| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFS011E11 | Sequence | 602 | 010411 (6) | ||||||||
| JMFS057C05 | Sequence | 637 | 010411 (6) | ref|XP_008241890.1| | 3e-10 | PREDICTED: U-box domain-containing protein 5-like, partial [Prunus mume] | |||||
| JMFS094C02 | Sequence | 626 | 010411 (6) | ref|XP_009371612.1| | 3e-32 | PREDICTED: U-box domain-containing protein 5-like [Pyrus x bretschneideri] ref|X | |||||
| JMFS108A08 | Sequence | 626 | 010411 (6) | ref|XP_009603280.1| | 6e-46 | PREDICTED: U-box domain-containing protein 5 [Nicotiana tomentosiformis] ref|XP_ | |||||
| JMFS141C12 | Sequence | 626 | 010411 (6) | ref|XP_008241890.1| | 3e-10 | PREDICTED: U-box domain-containing protein 5-like, partial [Prunus mume] | |||||
| JMSF026M03 | Sequence | 672 | 010411 (6) | ref|XP_009371612.1| | 1e-28 | PREDICTED: U-box domain-containing protein 5-like [Pyrus x bretschneideri] ref|X | 697 | 005854 (2) | ref|XP_009603280.1| | 4e-25 | PREDICTED: U-box domain-containing protein 5 [Nicotiana tomentosiformis] ref|XP_ |
This contig is upended
. : . : . : . : . : . :
JMFS108A08+ AAGATCAGCAACTAA
____________________________________________________________
consensus AAGATCAGCAACTAA
. : . : . : . : . : . :
JMFS108A08+ CTGAGAAATCTCTGCAGCCAGCATAACGGGGACCATATGTTGCATCTCGCCTAAGCTTCG
JMFS094C02+ AAGCTTCG
____________________________________________________________
consensus CTGAGAAATCTCTGCAGCCAGCATAACGGGGACCATATGTTGCATCTCGCCTAAGCTTCG
. : . : . : . : . : . :
JMFS108A08+ CTCCAGTAACTTCGTTGACTTTTTGCATCTTGCGAGTATAACATCACCCGTTAGAGCCAA
JMFS094C02+ CTCCAGTAACTTCGTTGACTTTTGCATCNTTGCGAGTATAACATCACCCGTTAGAGCCAA
JMSF026M03+ CGAGTATAACATCACCCGTTAGAGCCAA
____________________________________________________________
consensus CTCCAGTAACTTCGTTGACTTTTTGCTTCTTGCGAGTATAACATCACCCGTTAGAGCCAA
. : . : . : . : . : . :
JMFS108A08+ ATAGATCTTACTGGATTCACTGCATTGCTGAAGTATTAACTTGGCCTTGTCGATCGCTTG
JMFS094C02+ ATAGATCTTACTGGATTCACTGCATTGCTGAAGTATTAACTTGGCCTTGTCGATCGCTTG
JMSF026M03+ ATAGATCTTACTGGATTCACTGCATTGCTGAAGTATTAACTTGGCCTTGTCGATCGCTTG
____________________________________________________________
consensus ATAGATCTTACTGGATTCACTGCATTGCTGAAGTATTAACTTGGCCTTGTCGATCGCTTG
. : . : . : . : . : . :
JMFS108A08+ GTTCAATAGGCAAAGTGCCTCCAATCCCGATGTGCATCGAGGTCGAGATGCTTCTATTTC
JMFS094C02+ GTTCAATAGGCAAAGTGCCTCCAATCCCGATGTGCATCGAGGTCGAGATGCTTCTATTTC
JMSF026M03+ GTTCAATAGGCAAAGTGCCTCCAATCCCGATGTGCATCGAGGTCGAGATGCTTCTATTTC
JMFS141C12+ GTGCATCGAGGTCGAGATGCTTCTATTTC
JMFS057C05+ GCATCGAGGTCGAGATGCTTCTATTTC
____________________________________________________________
consensus GTTCAATAGGCAAAGTGCCTCCAATCCCGATGTGCATCGAGGTCGAGATGCTTCTATTTC
. : . : . : . : . : . :
JMFS108A08+ CGGAAGTATTTCCAAGGCTCGAGTAACAAACTTGATCAATTCCGAACACATTAGAAGATG
JMFS094C02+ CGGAAGTATTTCCAAGGCTCGAGTAACAAACTTGATCAATTCCGAACACATTAGAAGATG
