| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF037E04 | Sequence | 547 | 010395 (8) | emb|CDP15880.1| | 9e-37 | unnamed protein product [Coffea canephora] | 644 | 010395 (8) | ref|XP_010323755.1| | 7e-52 | PREDICTED: glutaredoxin-C9-like [Solanum lycopersicum] |
| JMFN007M11 | Sequence | 618 | 010395 (8) | ref|XP_010323755.1| | 5e-52 | PREDICTED: glutaredoxin-C9-like [Solanum lycopersicum] | |||||
| JMFN009L23 | Sequence | 614 | 010395 (8) | ref|XP_010323755.1| | 5e-52 | PREDICTED: glutaredoxin-C9-like [Solanum lycopersicum] | |||||
| JMFN014J16 | Sequence | 586 | 010395 (8) | ref|XP_010323755.1| | 2e-48 | PREDICTED: glutaredoxin-C9-like [Solanum lycopersicum] | |||||
| JMFN017D04 | Sequence | 325 | 010395 (8) | ref|XP_009594330.1| | 4e-22 | PREDICTED: glutaredoxin-C9-like [Nicotiana tomentosiformis] | |||||
| JMFN032N11 | Sequence | 614 | 010395 (8) | ref|XP_010323755.1| | 5e-52 | PREDICTED: glutaredoxin-C9-like [Solanum lycopersicum] | |||||
| JMFN042I16 | Sequence | 616 | 010395 (8) | ref|XP_010323755.1| | 5e-52 | PREDICTED: glutaredoxin-C9-like [Solanum lycopersicum] | |||||
This contig is upended
. : . : . : . : . : . :
JMFN017D04+ A
JMFN014J16+ ATAGTA
JMFN009L23+ A
JMFN032N11+ A
____________________________________________________________
consensus ATAGTA
. : . : . : . : . : . :
JMFN017D04+ ATTAATTACTCTGTAATTTATATATCCCAATAAAGGTTAATAACAGAGGAGGGGTGAAAA
JMFN014J16+ ATTAATTACTCTGTAATTTATATATCCCAATAAAGGTTAATAACAGAGGAGGGGTGAAAA
JMFN009L23+ ATTAATTACTCTGTAATTTATATATCCCAATAAAGGTTAATAACAGAGGAGGGGTGANAA
JMFN032N11+ ATTAATTACTCTGTAATTTATATATCCCAATAAAGGTTAATAACAGAGGAGGGGTGAAAA
JMFN007M11+ TATATATCCCAATAAAGGTTAATAACAGAGGAGGGGTGAAAA
rJMFF037E04- CTCTGTAATTTATATATCCCAATAAAGGTTAATAACAGAGGAGGGGTGAAAA
JMFN042I16+ CAGAGGAGGGGTGAAAA
____________________________________________________________
consensus ATTAATTACTCTGTAATTTATATATCCCAATAAAGGTTAATAACAGAGGAGGGGTGAAAA
. : . : . : . : . : . :
JMFN017D04+ AGAACAGAAAAAATTTTAACAGTCTGAAATAAAACTCTCAACGCCCTGTGTGAAAATTAG
JMFN014J16+ AGAACAGAAAAAATTTTAACAGTCTGAAATAAAACTCTCAACGCCCTGTGTGAAAATTAG
JMFN009L23+ AGAACAGAAAAAATTTTAACAGTCTGAAATAAAACTCTCAACGCCCTGTGTGAAAATTAG
