Contig 010392:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF010B22Sequence519003668 (13)653010392 (9)emb|CBI30949.3|1e-67unnamed protein product [Vitis vinifera]
JMFF014N04Sequence555003668 (13)791010392 (9)emb|CBI30949.3|4e-76unnamed protein product [Vitis vinifera]
JMFF033M15Sequence630010392 (9)emb|CBI30949.3|1e-70unnamed protein product [Vitis vinifera]
JMFF038G05Sequence443003668 (13)719010392 (9)emb|CBI30949.3|1e-73unnamed protein product [Vitis vinifera]
JMFN041F18Sequence610010392 (9)gb|KHG28199.1|3e-22Auxin response factor 6 [Gossypium arboreum]
JMSF023A18Sequence586003668 (13)798010392 (9)gb|KDP38016.1|1e-85hypothetical protein JCGZ_04659 [Jatropha curcas]
JMSF027O16Sequence627003668 (13)640010392 (9)emb|CBI30949.3|1e-71unnamed protein product [Vitis vinifera]
JMSF036E24Sequence631003668 (13)613010392 (9)emb|CBI30949.3|1e-60unnamed protein product [Vitis vinifera]
JMSF039C07Sequence683003668 (13)889010392 (9)gb|KDP38016.1|2e-96hypothetical protein JCGZ_04659 [Jatropha curcas]

Alignment

This contig is upended


. : . : . : . : . : . :
rJMFF038G05+ GTCGAGGAATCAAGTGTCATGCAAAATTCCGAGAATTG
                      ____________________________________________________________
consensus GTCGAGGAATCAAGTGTCATGCAAAATTCCGAGAATTG
 
. : . : . : . : . : . :
rJMSF027O16+ CCACCCAACAAAACCNTTGTTAAGGTTTACAAGTCGGGGTCCTTGGGA
rJMFF033M15+ CAACAAAACNTTTGTTAAGGTTTACAAGTCGGGGTCCTTGGGA
rJMFF038G05+ GGGCCAGAAAACCCACCCAACAAAACCTTTGTTAAGGTTTACAAGTCGGGGTCCTTGGGA
rJMSF023A18+ AAACCCACCCAACAAAACCTTTGTTAAGGTTTACAAGTCGGGGTCCTTGGGA
rJMSF039C07+ AAACCCACCCAACAAAACCTTTGTTAAGGTTTACAAGTCGGGGTCCTTGGGA
rJMFF010B22+ AAGGTTTACAAGTCGGGGTCCTTGGGA
rJMFF014N04+ AAACCCACCCAACAAAACCTTTGTTAAGGTTTACAAGTCGGGGTCCTTGGGA
                      ____________________________________________________________
consensus GGGCCAGAAAACCCACCCAACAAAACCTTTGTTAAGGTTTACAAGTCGGGGTCCTTGGGA
 
. : . : . : . : . : . :
rJMSF027O16+ AGGTCACTGGACATAACCAAGTTTAGCAGTTACCATGAGCTGCGCAGTGAACTTGCTCAG
rJMFF033M15+ AGGTCACTGGACATAACCAAGTTTAGCAGTTACCATGAGCTGCGCAGTGAACTTGCTCAG
rJMSF036E24+ GGTCACTGGACATAACCAAGTTTAGCAGTTACCATGAGCTGCGCAGTGAACTTGCTCAG
rJMFF038G05+ AGGTCACTGGACATAACCAAGTTTAGCAGTTACCATGAGCTGCGCAGTGAACTTGCTCAG
rJMSF023A18+ AGGTCACTGGACATAACCAAGTTTAGCAGTTACCATGAGCTGCGCAGTGAACTTGCTCAG
rJMSF039C07+ AGGTCACTGGACATAACCAAGTTTAGCAGTTACCATGAGCTGCGCAGTGAACTTGCTCAG
rJMFF010B22+ AGGTCACTGGACATAACCAAGTTTAGCAGTTACCATGAGCTGCGCAGTGAACTTGCTCAG
rJMFF014N04+ AGGTCACTGGACATAACCAAGTTTAGCAGTTACCATGAGCTGCGCAGTGAACTTGCTCAG
                      ____________________________________________________________
consensus AGGTCACTGGACATAACCAAGTTTAGCAGTTACCATGAGCTGCGCAGTGAACTTGCTCAG
 
