTCAACCCATGAATCTTTTCTGAAACATG
 
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JMFS007E12+           GCCACTGAGGTTCCTGTTCGACAAGTCCAGCTTCTCCACAACGCCTTTCGAGTTGCAGAA
JMFS021F12+           GCCACTGAGGTTCCTGTTCGACAAGTCCAGCTTCTCCACAACGCCTTTCGAGTTGCAGAA
                      ____________________________________________________________
consensus             GCCACTGAGGTTCCTGTTCGACAAGTCCAGCTTCTCCACAACGCCTTTCGAGTTGCAGAA
 
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JMFS007E12+           CACTCCAGTCCAGGTGCAATAATGAACTGAAGTGTTGCCACTTTCTTCCCAGTCTTTCAG
JMFS021F12+           CACTCCAGTCCAGGTGCAATAATGAACTGAAGTGTTGCCACTTTCTTCCCAGTCTTTCAG
                      ____________________________________________________________
consensus             CACTCCAGTCCAGGTGCAATAATGAACTGAAGTGTTGCCACTTTCTTCCCAGTCTTTCAG
 
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JMFS007E12+           GTGACCCATTGGATCAACCAGACCAGCCTTAATTGACAGCAACACTGATACTTCATCATC
JMFS021F12+           GTGACCCATTGGATCAACCAGACCAGCCTTAATTGACAGCAACACTGATACTTCATCATC
                      ____________________________________________________________
consensus             GTGACCCATTGGATCAACCAGACCAGCCTTAATTGACAGCAACACTGATACTTCATCATC
 
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JMFS007E12+           ATCATCTCCATTGACAAAAACTAAAGACAGAACAATACAACAGTACAAGAAAACAATGTG
JMFS021F12+           ATCATCTCCATTGACAAAAACTAAAGACAGAACAATACAACAGTACAAGAAAACAATGTG
                      ____________________________________________________________
consensus             ATCATCTCCATTGACAAAAACTAAAGACAGAACAATACAACAGTACAAGAAAACAATGTG
 
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JMFS007E12+           GATTTTCATCTTCATGTCTTCTGTTTCTTGCTCTCTCCCTCTCAGTTTC           
JMFS021F12+           GATTTTCATCTTCATGTCTTCTGTTTCTTGCTCTCTCCCTCTCAGTTTCTCATCTTTTTT
                      ____________________________________________________________
consensus             GATTTTCATCTTCATGTCTTCTGTTTCTTGCTCTCTCCCTCTCAGTTTCTCATCTTTTTT