JMFN032N11+ AGAACAGAAAAAATTTTAACAGTCTGAAATAAAACTCTCAACGCCCTGTGTGAAAATTAG
JMFN007M11+ AGAACAGAAAAAATTTTAACAGTCTGAAATAAAACTCTCAACGCCCTGTGTGAAAATTAG
JMFF037E04+ TGTGTGAAAATTAG
rJMFF037E04- AGAACAGAAAAAATTTTAACAGTCTGAAATAAAACTCTCAACGCCCTGTGTGAAAATTAG
JMFN042I16+ AGAACAGAAAAAATTTTAACAGTCTGAAATAAAACTCTCAACGCCCTGTGTGAAAATTAG
____________________________________________________________
consensus AGAACAGAAAAAATTTTAACAGTCTGAAATAAAACTCTCAACGCCCTGTGTGAAAATTAG
. : . : . : . : . : . :
JMFN017D04+ TACTCAGAAAAAGCATAATATCAAAGCCAAAGCGCGCCGGCGTCTTTCAGAATCGGAGTC
JMFN014J16+ TACTCAGAAAAAGCATAATATCAAAGCCAAAGCGCGCCGGCGTCTTTCAGAATCGGAGTC
JMFN009L23+ TACTCAGAAAAAGCATAATATCAAAGCCAAAGCGCGCCGGCGTCTTTCAGAATCGGAGTC
JMFN032N11+ TACTCAGAAAAAGCATAATATCAAAGCCAAAGCGCGCCGGCGTCTTTCAGAATCGGAGTC
JMFN007M11+ TACTCAGAAAAAGCATAATATCAAAGCCAAAGCGCGCCGGCGTCTTTCAGAATCGGAGTC
JMFF037E04+ TACTCAGAAAAAGCATAATATCAAAGCCAAAGCGCGCCGGCGTCTTTCAGAATCGGAGTC
rJMFF037E04- TACTCAGAAAAAGCATAATATCAAAGCCAAAGCGCGCCGGCGTCTTTCAGAATCGGAGTC
JMFN042I16+ TACTCAGAAAAAGCATAATATCAAAGCCAAAGCGCGCCGGCGTCTTTCAGAATCGGAGTC
____________________________________________________________
consensus TACTCAGAAAAAGCATAATATCAAAGCCAAAGCGCGCCGGCGTCTTTCAGAATCGGAGTC
. : . : . : . : . : . :
JMFN017D04+ AACTCGCCGGTGATATGAGCGCCCATAACCCGATCCAACCCGCCGAACAGCCGTCCTCCG
JMFN014J16+ AACTCGCCGGTGATATGAGCGCCCATAACCCGATCCAACCCGCCGAACAGCCGTCCTCCG
JMFN009L23+ AACTCGCCGGTGATATGAGCGCCCATAACCCGATCCAACCCGCCGAACAGCCGTCCTCCG
JMFN032N11+ AACTCGCCGGTGATATGAGCGCCCATAACCCGATCCAACCCGCCGAACAGCCGTCCTCCG
JMFN007M11+ AACTCGCCGGTGATATGAGCGCCCATAACCCGATCCAACCCGCCGAACAGCCGTCCTCCG
JMFF037E04+ AACTCGCCGGTGATATGAGCGCCCATAACCCGATCCAACCCGCCGAACAGCCGTCCTCCG
rJMFF037E04- AACTCGCCGGTGATATGAGCGCCCATAACCCGATCCAACCCGCCGAACAGCCGTCCTCCG
JMFN042I16+ AACTCGCCGGTGATATGAGCGCCCATAACCCGATCCAACCCGCCGAACAGCCGTCCTCCG
____________________________________________________________
consensus AACTCGCCGGTGATATGAGCGCCCATAACCCGATCCAACCCGCCGAACAGCCGTCCTCCG
. : . : . : . : . : . :
JMFN017D04+ ATGAACACCGTCGG-AAACTGCAACCGGCCGTCCTTCCGGTCAAAGGCGCTGATGGCTTC
JMFN014J16+ ATGAACACCGTCGG-AAACTGCAACCGGCCGTCCTTCCGGTCAAAGGCGCTGATGGCTTC
JMFN009L23+ ATGAACACCGTCGG-AAACTGCAACCGGCCGTCCTTCCGGTCAAAGGCGCTGATGGCTTC
