Contig 010403:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS006E01Sequence567010403 (2)ref|XP_004160275.1|6e-10PREDICTED: putative beta-glucosidase 41-like [Cucumis sativus]
JMSF035G23Sequence726010403 (2)ref|XP_004244167.1|6e-31PREDICTED: putative beta-glucosidase 41 [Solanum lycopersicum]617020457ref|XP_006360112.1|7e-66PREDICTED: putative beta-glucosidase 41-like [Solanum tuberosum]

Alignment

This contig is upended


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JMSF035G23+                                                CTCTAGTAAAGCATCTATGAGAT
                      ____________________________________________________________
consensus                                                  CTCTAGTAAAGCATCTATGAGAT
 
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JMSF035G23+           TATTGTAGTACTCTATTCCTTTNGGATTTGGTTCTCCAGTACCATTTGGGAAAATTCTTG
                      ____________________________________________________________
consensus             TATTGTAGTACTCTATTCCTTTNGGATTTGGTTCTCCAGTACCATTTGGGAAAATTCTTG
 
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JMSF035G23+           TCCATGAAATAGAGAATCTGTAAGCATCCATTCCCAAGTCCTTCATCAAGTCTATGTCAC
                      ____________________________________________________________
consensus             TCCATGAAATAGAGAATCTGTAAGCATCCATTCCCAAGTCCTTCATCAAGTCTATGTCAC
 
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JMSF035G23+           CCTTCATTCAATTCAAGGTTACCTCATGGTAGTTAACAAGGGACAAAGATCATCAGAGGG
JMFS006E01+                                            TAACAAGGGACAAAGATCATCAGAGGG
                      ____________________________________________________________
consensus             CCTTCATTCAATTCAAGGTTACCTCATGGTAGTTAACAAGGGACAAAGATCATCAGAGGG
 
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JMSF035G23+           ACAGACTAGTAGACAAACATGATGCTTTTGAGAATTTTATTATTAATATATGTGGTCGGT
JMFS006E01+           GCAGACTAGTAGACAAACATGATGCTTTTGAGAATTTTATTATTAATATATGTGGTCGGT
                      ____________________________________________________________
consensus             GCAGACTAGTAGACAAACATGATGCTTTTGAGAATTTTATTATTAATATATGTGGTCGGT
 
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JMSF035G23+           TCTTAATTCTTATCTCATAATGTCGATTTGTCATCTGCAATTTTTTATTCTAAGCTATTA
JMFS006E01+           TCTTAATTCTTATCTCATAATGTCGATTTGTCATCTGCAATTTTTTATTCTAAGCTATTA
                      ____________________________________________________________
consensus             TCTTAATTCTTATCTCATAATGTCGATTTGTCATCTGCAATTTTTTATTCTAAGCTATTA
 
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JMSF035G23+           ATAGACTGTTTGACAAGATAGCCTTCCTTATCCAGAGCATTTAGCTCGCATGAGTAATTC
JMFS006E01+           ATAGACTGTTTGACAAGATAGCCTTCCTTATCCAGAGCATTTAGCTCGCATGAGTAATTC
                      ____________________________________________________________
consensus             ATAGACTGTTTGACAAGATAGCCTTCCTTATCCAGAGCATTTAGCTCGCATGAGTAATTC
 
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JMSF035G23+           AGTTGGTTCTTGAATAATAGATTGTGAGCAAGTATCAAAACAACATAATAATACCCGAAA
JMFS006E01+           AGTTGGTTCTTGAATAATAGATTGTGAGCAAGTATCAAAACAACATAATAATACCCGAAA
                      ____________________________________________________________
consensus             AGTTGGTTCTTGAATAATAGATTGTGAGCAAGTATCAAAACAACATAATAATACCCGAAA
 
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JMSF035G23+           CCGATGATATTGATCAACTGTTGTGTTTGCATTGCTAAAGTCCAGAATTCTTCCTG    
JMFS006E01+           CCGATGATATTGATCAACTGTTGTGTTTGCATTGCTAAAGTCCAGAATTCTTCCTGTTTA
                      ____________________________________________________________
consensus             CCGATGATATTGATCAACTGTTGTGTTTGCATTGCTAAAGTCCAGAATTCTTCCTGTTTA
 
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JMFS006E01+           TTAAACATATATAATTCAGAAAAAAAAAAAAACAAAAAAAACCCATGATTTTGCATTGCT
                      ____________________________________________________________
consensus             TTAAACATATATAATTCAGAAAAAAAAAAAAACAAAAAAAACCCATGATTTTGCATTGCT
 
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JMFS006E01+           TAATAAATGGCAGCAGAAGAAGTTTATACGTACCTGGTTTGTTGGAGAAGGTATCCCAGA
                      ____________________________________________________________
consensus             TAATAAATGGCAGCAGAAGAAGTTTATACGTACCTGGTTTGTTGGAGAAGGTATCCCAGA
 
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JMFS006E01+           TGCTGGGTCCTTTGTTTCCTTCATCCACAGCGCCCTCGAACTATATATGAAACCCAAGTT
                      ____________________________________________________________
consensus             TGCTGGGTCCTTTGTTTCCTTCATCCACAGCGCCCTCGAACTATATATGAAACCCAAGTT
 
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JMFS006E01+           GAACAGTAAAAATGGAGGATATAAGAAGATAGACATGAAAGGGAAAAACAGGGAAGAAAA
                      ____________________________________________________________
consensus             GAACAGTAAAAATGGAGGATATAAGAAGATAGACATGAAAGGGAAAAACAGGGAAGAAAA