| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFN003A14 | Sequence | 587 | 010397 (8) | ref|XP_004243641.1| | 2e-72 | PREDICTED: 60S ribosomal protein L27-3 [Solanum lycopersicum] ref|XP_006357877.1 | |||||
| JMFN011J24 | Sequence | 573 | 010397 (8) | ref|XP_004243641.1| | 2e-72 | PREDICTED: 60S ribosomal protein L27-3 [Solanum lycopersicum] ref|XP_006357877.1 | |||||
| JMFN043G05 | Sequence | 591 | 010397 (8) | ref|XP_004243641.1| | 3e-72 | PREDICTED: 60S ribosomal protein L27-3 [Solanum lycopersicum] ref|XP_006357877.1 | |||||
| JMSF001C23 | Sequence | 383 | 006477 (10) | gb|EYU24699.1| | 3e-51 | hypothetical protein MIMGU_mgv1a017069mg [Erythranthe guttata] | 535 | 010397 (8) | ref|XP_004243641.1| | 4e-72 | PREDICTED: 60S ribosomal protein L27-3 [Solanum lycopersicum] ref|XP_006357877.1 |
| JMSF003O04 | Sequence | 312 | 010397 (8) | gb|EYU33768.1| | 5e-51 | hypothetical protein MIMGU_mgv1a016080mg [Erythranthe guttata] | 556 | 010397 (8) | ref|XP_004243641.1| | 6e-73 | PREDICTED: 60S ribosomal protein L27-3 [Solanum lycopersicum] ref|XP_006357877.1 |
| JMSF019H17 | Sequence | 492 | 010397 (8) | ref|XP_004243641.1| | 3e-73 | PREDICTED: 60S ribosomal protein L27-3 [Solanum lycopersicum] ref|XP_006357877.1 | 560 | 010397 (8) | ref|XP_004243641.1| | 6e-73 | PREDICTED: 60S ribosomal protein L27-3 [Solanum lycopersicum] ref|XP_006357877.1 |
This contig is upended
. : . : . : . : . : . :
JMSF019H17- GTTTCATTTTCGTCTCGCAGCAGTAAGCAGCGGC
JMSF003O04- GTTTCATTTTCGTCTCGCAGCAGTAAGCAGCGGC
rJMSF003O04+ GAGGGTTTCATTTTCGTCTCGCAGCAGTAAGCAGCGGC
rJMSF001C23+ CTCGCAGCAGTAAGCAGCGGC
rJMSF019H17+ GTTTCATTTTCGTCTCGCAGCAGTAAGCAGCGGC
JMFN003A14- TCGCAGCAGTAAGCAGCGGC
JMFN011J24- AGCGGC
____________________________________________________________
consensus GAGGGTTTCATTTTCGTCTCGCAGCAGTAAGCAGCGGC
. : . : . : . : . : . :
JMSF019H17- GGCTAGCGTCGAAAATGGTGAAATTTCTCAAGCCTAACAAGGCCGTTATTCTCCTTCAGG
JMSF003O04- GGCTAGCGTCGAAAATGGTGAAATTTCTCAAGCCTAACAAGGCCGTTATTCTCCTTCAGG
rJMSF003O04+ GGCTAGCGTCGAAAATGGTGAAATTTCTCAAGCCTAACAAGGCCGTTATTCTCCTTCAGG