. : . : . : . : . : . :
rJMSF027O16+ ATGTTCGGCCTCGAAGGCTTACTGGAGGACCCGTTGAGATCAGGCTGGCAGCTTGTATTC
rJMFF033M15+ ATGTTCGGCCTCGAAGGCTTACTGGAGGACCCGTTGAGATCAGGCTGGCAGCTTGTATTC
rJMSF036E24+ ATGTTCGGCCTCGAAGGCTTACTGGAGGACCCGTTGAGATCAGGCTGGCAGCTTGTATTC
rJMFF038G05+ ATGTTCGGCCTCGAAGGCTTACTGGAGGACCCGTTGAGATCAGGCTGGCAGCTTGTATTC
rJMSF023A18+ ATGTTCGGCCTCGAAGGCTTACTGGAGGACCCGTTGAGATCAGGCTGGCAGCTTGTATTC
rJMSF039C07+ ATGTTCGGCCTCGAAGGCTTACTGGAGGACCCGTTGAGATCAGGCTGGCAGCTTGTATTC
rJMFF010B22+ ATGTTCGGCCTCGAAGGCTTACTGGAGGACCCGTTGAGATCAGGCTGGCAGCTTGTATTC
rJMFF014N04+ ATGTTCGGCCTCGAAGGCTTACTGGAGGACCCGTTGAGATCAGGCTGGCAGCTTGTATTC
                      ____________________________________________________________
consensus ATGTTCGGCCTCGAAGGCTTACTGGAGGACCCGTTGAGATCAGGCTGGCAGCTTGTATTC
 
. : . : . : . : . : . :
rJMSF027O16+ GTTGACCGAGAGAATGATGTTCTTCTTCTTGGCGATGACCCCTGGCCGGAGTTTGTGAAT
rJMFF033M15+ GTTGACCGAGAGAATGATGTTCTTCTTCTTGGCGATGACCCCTGGCCGGAGTTTGTGAAT
rJMSF036E24+ GTTGACCGAGAGAATGATGTTCTTCTTCTTGGCGATGACCCCTGGCCGGAGTTTGTGAAT
rJMFF038G05+ GTTGACCGAGAGAATGATGTTCTTCTTCTTGGCGATGACCCCTGGCCGGAGTTTGTGAAT
rJMSF023A18+ GTTGACCGAGAGAATGATGTTCTTCTTCTTGGCGATGACCCCTGGCCGGAGTTTGTGAAT
rJMSF039C07+ GTTGACCGAGAGAATGATGTTCTTCTTCTTGGCGATGACCCCTGGCCGGAGTTTGTGAAT
rJMFF010B22+ GTTGACCGAGAGAATGATGTTCTTCTTCTTGGCGATGACCCCTGGCCGGAGTTTGTGAAT
rJMFF014N04+ GTTGACCGAGAGAATGATGTTCTTCTTCTTGGCGATGACCCCTGGCCGGAGTTTGTGAAT
JMFN041F18- GTTTGTGAAT
                      ____________________________________________________________
consensus GTTGACCGAGAGAATGATGTTCTTCTTCTTGGCGATGACCCCTGGCCGGAGTTTGTGAAT
 
