Contig 010416:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS015H09Sequence527010416 (3)ref|XP_011098337.1|183PREDICTED: uncharacterized protein LOC105177021 [Sesamum indicum]
JMFS084C03Sequence627010416 (3)emb|CDP05883.1|2e-72unnamed protein product [Coffea canephora]
JMFS104A12Sequence618010416 (3)emb|CDP05883.1|4e-57unnamed protein product [Coffea canephora]

Alignment

This contig is upended


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JMFS084C03+                                                    TGCCTTAAATCCTGACACT
                      ____________________________________________________________
consensus                                                      TGCCTTAAATCCTGACACT
 
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JMFS084C03+           AGAGCACGAGCATACGCCATGGCTTGCTCTTTCCTAAGAACCACCTTTCGAGTTTCCAGA
JMFS104A12+                                      TCTTTCCTAAGAACCACCTTTCGAGTTTCCAGA
                      ____________________________________________________________
consensus             AGAGCACGAGCATACGCCATGGCTTGCTCTTTCCTAAGAACCACCTTTCGAGTTTCCAGA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS084C03+           ATGCGTTGCAGACGAGCCTTGGAATCTTCTCCTTGGGAAGTTTCACCAGTTCCATTGGAT
JMFS104A12+           ATGCGTTGCAGACGAGCCTTGGAATCTTCTCCTTGGGAAGTTTCACCAGTTCCATTGGAT
                      ____________________________________________________________
consensus             ATGCGTTGCAGACGAGCCTTGGAATCTTCTCCTTGGGAAGTTTCACCAGTTCCATTGGAT
 
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JMFS084C03+           TCAACTTCTGCCTCAGATGCCACGCTTGGCTGTTCATTCGGTTGAACTGAACTCTCAATC
JMFS104A12+           TCAACTTCTGCCTCAGATGCCACGCTTGGCTGTTCATTCGGTTGAACTGAACTCTCAATC
JMFS015H09+                        CAGATGCCACGCTTGGCTGTTCATTCGGTTGAACTGAACTCTCAATC
                      ____________________________________________________________
consensus             TCAACTTCTGCCTCAGATGCCACGCTTGGCTGTTCATTCGGTTGAACTGAACTCTCAATC
 
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JMFS084C03+           TGCGCGATCTCTCTCTCAATGCTAACAAATCTCTCAAGAACTTCTGGACTACTTACAAAC
JMFS104A12+           TGCGCGATCTCTCTCTCAATGCTAACAAATCTCTCAAGAACTTCTGGACTACTTACAAAC
JMFS015H09+           TGCGCGATCTCTCTCTCAATGCTAACAAATCTCTCAAGAACTTCTGGACTACTTACAAAC
                      ____________________________________________________________
consensus             TGCGCGATCTCTCTCTCAATGCTAACAAATCTCTCAAGAACTTCTGGACTACTTACAAAC
 
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JMFS084C03+           TTTACAAACCTTTCCAAAGTAGCTTTGGTGAACCAAGAAGAATTGGAAGTGTGTGGAGTA
JMFS104A12+           TTTACAAACCTTTCCAAAGTAGCTTTGGTGAACCAAGAAGAATTGGAAGTGTGTGGAGTA
JMFS015H09+           TTTACAAACCTTTCCAAAGTAGCTTTGGTGAACCAAGAAGAATTGGAAGTGTGTGGAGTA
                      ____________________________________________________________
consensus             TTTACAAACCTTTCCAAAGTAGCTTTGGTGAACCAAGAAGAATTGGAAGTGTGTGGAGTA
 
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JMFS084C03+           GAAGGGCGAAGAGTAATGGAGTAGCCTCCTCTGGAAATCTGATCTTGAGCGGATTTGAGA
JMFS104A12+           GAAGGGCGAAGAGTAATGGAGTAGCCTCCTCTGGAAATCTGATCTTGAGCGGATTTGAGA
JMFS015H09+           GAAGGGCGAAGAGTAATGGAGTAGCCTCCTCTGGAAATCTGATCTTGAGCGGATTTGAGA
                      ____________________________________________________________
consensus             GAAGGGCGAAGAGTAATGGAGTAGCCTCCTCTGGAAATCTGATCTTGAGCGGATTTGAGA
 
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JMFS084C03+           TGAGAAATGAAGGGTTGAAGCAACCCAGACGCCAGTTTCTCATTTTTCTTGCCGGAAAAG
JMFS104A12+           TGAGAAATGAAGGGTTGAAGCAACCCAGACGCCAGTTTCTCATTTTTCTTGCCGGAAAAG
JMFS015H09+           TGAGAAATGAAGGGTTGAAGCAACCCAGACGCCAGTTTCTCATTTTTCTTGCCGGAAAAG
                      ____________________________________________________________
consensus             TGAGAAATGAAGGGTTGAAGCAACCCAGACGCCAGTTTCTCATTTTTCTTGCCGGAAAAG
 
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JMFS084C03+           ATGACAAGATCGCATCT                                           
JMFS104A12+           ATGACAAGATCGCATCTTTATCAAATCAAAACATTGTGAAAATCCAAGAAATCAACGAAC
JMFS015H09+           ATGACAAGATCGCATCTTTATCAAATCAAAACATTGTGAAAATCCAAGAAATCAACGAAC
                      ____________________________________________________________
consensus             ATGACAAGATCGCATCTTTATCAAATCAAAACATTGTGAAAATCCAAGAAATCAACGAAC
 
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JMFS104A12+           GAACTACTAAACAGTAGAAAATGTAGTAATTACCTGGTCCTTGTTGGGGTGAGCTGAAAC
JMFS015H09+           GAACTACTAAACAGTAGAAAATGTAGTAATTACCTGGTCCTTGTTGGGGTGAGCTGAAAC
                      ____________________________________________________________
consensus             GAACTACTAAACAGTAGAAAATGTAGTAATTACCTGGTCCTTGTTGGGGTGAGCTGAAAC
 
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JMFS104A12+           AAAACATAATCAAGAAGAGTAGCTGAATCCATTTTCTTCGTCGTTTAATTAGCATACAAA
JMFS015H09+           AAAACATAATCAAGAAGAGTAGCTGAATCCATTTTCTTCGTCGTTTAATTAGCATACAAA
                      ____________________________________________________________
consensus             AAAACATAATCAAGAAGAGTAGCTGAATCCATTTTCTTCGTCGTTTAATTAGCATACAAA
 
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JMFS104A12+           ATGGAGACACACCCTGCAGAATCTGCAGAACAGGGCACGAATGTT               
JMFS015H09+           ATGGAGACACACCCTGCAGAATCTGCAGAACAGGGCACGAATGTTTGTTTTGAGAGTTGT
                      ____________________________________________________________
consensus             ATGGAGACACACCCTGCAGAATCTGCAGAACAGGGCACGAATGTTTGTTTTGAGAGTTGT