rJMSF001C23+ GGCTAGCGTCGAAAATGGTGAAATTTCTCAAGCCTAACAAGGCCGTTATTCTCCTTCAGG
rJMSF019H17+ GGCTAGCGTCGAAAATGGTGAAATTTCTCAAGCCTAACAAGGCCGTTATTCTCCTTCAGG
JMFN003A14- GGCTAGCGTCGAAAATGGTGAAATTTCTCAAGCCTAACAAGGCCGTTATTCTCCTTCAGG
JMFN011J24- GGCTAGCGTCGAAAATGGTGAAATTTCTCAAGCCTAACAAGGCCGTTATTCTCCTTCAGG
JMFN043G05+ CGAAAATGGTGAAATTTCTCAAGCCTAACAAGGCCGTTATTCTCCTTCAGG
____________________________________________________________
consensus GGCTAGCGTCGAAAATGGTGAAATTTCTCAAGCCTAACAAGGCCGTTATTCTCCTTCAGG
. : . : . : . : . : . :
JMSF019H17- GCCGCTATGCCGGCAAGAAGGCGGTCATCGTGAAGTCCTTCGACGACGGCACTCGCGATC
JMSF003O04- GCCGCTATGCCGGCAAGAAGGCGGTCATCGTGAAGTCCTTCGACGACGGCACTCGCGATC
rJMSF003O04+ GCCGCTATGCCGGCAAGAAGGCGGTCATCGTGAAGTCCTTCGACGACGGCACTCGCGATC
rJMSF001C23+ GCCGCTATGCCGGCAAGAAGGCGGTCATCGTGAAGTCCTTCGACGACGGCACTCGCGATC
rJMSF019H17+ GCCGCTATGCCGGCAAGAAGGCGGTCATCGTGAAGTCCTTCGACGACGGCACTCGCGATC
JMFN003A14- GCCGCTATGCCGGCAAGAAGGCGGTCATCGTGAAGTCCTTCGACGACGGCACTCGCGATC
JMFN011J24- GCCGCTATGCCGGCAAGAAGGCGGTCATCGTGAAGTCCTTCGACGACGGCACTCGCGATC
JMFN043G05+ GCCGCTATGCCGGCAAGAAGGCGGTCATCGTGAAGTCCTTCGACGACGGCACTCGCGATC
____________________________________________________________
consensus GCCGCTATGCCGGCAAGAAGGCGGTCATCGTGAAGTCCTTCGACGACGGCACTCGCGATC
. : . : . : . : . : . :
JMSF019H17- GCCCCTACGGCCACTGCCTTGTCGCCGGGATCGCCAAGTATCCGAGCAAGGTGATCCGCA
JMSF003O04- GCCCCTACGGCCACTGCCTTGTCGCCGGGATCGCCAAGTATCCGAGCAAGGTGATCCGCA
rJMSF003O04+ GCCCCTACGGCCACTGCCTTGTCGCCGGGATCGCCAAGTATCCGAGCAAGGTGATCCGCA
rJMSF001C23+ GCCCCTACGGNCACTGCCTTGTCGCCGGGATCGCCAAGTATCCGAGCAAGGTGATCCGCA
rJMSF019H17+ GCCCCTACGGCCACTGCCTTGTCGCCGGGATCGCCAAGTATCCGAGCAAGGTGATCCGCA
JMFN003A14- GCCCCTACGGCCACTGCCTTGTCGCCGGGATCGCCAAGTATCCGAGCAAGGTGATCCGCA
JMFN011J24- GCCCCTACGGCCACTGCCTTGTCGCCGGGATCGCCAAGTATCCGAGCAAGGTGATCCGCA
JMFN043G05+ GCCCCTACGGCCACTGCCTTGTCGCCGGGATCGCCAAGTATCCGAGCAAGGTGATCCGCA
____________________________________________________________
consensus GCCCCTACGGCCACTGCCTTGTCGCCGGGATCGCCAAGTATCCGAGCAAGGTGATCCGCA
. : . : . : . : . : . :
JMSF019H17- AGGACTCCGCCAAGAAGCAGGCGAAGAAGTCTCGCGTGAGGACTTTCGTCAAGCTCGTTA
