Contig 010417:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS017C05Sequence618010417 (2)ref|XP_011082824.1|1e-22PREDICTED: translation initiation factor IF-2, chloroplastic isoform X1 [Sesamu
JMFS090E08Sequence634010417 (2)ref|XP_010060813.1|7e-46PREDICTED: translation initiation factor IF-2, chloroplastic-like isoform X1 [E

Alignment

This contig is upended


. : . : . : . : . : . :
JMFS090E08+ AGTTTGCACACCATCAGGTTTGATTCCCTTCGTGTAGA
                      ____________________________________________________________
consensus AGTTTGCACACCATCAGGTTTGATTCCCTTCGTGTAGA
 
. : . : . : . : . : . :
JMFS090E08+ AGTAACTAAGAATTTCACCTTCACTAATAGTTAAGTTGTAGGCCAACTCCTCAATTAACA
                      ____________________________________________________________
consensus AGTAACTAAGAATTTCACCTTCACTAATAGTTAAGTTGTAGGCCAACTCCTCAATTAACA
 
. : . : . : . : . : . :
JMFS090E08+ TGCCATCTTCATCAACCTCCAGAATTTCAACTTTAACAGGAGCAGCCTCTTTAGCTGCCT
                      ____________________________________________________________
consensus TGCCATCTTCATCAACCTCCAGAATTTCAACTTTAACAGGAGCAGCCTCTTTAGCTGCCT
 
. : . : . : . : . : . :
JMFS090E08+ GCAATCTTGCTGCCTTACGACTTGCCTTGGTCCATTTTCTACCTTTCCTTGCAGTAATAG
JMFS017C05+ CTTTCCTTGCAGTAATAG
                      ____________________________________________________________
consensus GCAATCTTGCTGCCTTACGACTTGCCTTGGTCCATTTTCTACCTTTCCTTGCAGTAATAG
 
. : . : . : . : . : . :
JMFS090E08+ AAACATCCAGTTCTGATGCCTCGTCATGGTCATCATCAACTACCATTCGCCTGCGCAGTC
JMFS017C05+ AAACATCCAGTTCTGATGCCTCGTCATGGTCATCATCAACTACCATTCGCCTGCGCAGTC
                      ____________________________________________________________
consensus AAACATCCAGTTCTGATGCCTCGTCATGGTCATCATCAACTACCATTCGCCTGCGCAGTC
 
. : . : . : . : . : . :
JMFS090E08+ CTCCTGATGCACCACTCTTTTTACGGAACTCATCCTTGAACCTAGATGGAGCACTCTTTC
JMFS017C05+ CTCCTGATGCACCACTCTTTTTACGGAACTCATCCTTGAACCTAGATGGAGCACTCTTTC
                      ____________________________________________________________
consensus CTCCTGATGCACCACTCTTTTTACGGAACTCATCCTTGAACCTAGATGGAGCACTCTTTC
 
. : . : . : . : . : . :
JMFS090E08+ CAGGTTTTGAAGGGCTCTTTGCGGGTTTTGGTGGGGCTAAAACTGCTTTAGAAACCAGAG
JMFS017C05+ CAGGTTTTGAAGGGCTCTTTGCGGGTTTTGGTGGGGCTAAAACTGCTTTAGAAACCAGAG
                      ____________________________________________________________
consensus CAGGTTTTGAAGGGCTCTTTGCGGGTTTTGGTGGGGCTAAAACTGCTTTAGAAACCAGAG
 
. : . : . : . : . : . :
JMFS090E08+ GATCAGCAACTGGTTTCTTAGAAGCAAATTTGTCAACTAATATTGGTTGGCGTTCTTTGG
JMFS017C05+ GATCAGCAACTGGTTTCTTAGAAGCAAATTTGTCAACTAATATTGGTTGGCGTTCTTTGG
                      ____________________________________________________________
consensus GATCAGCAACTGGTTTCTTAGAAGCAAATTTGTCAACTAATATTGGTTGGCGTTCTTTGG
 
. : . : . : . : . : . :
JMFS090E08+ CCTTTGCAGGTGCCCCAGTAGCGGCTGGGGGCTTAGGAGCTGCCCCAACATCCTTCAAGA
JMFS017C05+ CCTTTGCAGGTGCCCCAGTAGCGGCTGGGGGCTTAGGAGCTGCCCCAACATCCTTCAAGA
                      ____________________________________________________________
consensus CCTTTGCAGGTGCCCCAGTAGCGGCTGGGGGCTTAGGAGCTGCCCCAACATCCTTCAAGA
 
. : . : . : . : . : . :
JMFS090E08+ TAACCGCTCTCTTAACTACAGGTGGAGGAGCTACAGGTGGAGGAGGAGGAGGAGCTACAG
JMFS017C05+ TAACCGCTCTCTTAACTACAGGTGGAGGAGCTACAGGTGGAGGAGGAGGAGGAGCTACAG
                      ____________________________________________________________
consensus TAACCGCTCTCTTAACTACAGGTGGAGGAGCTACAGGTGGAGGAGGAGGAGGAGCTACAG
 
. : . : . : . : . : . :
JMFS090E08+ ATGGTCTTGCTTGCAACATGGGTTCAACTTTCTGAGGTGGCTGAGGGGGTCTTAGA
JMFS017C05+ ATGGTCTTGCTTGCAACATGGGTTCAACTTTCTGAGGTGGCTGAGGGGGTCTTAGAGGAG
                      ____________________________________________________________
consensus ATGGTCTTGCTTGCAACATGGGTTCAACTTTCTGAGGTGGCTGAGGGGGTCTTAGAGGAG
 
. : . : . : . : . : . :
JMFS017C05+ CAGCAGGTTGAGACTCGGTCTTCTCTGTGCTGCTTGTTTTTAGTTCTTGTTTTGGAGGTT
                      ____________________________________________________________
consensus CAGCAGGTTGAGACTCGGTCTTCTCTGTGCTGCTTGTTTTTAGTTCTTGTTTTGGAGGTT
 
. : . : . : . : . : . :
JMFS017C05+ GCTTTACAGCATTTTGTACTGTAGGTACCGGATTCCCTTTCCTCCAGACACTCTTCGACG
                      ____________________________________________________________
consensus GCTTTACAGCATTTTGTACTGTAGGTACCGGATTCCCTTTCCTCCAGACACTCTTCGACG
 
. : . : . : . : . : . :
JMFS017C05+ TACTAGAATTTTGCTGGGGAATAGCCATTGAATTAATCGGTTTGCCATTTTTTGCTTCAA
                      ____________________________________________________________
consensus TACTAGAATTTTGCTGGGGAATAGCCATTGAATTAATCGGTTTGCCATTTTTTGCTTCAA