Contig 010402:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS003E05Sequence580010402 (2)emb|CDP08003.1|2e-23unnamed protein product [Coffea canephora]
JMFS028G12Sequence635010402 (2)emb|CDP08003.1|2e-28unnamed protein product [Coffea canephora]

Alignment

This contig is upended


. : . : . : . : . : . :
JMFS028G12+ ATTGTTACTATCTACAGTGTCCATTAAACTGCAGTCTCTTA
                      ____________________________________________________________
consensus ATTGTTACTATCTACAGTGTCCATTAAACTGCAGTCTCTTA
 
. : . : . : . : . : . :
JMFS028G12+ ATTTGATGTTGAGATTGGAAATCTGATCCTGCAAATCAATAACTTGATGGTGTAACGAAA
JMFS003E05+ AATCTGATCCTGCAAATCAATAACTTGATGGTGTAACGAAA
                      ____________________________________________________________
consensus ATTTGATGTTGAGATTGGAAATCTGATCCTGCAAATCAATAACTTGATGGTGTAACGAAA
 
. : . : . : . : . : . :
JMFS028G12+ AGTTTTTGTGAAGCAACAAAGAAAATGCAGTCATCAATATTATGATTGAAAATGCCGTCT
JMFS003E05+ AGTTTTTGTGAAGCAACAAAGAAAATGCAGTCATCAATATTATGATTGAAAATGCCGTCT
                      ____________________________________________________________
consensus AGTTTTTGTGAAGCAACAAAGAAAATGCAGTCATCAATATTATGATTGAAAATGCCGTCT
 
. : . : . : . : . : . :
JMFS028G12+ GCCAGCGAATGTTGAACCTTCGACCAAACAATACGGCGAATTTCTTTCCATGCGACTTCA
JMFS003E05+ GCCAGCGAATGTTGAACCTTCGACCAAACAATACGGCGAATTTCTTTCCATGCGACTTCA
                      ____________________________________________________________
consensus GCCAGCGAATGTTGAACCTTCGACCAAACAATACGGCGAATTTCTTTCCATGCGACTTCA
 
. : . : . : . : . : . :
JMFS028G12+ ATTTGACTTCTGGAGCCTGACATTTCTCTTGCTCAATAGCCTTCTCACCGCCATTGCTAA
JMFS003E05+ ATTTGACTTCTGGAGCCTGACATTTCTCTTGCTCAATAGCCTTCTCACCGCCATTGCTAA
                      ____________________________________________________________
consensus ATTTGACTTCTGGAGCCTGACATTTCTCTTGCTCAATAGCCTTCTCACCGCCATTGCTAA
 
. : . : . : . : . : . :
JMFS028G12+ GATGATTGGTAGTTGTTGTTGTTGACTTGTCGTTGTGGGAGTCGCCATGGGGGTAAAGAC
JMFS003E05+ GATGATTGGTAGTTGTTGTTGTTGACTTGTCGTTGTGGGAGTCGCCATGGGGGTAAAGAC
                      ____________________________________________________________
consensus GATGATTGGTAGTTGTTGTTGTTGACTTGTCGTTGTGGGAGTCGCCATGGGGGTAAAGAC
 
. : . : . : . : . : . :
JMFS028G12+ GACGCCGTATTCCGGCGTACTTTCGAGACACAGCAAGGGGACTCGGATTCGGCAACGACG
JMFS003E05+ GACGCCGTATTCCGGCGTACTTTCGAGACACAGCAAGGGGACTCGGATTCGGCAACGACG
                      ____________________________________________________________
consensus GACGCCGTATTCCGGCGTACTTTCGAGACACAGCAAGGGGACTCGGATTCGGCAACGACG
 
. : . : . : . : . : . :
JMFS028G12+ TTGTCCGCGGGTATGGAGAGGAAAATCGCCGGGCGGGAGTTCGTGTAAGGTGGGAGGAAT
JMFS003E05+ TTGTCCGCGGGTATGGAGAGGAAAATCGCCGGGCGGGAGTTCGTGTAAGGTGGGAGGAAT
                      ____________________________________________________________
consensus TTGTCCGCGGGTATGGAGAGGAAAATCGCCGGGCGGGAGTTCGTGTAAGGTGGGAGGAAT
 
. : . : . : . : . : . :
JMFS028G12+ GCGTGAAAGCATGTGAGGGGAAAAACCAGTCTCTACCGCCGTCGCTACCGGCGGTAGTGG
JMFS003E05+ GCGTGAAAGCATGTGAGGGGAAAAACCAGTCTCTACCGCCGTCGCTACCGGCGGTAGTGG
                      ____________________________________________________________
consensus GCGTGAAAGCATGTGAGGGGAAAAACCAGTCTCTACCGCCGTCGCTACCGGCGGTAGTGG
 
. : . : . : . : . : . :
JMFS028G12+ TGGTAGATGACTGTGGAACGGAGTCAATGGTGGACATGGCGACAACACAGGAAAAGGACT
JMFS003E05+ TGGTAGA-GACTGTGGAACGGAGTCAATGGTGGACATGGCGACAACACAGGAAAAGGACT
                      ____________________________________________________________
consensus TGGTAGATGACTGTGGAACGGAGTCAATGGTGGACATGGCGACAACACAGGAAAAGGACT
 
. : . : . : . : . : . :
JMFS028G12+ TGGTAGCCTTCTTGGACGACCGGCCCCTTTCTTTGGAAAATGCTCCCAGGACGA
JMFS003E05+ TGGTAGCCTTCTTGGACGACCGGCCCCTTTCTTTGGAAAATGCTCCCAGGACGAATATAC
                      ____________________________________________________________
consensus TGGTAGCCTTCTTGGACGACCGGCCCCTTTCTTTGGAAAATGCTCCCAGGACGAATATAC