JMSF003O04- AGGACTCCGCCAAGAAGCAGGCGAAGAAGTCTCGCGTGAGGACTTTCGTCAAGCTCGTTA
rJMSF003O04+ AGGACTCCGCCAAGAAGCAGGCGAAGAAGTCTCGCGTGAGGACTTTCGTCAAGCTCGTTA
rJMSF001C23+ AGGACTCCGCCAAGAAGCAGGCGAAGAAGTCTCGCGTGAGGACTTTCGTCAAGCTCGTTA
rJMSF019H17+ AGGACTCCGCCAAGAAGCAGGCGAAGAAGTCTCGCGTGAGGACTTTCGTCAAGCTCGTTA
JMFN003A14- AGGACTCCGCCAAGAAGCAGGCGAAGAAGTCTCGCGTGAGGACTTTCGTCAAGCTCGTTA
JMFN011J24- AGGACTCCGCCAAGAAGCAGGCGAAGAAGTCTCGCGTGAGGACTTTCGTCAAGCTCGTTA
JMFN043G05+ AGGACTCCGCCAAGAAGCAGGCGAAGAAGTCTCGCGTGAGGACTTTCGTCAAGCTCGTTA
____________________________________________________________
consensus AGGACTCCGCCAAGAAGCAGGCGAAGAAGTCTCGCGTGAGGACTTTCGTCAAGCTCGTTA
. : . : . : . : . : . :
JMSF019H17- ACTACAACCACATTATGCCGACGCGCTACACCCTGGACGTTGACCTGAAAGACGCCGTCA
JMSF003O04- ACTACAACCACATTATGCCGACGCGCTACACCC
rJMSF003O04+ ACTACAACCACATTATGCCGACGCGCTACACCCTGGACGTTGACCTGAAAGACGCCGTCA
rJMSF001C23+ ACTACAACCACATTATGCCGACGCGCTACACCCTGGACGTTGACCTGAAAGACGCCGTCA
rJMSF019H17+ ACTACAACCACATTATGCCGACGCGCTACACCCTGGACGTTGACCTGAAAGACGCCGTCA
JMFN003A14- ACTACAACCACATTATGCCGACGCGCTACACCCTGGACGTTGACCTGAAAGACGCCGTCA
JMFN011J24- ACTACAACCACATTATGCCGACGCGCTACACCCTGGACGTTGACCTGAAAGACGCCGTCA
JMFN043G05+ ACTACAACCACATTATGCCGACGCGCTACACCCTGGACGTTGACCTGAAAGACGCCGTCA
____________________________________________________________
consensus ACTACAACCACATTATGCCGACGCGCTACACCCTGGACGTTGACCTGAAAGACGCCGTCA
. : . : . : . : . : . :
JMSF019H17- CCCCCGACTGCCTTCAGTCGCGGGACAAGAGAGTCGCTGCCGCGAAAGAGGCGAAAGCTC
rJMSF003O04+ CCCCCGACTGCCTTCAGTCGCGGGACAAGAGAGTCGCTGCCGCGAAAGAGGCGAAAGCTC
rJMSF001C23+ CCCCCGACTGCCTTCAGTCGCGGGACAAGAGAGTCGCTGCCGCGAAAGAGGCGAAAGCTC
rJMSF019H17+ CCCCCGACTGCCTTCAGTCGCGGGACAAGAGAGTCGCTGCCGCGAAAGAGGCGAAAGCTC
JMFN003A14- CCCCCGACTGCCTTCAGTCGCGGGACAAGAGAGTCGCTGCCGCGAAAGAGGCGAAAGCTC
JMFN011J24- CCCCCGACTGCCTTCAGTCGCGGGACAAGAGAGTCGCTGCCGCGAAAGAGGCGAAAGCTC
JMFN043G05+ CCCCCGACTGCCTTCAGTCGCGGGACAAGAGAGTCGCTGCCGCGAAAGAGGCGAAAGCTC
____________________________________________________________
consensus CCCCCGACTGCCTTCAGTCGCGGGACAAGAGAGTCGCTGCCGCGAAAGAGGCGAAAGCTC
. : . : . : . : . : . :
JMSF019H17- GTCTCGAAGATCGGTTCAAAACTGGGAAGAACAGGTGGTTCTTTTCCAAACTCAGGTTCT