JMFN032N11+ ATGAACACCGTCGG-AAACTGCAACCGGCCGTCCTTCCGGTCAAAGGCGCTGATGGCTTC
JMFN007M11+ ATGAACACCGTCGG-AAACTGCAACCGGCCGTCCTTCCGGTCAAAGGCGCTGATGGCTTC
JMFF037E04+ ATGAACACCGTCGGAAAACTGCAACCGGCCGTCCTTCCGGTCAAAGGCGCTGATGGCTTC
rJMFF037E04- ATGAACACCGTCGG-AAACTGCAACCGGCCGTCCTTCCGGTCAAAGGCGCTGATGGCTTC
JMFN042I16+ ATGAACACCGTCGG-AAACTGCAACCGGCCGTCCTTCCGGTCAAAGGCGCTGATGGCTTC
____________________________________________________________
consensus ATGAACACCGTCGG-AAACTGCAACCGGCCGTCCTTCCGGTCAAAGGCGCTGATGGCTTC
. : . : . : . : . : . :
JMFN017D04+ GAGCTCGTTAACGACGTCGTCTTCG
JMFN014J16+ GAGCTCGTTAACGACGTCGTCTTCGGACCCTTCATCGGTCTCGTAGATCGCCGGGTTGGC
JMFN009L23+ GAGCTCGTTAACGACGTCGTCTTCGGACCCTTCATCGGTCTCGTAGATCGCCGGGTTGGC
JMFN032N11+ GAGCTCGTTAACGACGTCGTCTTCGGACCCTTCATCGGTCTCGTAGATCGCCGGGTTGGC
JMFN007M11+ GAGCTCGTTAACGACGTCGTCTTCGGACCCTTCATCGGTCTCGTAGATCGCCGGGTTGGC
JMFF037E04+ GAGCTCGTTAACGACGTCGTCTTCGGACCCTTCATCGGTCTCGTAGATCGCCGGGTTGGC
rJMFF037E04- GAGCTCGTTAACGACGTCGTCTTCGGACCCTTCATCGGTCTCGTAGATCGCCGGGTTGGC
JMFN042I16+ GAGCTCGTTAACGACGTCGTCTTCGGACCCTTCATCGGTCTCGTAGATCGCCGGGTTGGC
____________________________________________________________
consensus GAGCTCGTTAACGACGTCGTCTTCGGACCCTTCATCGGTCTCGTAGATCGCCGGGTTGGC
. : . : . : . : . : . :
JMFN014J16+ GCCTAAGCCTTGGAGAAGCCGCTTCACGACGTGGATCATGCAGCAGCCGCGGCGGCCGAA
JMFN009L23+ GCCTAAGCCTTGGAGAAGCCGCTTCACGACGTGGATCATGCAGCAGCCGCGGCGGCCGAA
JMFN032N11+ GCCTAAGCCTTGGAGAAGCCGCTTCACGACGTGGATCATGCAGCAGCCGCGGCGGCCGAA
JMFN007M11+ GCCTAAGCCTTGGAGAAGCCGCTTCACGACGTGGATCATGCAGCAGCCGCGGCGGCCGAA
JMFF037E04+ GCCTAAGCCTTGGAGAAGCCGCTTCACGACGTGGATCATGCAGCAGCCGCGGCGGCCGAA
rJMFF037E04- GCCTAAGCCTTGGAGAAGCCGCTTCACGACGTGGATCATGCAGCAGCCGCGGCGGCCGAA
JMFN042I16+ GCCTAAGCCTTGGAGAAGCCGCTTCACGACGTGGATCATGCAGCAGCCGCGGCGGCCGAA
____________________________________________________________
consensus GCCTAAGCCTTGGAGAAGCCGCTTCACGACGTGGATCATGCAGCAGCCGCGGCGGCCGAA
. : . : . : . : . : . :
JMFN014J16+ CACGATCACGGCGTTCTCCGCCACCATATTCCTCAGATCCTCCACCGATCCGTCGGAGTA
JMFN009L23+ CACGATCACGGCGTTCTCCGCCACCATATTCCTCAGATCCTCCACCGATCCGTCGGAGTA
JMFN032N11+ CACGATCACGGCGTTCTCCGCCACCATATTCCTCAGATCCTCCACCGATCCGTCGGAGTA
JMFN007M11+ CACGATCACGGCGTTCTCCGCCACCATATTCCTCAGATCCTCCACCGATCCGTCGGAGTA