JMSF026M03+ CGGAAGTATTTCCAAGGCTCGAGTAACAAACTTGATCAATTCCGAACACATTAGAAGATG
JMFS141C12+ CGGAAGTATTTCCAAGGCTCGAGTAACAAACTTGATCAATTCCGAACACATTAGAAGATG
JMFS057C05+ CGGAAGTATTTCCAAGGCTCGAGTAACAAACTTGATCAATTCCGAACACATTAGAAGATG
____________________________________________________________
consensus CGGAAGTATTTCCAAGGCTCGAGTAACAAACTTGATCAATTCCGAACACATTAGAAGATG
. : . : . : . : . : . :
JMFS108A08+ CACCTTAATAGACTGAGGAGACGGGAGTGCTTCTGCACCTTCAGTGGGATCACTCCCCAT
JMFS094C02+ CACCTTAATAGACTGAGGAGACGGGAGTGCTTCTGCACCTTCAGTGGGATCACTCCCCAT
JMSF026M03+ CACCTTAATAGACTGAGGAGACGGGAGTGCTTCTGCACCTTCAGTGGGATCACTCCCCAT
JMFS141C12+ CACCTTAATAGACTGAGGAGACGGGAGTGCTTCTGCACCTTCAGTGGGATCACTCCCCAT
JMFS057C05+ CACCTTAATAGACTGAGGAGACGGGAGTGCTTCTGCACCTTCAGTGGGATCACTCCCCAT
JMFS011E11+ AT
____________________________________________________________
consensus CACCTTAATAGACTGAGGAGACGGGAGTGCTTCTGCACCTTCAGTGGGATCACTCCCCAT
. : . : . : . : . : . :
JMFS108A08+ AAAGAAGGATTATCAGTGACACACAGATGTATGGTTAAACTGCAAACAGAAGAATCAGAA
JMFS094C02+ AAAGAAGGATTATCAGTGACACACAGATGTATGGTTAAACTGCAAACAGAAGAATCAGAA
JMSF026M03+ AAAGAAGGATTATCAGTGACACACAGATGTATGGTTAAACTGCAAACAGAAGAATCAGAA
JMFS141C12+ AAAGAAGGATTATCAGTGACACACAGATGTATGGTTAAACTGCAAACAGAAGAATCAGAA
JMFS057C05+ AAAGAAGGATTATCAGTGACACACAGATGTATGGTTAAACTGCAAACAGAAGAATCAGAA
JMFS011E11+ AAAGAAGGATTATCAGTGACACACAGATGTATGGTTAAACTGCAAACAGAAGAATCAGAA
____________________________________________________________
consensus AAAGAAGGATTATCAGTGACACACAGATGTATGGTTAAACTGCAAACAGAAGAATCAGAA
. : . : . : . : . : . :
JMFS108A08+ AGATGATGGATTCCAGGCAAAATTTCAAACTTGAAGCACTAAAACCTAGTTCAAACTCAA
JMFS094C02+ AGATGATGGATTCCAGGCAAAATTTCAAACTTGAAGCACTAAAACCTAGTTCAAACTCAA
JMSF026M03+ AGATGATGGATTCCAGGCAAAATTTCAAACTTGAAGCACTAAAACCTAGTTCAAACTCAA
JMFS141C12+ AGATGATGGATTCCAGGCAAAATTTCAAACTTGAAGCACTAAAACCTAGTTCAAACTCAA
JMFS057C05+ AGATGATGGATTCCAGGCAAAATTTCAAACTTGAAGCACTAAAACCTAGTTCAAACTCAA
JMFS011E11+ AGATGATGGATTCCAGGCAAAATTTCAAACTTGAAGCACTAAAACCTAGTTCAAACTCAA
____________________________________________________________
consensus AGATGATGGATTCCAGGCAAAATTTCAAACTTGAAGCACTAAAACCTAGTTCAAACTCAA
. : . : . : . : . : . :
JMFS108A08+ GAAAAGCTGCAATCTTTCTTAACTTGTTGCCCAGATAAGAAAACCCCACTCTTTTAAGAT
JMFS094C02+ GAAAAGCTGCAATCTTTCTTAACTTGTTGCCCAGATAAGAAAACCCCACTCTTTTAAGAT
JMSF026M03+ GAAAAGCTGCAATCTTTCTTAACTTGTTGCCCAGATAAGAAAACCCCACTCTTTTAAGAT
JMFS141C12+ GAAAAGCTGCAATCTTTCTTAACTTGTTGCCCAGATAAGAAAACCCCACTCTTTTAAGAT
JMFS057C05+ GAAAAGCTGCAATCTTTCTTAACTTGTTGCCCAGATAAGAAAACCCCACTCTTTTAAGAT
JMFS011E11+ GAAAAGCTGCAATCTTTCTTAACTTGTTGCCCAGATAAGAAAACCCCACTCTTTTAAGAT
____________________________________________________________
consensus GAAAAGCTGCAATCTTTCTTAACTTGTTGCCCAGATAAGAAAACCCCACTCTTTTAAGAT
. : . : . : . : . : . :
JMFS108A08+ GCCCAAAAATGAAAAATCCCACTTGTCTTCCCAAGTGGATAAGCCTAGAGATTCTGGGTC