rJMSF003O04+ GTCTCGAAGATCGGTTCAAAACTGGGAAGAACAGGTGGTTCTTTTCCAAACTCAGGTTCT
rJMSF001C23+ GTCTCGAAGATCGGTTCAAAACTGGGAAGAACAGGTGGTTCTTTTCCAAACTCAGGTTGT
rJMSF019H17+ GTCTCGAAGATCGGTTCAAAACTGGGAAGAACAGGTGGTTCTTTTCCAAACTCAGGTTCT
JMFN003A14- GTCTCGAAGATCGGTTCAAAACTGGGAAGAACAGGTGGTTCTTTTCCAAACTCAGGTTCT
JMFN011J24- GTCTCGAAGATCGGTTCAAAACTGGGAAGAACAGGTGGTTCTTTTCCAAACTCAGGTTCT
JMFN043G05+ GTCTCGAAGATCGGTTCAAAACTGGGAAGAACAGGTGGTTCTTTTCCAAACTCAGGTTCT
____________________________________________________________
consensus GTCTCGAAGATCGGTTCAAAACTGGGAAGAACAGGTGGTTCTTTTCCAAACTCAGGTTCT
. : . : . : . : . : . :
JMSF019H17- GAGTAGATCAATACATAAATACTCTCAGCCTATG
rJMSF003O04+ GAGTAGATCAATACATAAATACTCTCAGCCTATGAGCTTTTTGTCTGTTTCTCTTAGTAA
rJMSF001C23+ GAGTAGATCAATACATAAATACTCTCAGCCTATGAGCTTTTTGTCTGTTTCTCTTAGTAA
rJMSF019H17+ GAGTAGATCAATACATAAATACTCTCAGCCTATGAGCTTTTTGTCTGTTTCTCTTAGTAA
JMFN003A14- GAGTAGATCAATACATAAATACTCTCAGCCTATGAGCTTTTTGTCTGTTTCTCTTAGTAA
JMFN011J24- GAGTAGATCAATACATAAATACTCTCAGCCTATGAGCCTTTTGTCTGTTTCTCTTAGTAA
JMFN043G05+ GAGTAGATCAATACATAAATACTCTCAGCCTATGAGCTTTTTGTCTGTTTCTCTTAGTAA
____________________________________________________________
consensus GAGTAGATCAATACATAAATACTCTCAGCCTATGAGCTTTTTGTCTGTTTCTCTTAGTAA
. : . : . : . : . : . :
rJMSF003O04+ TTTTTTCAACTGGATTTTGTTTACT
rJMSF001C23+ TTTTTTCAACTGGATTTTGTTTACTTGAAGATGT
rJMSF019H17+ TTTTTTCAACTGGATTTTGTTTACTTGAAGATGTTATCCTTA
JMFN003A14- TTTTTTCAACTGGATTTTGTTTACTTGAAGATGTTATCCTTATTATATGTGACAATCGAA
JMFN011J24- TTTTTTCAACTGGATTTTGTTTACTTGAAGATGTTATCCTTATTATATGTGACAATCGAA
JMFN043G05+ TTTTTTCAACTGGATTTTGTTTACTTGAAGATGTTATCCTTATTATATGTGACAATCGAA
____________________________________________________________
consensus TTTTTTCAACTGGATTTTGTTTACTTGAAGATGTTATCCTTATTATATGTGACAATCGAA
. : . : . : . : . : . :
JMFN003A14- TNTCTAATATATTTCATTTCTCTCGTT
JMFN011J24- TTTCTAATATATTTCATTTCTCTCGTT
JMFN043G05+ TTTCTAATATATTTCATTTCTCTCGTTXXXXXXXXXXXXXXXXXXXXXXCTCAGACTAGT
____________________________________________________________
consensus TTTCTAATATATTTCATTTCTCTCGTTNNNNNNNNNNNNNNNNNNNNNNCTCAGACTAGT