Contig 010404:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS007A05Sequence475010404 (2)ref|XP_009624301.1|3e-10PREDICTED: kinesin-4-like [Nicotiana tomentosiformis] ref|XP_009624309.1| PREDIC
JMFS109H12Sequence627010404 (2)ref|XP_009624301.1|3e-89PREDICTED: kinesin-4-like [Nicotiana tomentosiformis] ref|XP_009624309.1| PREDIC

Alignment

This contig is upended


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JMFS109H12+             CACATGTGGTGGTGGGTTTTACATTTCCACCGAATTTCCAGACACCAATGCCACCTGA
                      ____________________________________________________________
consensus               CACATGTGGTGGTGGGTTTTACATTTCCACCGAATTTCCAGACACCAATGCCACCTGA
 
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JMFS109H12+           CTGCTTCCATTCACTGTAGGATTTGAGACCCAAAACACAGTTGACAATCCTAGAAGATGC
                      ____________________________________________________________
consensus             CTGCTTCCATTCACTGTAGGATTTGAGACCCAAAACACAGTTGACAATCCTAGAAGATGC
 
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JMFS109H12+           CCCACCTTGCTCAAGATCAGATGCCTCAAAAGTGGGTATTCCTACTTCTTGAACTGCCAC
                      ____________________________________________________________
consensus             CCCACCTTGCTCAAGATCAGATGCCTCAAAAGTGGGTATTCCTACTTCTTGAACTGCCAC
 
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JMFS109H12+           CAGAAAGTTCCTCACATTCTCAAAGTATTGATATGCAGACAAAGCTGCCCCATCAGGGAG
                      ____________________________________________________________
consensus             CAGAAAGTTCCTCACATTCTCAAAGTATTGATATGCAGACAAAGCTGCCCCATCAGGGAG
 
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JMFS109H12+           CAATGCAGCATCACTAGGGCTTTCAACCACCTTGGGAACAGCTCCAGGTTGAATCTTATT
                      ____________________________________________________________
consensus             CAATGCAGCATCACTAGGGCTTTCAACCACCTTGGGAACAGCTCCAGGTTGAATCTTATT
 
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JMFS109H12+           GAGTACATTGCATAGAACAATTCCACTCCTTAAGCCCAGTCTGAACTCTTCCTCAGAGGG
                      ____________________________________________________________
consensus             GAGTACATTGCATAGAACAATTCCACTCCTTAAGCCCAGTCTGAACTCTTCCTCAGAGGG
 
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JMFS109H12+           CTCTGCAGGCAAATCCTTTGCCCCCACCACTCCCACCATCTTTCTCAGCCATGCCGCTGC
JMFS007A05+                CAGGCAAATCCTTTGCCCCCACCACTCCCACCATCTTTCTCAGCCATGCCGCTGC
                      ____________________________________________________________
consensus             CTCTGCAGGCAAATCCTTTGCCCCCACCACTCCCACCATCTTTCTCAGCCATGCCGCTGC
 
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JMFS109H12+           TTCATATCTCCTTATTGCGGCTTCTTCGGCTCGACGGGCGTCCAAATCGAGACCCCGCGA
JMFS007A05+           TTCATATCTCCTTATTGCGGCTTCTTCGGCTCGACGGGCGTCCAAATCGAGACCCCGCGA
                      ____________________________________________________________
consensus             TTCATATCTCCTTATTGCGGCTTCTTCGGCTCGACGGGCGTCCAAATCGAGACCCCGCGA
 
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JMFS109H12+           TCGGGTCCCGTGCTGCTGAAGAACATCCTCCACCACGGACACAACCGAAAACGAGAATGC
JMFS007A05+           TCGGGTCCCGTGCTGCTGAAGAACATCCTCCACCACGGACACAACCGAAAACGAGAATGC
                      ____________________________________________________________
consensus             TCGGGTCCCGTGCTGCTGAAGAACATCCTCCACCACGGACACAACCGAAAACGAGAATGC
 
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JMFS109H12+           TCCATCGGCCGCCATTTTATTTTAGATAAACTAAAAACAAAAACGAGATATTATCTCAAG
JMFS007A05+           TCCATCGGCCGCCATTTTATTTTAGATAAACTAAAAACAAAAACGAGATATTATCTCAAG
                      ____________________________________________________________
consensus             TCCATCGGCCGCCATTTTATTTTAGATAAACTAAAAACAAAAACGAGATATTATCTCAAG
 
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JMFS109H12+           AATCGATGATTCCCTGATCGGAATGGAAA                               
JMFS007A05+           AATCGATGATTCCCTGATCGGAATGGAAACTTCAAGCTCCCAACATCAGGTAGGATTGCA
                      ____________________________________________________________
consensus             AATCGATGATTCCCTGATCGGAATGGAAACTTCAAGCTCCCAACATCAGGTAGGATTGCA
 
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JMFS007A05+           AAATCTTGGGAAATTAAGAAGCTTTGAAAAGGAAAGGTGCGGTTGCAGAAATGGAAGTTT
                      ____________________________________________________________
consensus             AAATCTTGGGAAATTAAGAAGCTTTGAAAAGGAAAGGTGCGGTTGCAGAAATGGAAGTTT
 
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JMFS007A05+           CTTGTACGCTACTGCTCCAGAAGATTAGTCCCTCCCTGTAACTTTGCACACTATGCTGGG
                      ____________________________________________________________
consensus             CTTGTACGCTACTGCTCCAGAAGATTAGTCCCTCCCTGTAACTTTGCACACTATGCTGGG
 
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JMFS007A05+           CTGGCTAGCACTCTTCTTTTTCCCTTTCCCCACTTCCCCTTTCCCTCTCTCTCTCTCTCT
                      ____________________________________________________________
consensus             CTGGCTAGCACTCTTCTTTTTCCCTTTCCCCACTTCCCCTTTCCCTCTCTCTCTCTCTCT