JMFS094C02+ GCCCAAAAATGAAAAATCCCACTTGTCTTCCCAAGTGGATAAGCCTAGAGATTCTGGGTC
JMSF026M03+ GCCCAAAAATGAAAAATCCCACTTGTCTTCCCAAGTGGATAAGCCTAGAGATTCTGGGTC
JMFS141C12+ GCCCAAAAATGAAAAATCCCACTTGTCTTCCCAAGTGGATAAGCCTAGAGATTCTGGGTC
JMFS057C05+ GCCCAAAAATGAAAAATCCCACTTGTCTTCCCAAGTGGATAAGCCTAGAGATTCTGGGTC
JMFS011E11+ GCCCAAAAATGAAAAATCCCACTTGTCTTCCCAAGTGGATAAGCCTAGAGATTCTGGGTC
____________________________________________________________
consensus GCCCAAAAATGAAAAATCCCACTTGTCTTCCCAAGTGGATAAGCCTAGAGATTCTGGGTC
. : . : . : . : . : . :
JMFS108A08+ ACCACAACCGA
JMFS094C02+ ACCACAACCGACGGTGCCATGTAAGAACCCACGAACTAGGAACAGCACATGAATTCACCA
JMSF026M03+ ACCACAACCGACGGTGCCATGTAAGAACCCACGAACTAGGAACAGCACATGAATTCACCA
JMFS141C12+ ACCACAACCGACGGTGCCATGTAAGAACCCACGAACTAGGAACAGCACATGAATTCACCA
JMFS057C05+ ACCACAACCGACGGTGCCATGTAAGAACCCACGAACTAGGAACAGCACATGAATTCACCA
JMFS011E11+ ACCACAACCGACGGTGCCATGTAAGAACCCACGAACTAGGAACAGCACATGAATTCACCA
____________________________________________________________
consensus ACCACAACCGACGGTGCCATGTAAGAACCCACGAACTAGGAACAGCACATGAATTCACCA
. : . : . : . : . : . :
JMFS094C02+ TTAAAGCAACCACCTAAC
JMSF026M03+ TTAAAGCAACCACCTAACTCACATAGGAAAATCCAAAAGAATACCATTCAATTTCAAGGC
JMFS141C12+ TTAAAGCAACCACCTAACTCACATAGGAAAATCCAAAAGAATACCATTCAATTTCAAGGC
JMFS057C05+ TTAAAGCAACCACCTAACTCACATAGGAAAATCCAAAAGAATACCATTCAATTTCAAGGC
JMFS011E11+ TTAAAGCAACCACCTAACTCACATAGGAAAATCCAAAAGAATACCATTCAATTTCAAGGC
____________________________________________________________
consensus TTAAAGCAACCACCTAACTCACATAGGAAAATCCAAAAGAATACCATTCAATTTCAAGGC
. : . : . : . : . : . :
JMSF026M03+ CCCAACTACACCTCAGAGGCACAGAGGAGAGAGAGAGACCTG
JMFS141C12+ CCCAACTACACCTCAGAGGCACAGAGGAGAGAGAGAGACCTGTGAAGTTGAAGTATAGTA
JMFS057C05+ CCCAACTACACCTCAGAGGCACAGAGGAGAGAGAGAGACCTGTGAAGTTGAAGTATAGTA
JMFS011E11+ CCCAACTACACCTCAGAGGCACAGAGGAGAGAGAGAGACCTGTGAAGTTGAAGTATAGTA
____________________________________________________________
consensus CCCAACTACACCTCAGAGGCACAGAGGAGAGAGAGAGACCTGTGAAGTTGAAGTATAGTA
. : . : . : . : . : . :
JMFS141C12+ GACTTTACGTAAAATAGCGGGTAACCTGCTAACCACTACTACGATACTACCCAGGGA
JMFS057C05+ GACTTTACGTAAAATAGCGGGTAACCTGCTAACCACTACTACGATACTACCCAGGGATAG
JMFS011E11+ GACTTTACGTAAAATAGCGGGTAACCTGCTAACCACTACTACGATACTACCCAGGGATAG
____________________________________________________________
consensus GACTTTACGTAAAATAGCGGGTAACCTGCTAACCACTACTACGATACTACCCAGGGATAG
. : . : . : . : . : . :
JMFS057C05+ AAGATTGGAA
JMFS011E11+ AAGATTGGAAGTACXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATGGAA
____________________________________________________________
consensus AAGATTGGAAGTACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATGGAA
. : . : . : . : . : . :
JMFS011E11+ CCGAAATAAAGAAGAAAAGGGTATATAGGGAGGATTGAGGAAGCATCCAAAAGCGCAGAC
____________________________________________________________
consensus CCGAAATAAAGAAGAAAAGGGTATATAGGGAGGATTGAGGAAGCATCCAAAAGCGCAGAC