JMFF037E04+ CACGATCACGGCGTTCTCCGCCACCATATTCCTCAGATCCTCCACCGATCCGTCGGAGTA
rJMFF037E04- CACGATCACGGCGTTCTCCGCCACCATATTCCTCAGATCCTCCACCGATCCGTCGGAGTA
JMFN042I16+ CACGATCACGGCGTTCTCCGCCACCATATTCCTCAGATCCTCCACCGATCCGTCGGAGTA
____________________________________________________________
consensus CACGATCACGGCGTTCTCCGCCACCATATTCCTCAGATCCTCCACCGATCCGTCGGAGTA
. : . : . : . : . : . :
JMFN014J16+ GACGGAAGAAGCCGCGGTTTTGCTCATCGTTAACGGCGGAGAGCGGGCGGGTTTTAGCAG
JMFN009L23+ GACGGAAGAAGCCGCGGTTTTGCTCATCGTTAACGGCGGAGAGCGGGCGGGTTTTAGCAG
JMFN032N11+ GACGGAAGAAGCCGCGGTTTTGCTCATCGTTAACGGCGGAGAGCGGGCGGGTTTTAGCAG
JMFN007M11+ GACGGAAGAAGCCGCGGTTTTGCTCATCGTTAACGGCGGAGAGCGGGCGGGTTTTAGCAG
JMFF037E04+ GACGGAAGAAGCCGCGGTTTTGCTCATCGTTAACGGCGGAGAGCGGGCGGGTTTTAGCAG
rJMFF037E04- GACGGAAGAAGCCGCGGTTTTGCTCATCGTTAACGGCGGAGAGCGGGCGGGTTTTAGCAG
JMFN042I16+ GACGGAAGAAGCCGCGGTTTTGCTCATCGTTAACGGCGGAGAGCGGGCGGGTTTTAGCAG
____________________________________________________________
consensus GACGGAAGAAGCCGCGGTTTTGCTCATCGTTAACGGCGGAGAGCGGGCGGGTTTTAGCAG
. : . : . : . : . : . :
JMFN014J16+ AGGATTGGATCTCGGGACTGACGTCAGCTGCCATGTCTT
JMFN009L23+ AGGATTGGATCTCGGGACTGACGTCAGCTGCCATGTCTTGTAAGGAATCGCTTCCTGCAT
JMFN032N11+ AGGATTGGATCTCGGGACTGACGTCAGCTGCCATGTCTTGTAAGGAATCGCTTCCTGCAT
JMFN007M11+ AGGATTGGATCTCGGGACTGACGTCAGCTGCCATGTCTTGTAAGGAATCGCTTCCTGCAT
JMFF037E04+ AGGATTGGATCTCGGGACTGACGTCAGCTGCCATGTCTTGTAAGGAATCGCTTCCTGCAT
rJMFF037E04- AGGATTGGATCTCGGGACTGACGTCAGCTGCCATGTCTTGTAAGGAATCGCTTCCTGCAT
JMFN042I16+ AGGATTGGATCTCGGGACTGACGTCAGCTGCCATGTCTTGTAAGGAATCGCTTCCTGCAT
____________________________________________________________
consensus AGGATTGGATCTCGGGACTGACGTCAGCTGCCATGTCTTGTAAGGAATCGCTTCCTGCAT
. : . : . : . : . : . :
JMFN009L23+ GATTGTTTACG
JMFN032N11+ GATTGTTTACGG
JMFN007M11+ GATTGTTTACGGTGTTTAATGGAATCTAAACGAGAAA
JMFF037E04+ GATTGTTTACGGTGTTTAATGGAATCTAAACGAGAAATGGAGAGAAAAAGATG
rJMFF037E04- GATTGTTTACGGTGTTTAATGGAATCTAAACGAGAAATGGAGAGAAAAAGATG
JMFN042I16+ GATTGTTTACGGTGTTTAATGGAATCTAAACGAGAAATGGAGAGAAAAAGATGGGGGAAT
____________________________________________________________
consensus GATTGTTTACGGTGTTTAATGGAATCTAAACGAGAAATGGAGAGAAAAAGATGGGGGAAT