Contig 010406:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMFS009B01+                                             ACGAACTTCAAAATTTTCTATCTGCA
                      ____________________________________________________________
consensus                                               ACGAACTTCAAAATTTTCTATCTGCA
 
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JMFS009B01+           TAATAATAATTTTGAACTACAAAATTCTCTAAATAATAATTTTAGAACACCAAAATCTCC
                      ____________________________________________________________
consensus             TAATAATAATTTTGAACTACAAAATTCTCTAAATAATAATTTTAGAACACCAAAATCTCC
 
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JMFS009B01+           CTTAAGCCGACAGTTCAGTTCTTCACTAATTACTAAATAATTTTGCAAATTTGXXXXXXX
                      ____________________________________________________________
consensus             CTTAAGCCGACAGTTCAGTTCTTCACTAATTACTAAATAATTTTGCAAATTTGNNNNNNN
 
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JMFF021P13+                         TCCCATTCCCTCGGCAATTTGGTAGGATTCTGAAATGACCCAAAAA
JMFS009B01+           XXXXXXXXXXXXXXTCCCATTCCCTCGGCAATTTGGTAGGATTCTGAAATGACCCAAAAA
                      ____________________________________________________________
consensus             NNNNNNNNNNNNNNTCCCATTCCCTCGGCAATTTGGTAGGATTCTGAAATGACCCAAAAA
 
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JMFF021P13+           AAGAGGAAAAAACATGAATTTAAATTAATAATAAAGAAAATCAAATGCAAACATCCCATA
JMFS009B01+           AAGAGGAAAAAACATGAATTTAAATTAATAATAAAGAAAATCAAATGCAAACATCCCATA
                      ____________________________________________________________
consensus             AAGAGGAAAAAACATGAATTTAAATTAATAATAAAGAAAATCAAATGCAAACATCCCATA
 
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JMFF021P13+           TACAAATTTAACAGGAAAAGGGGATTCAAACATGTTTATGACCAAAAACAGTATTCAAAC
JMFS009B01+           TACAAATTTAACAGGAAAAGGGGATTCAAACATGTTTATGACCAAAAACAGTATTCAAAC
                      ____________________________________________________________
consensus             TACAAATTTAACAGGAAAAGGGGATTCAAACATGTTTATGACCAAAAACAGTATTCAAAC
 
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JMFF021P13+           AAAGAAATACAGTAAGCAGATCTGAGCAAACCAGCTTCCAAACAAAAGCATTAACTCCAC
JMFS009B01+           AAAGAAATACAGTAAGCAGATCTGAGCAAACCAGCTTCCAAACAAAAGCATTAACTCCAC
                      ____________________________________________________________
consensus             AAAGAAATACAGTAAGCAGATCTGAGCAAACCAGCTTCCAAACAAAAGCATTAACTCCAC
 
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JMFF021P13+           ATCCCACTCAACAATACCAAAAAAATAAAAATTAAAAATTAAAAACCAGCAACTTCCCCC
JMFS009B01+           ATCCCACTCAACAATACCAAAAAAATAAAAATTAAAAATTAAAAACCAGCAACTTCCCCC
                      ____________________________________________________________
consensus             ATCCCACTCAACAATACCAAAAAAATAAAAATTAAAAATTAAAAACCAGCAACTTCCCCC
 
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JMFF021P13+           ATTCAAGCGTATACCATCCGAAGCTTCCTATCAAACAGCTCACTCATACACAAACCTCAA
JMFS009B01+           ATTCAAGCGTATACCATCCGAAGCTTCCTATCAAACAGCTCACTCATACACAAACCTCAA
                      ____________________________________________________________
consensus             ATTCAAGCGTATACCATCCGAAGCTTCCTATCAAACAGCTCACTCATACACAAACCTCAA
 
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JMFF021P13+           AATTCATTGAAATTGAAA                                          
JMFS009B01+           AATTCATTGAAATTGAAACAAAAGCACACCTTTTTCAGCATAAAATCCTCTAGAATACAC
                      ____________________________________________________________
consensus             AATTCATTGAAATTGAAACAAAAGCACACCTTTTTCAGCATAAAATCCTCTAGAATACAC