. : . : . : . : . : . :
rJMSF027O16+ AGCGTATGGTGTATTAAGATACTCTCGCCTCAAGAGGTGCAGCAGATGGGAAAGCGCGGT
rJMFF033M15+ AGCGTATGGTGTATTAAGATACTCTCGCCTCAAGAGGTGCAGCAGATGGGAAAGCGCGGT
rJMSF036E24+ AGCGTATGGTGTATTAAGATACTCTCGCCTCAAGAGGTGCAGCAGATGGGAAAGCGCGGT
rJMFF038G05+ AGCGTATGGTGTATTAAGATACTCTCGCCTCAAGAGGTGCAGCAGATGGGAAAGCGCGGT
rJMSF023A18+ AGCGTATGGTGTATTAAGATACTCTCGCCTCAAGAGGTGCAGCAGATGGGAAAGCGCGGT
rJMSF039C07+ AGCGTATGGTGTATTAAGATACTCTCGCCTCAAGAGGTGCAGCAGATGGGAAAGCGCGGT
rJMFF010B22+ AGCGTATGGTGTATTAAGATACTCTCGCCTCAAGAGGTGCAGCAGATGGGAAAGCGCGGT
rJMFF014N04+ AGCGTATGGTGTATTAAGATACTCTCGCCTCAAGAGGTGCAGCAGATGGGAAAGCGCGGT
JMFN041F18- AGCGTATGGTGTATTAAGATACTCTCGCCTCAAGAGGTGCAGCAGATGGGAAAGCGCGGT
                      ____________________________________________________________
consensus AGCGTATGGTGTATTAAGATACTCTCGCCTCAAGAGGTGCAGCAGATGGGAAAGCGCGGT
 
. : . : . : . : . : . :
rJMSF027O16+ CTAGAGCTTCTAAGCTCGATTCCCATGTCTCAGATGTCTAACGGGAGTTGCAACGACTTT
rJMFF033M15+ CTAGAGCTTCTAAGCTCGATTCCCATGTCTCAGATGTCTAACGGGAGTTGCAACGACTTT
rJMSF036E24+ CTAGAGCTTCTAAGCTCGATTCCCATGTCTCAGATGTCTAACGGGAGTTGCAACGACTTT
rJMFF038G05+ CTAGAGCTTCTAAGCTCGATTCCCATGTCTCAGATGTCTAACGGGAGTTGCAACGACTTT
rJMSF023A18+ CTAGAGCTTCTAAGCTCGATTCCCATGTCTCAGATGTCTAACGGGAGTTGCAACGACTTT
rJMSF039C07+ CTAGAGCTTCTAAGCTCGATTCCCATGTCTCAGATGTCTAACGGGAGTTGCAACGACTTT
rJMFF010B22+ CTAGAGCTTCTAAGCTCGATTCCCATGTCTCAGATGTCTAACGGGAGTTGCAACGACTTT
rJMFF014N04+ CTAGAGCTTCTAAGCTCGATTCCCATGTCTCAGATGTCTAACGGGAGTTGCAACGACTTT
JMFN041F18- CTAGAGCTTCTAAGCTCGATTCCCATGTCTCAGATGTCTAACGGGAGTTGCAACGACTTT
                      ____________________________________________________________
consensus CTAGAGCTTCTAAGCTCGATTCCCATGTCTCAGATGTCTAACGGGAGTTGCAACGACTTT
 
. : . : . : . : . : . :
rJMSF027O16+ GGAAGCCCACCGGAGTCGAGGAAGATGATTAGTGGCATGGCATCTGTTGGATCTCTTGAT
rJMFF033M15+ GGAAGCCCACCGGAGTCGAGGAAGATGATTAGTGGCATGGCATCTGTTGGATCTCTTGAT
rJMSF036E24+ GGAAGCCCACCGGAGTCGAGGAAGATGATTAGTGGCATGGCATCTGTTGGATCTCTTGAT
rJMFF038G05+ GGAAGCCCACCGGAGTCGAGGAAGATGATTAGTGGCATGGCATCTGTTGGATCTCTTGAT
rJMSF023A18+ GGAAGCCCACCGGAGTCGAGGAAGATGATTAGTGGCATGGCATCTGTTGGATCTCTTGAT
rJMSF039C07+ GGAAGCCCACCGGAGTCGAGGAAGATGATTAGTGGCATGGCATCTGTTGGATCTCTTGAT
rJMFF010B22+ GGAAGCCCACCGGAGTCGAGGAAGATGATTAGTGGCATGGCATCTGTTGGATCTCTTGAT
rJMFF014N04+ GGAAGCCCACCGGAGTCGAGGAAGATGATTAGTGGCATGGCATCTGTTGGATCTCTTGAT
JMFN041F18- GGAAGCCCACCGGAGTCGAGGAAGATGATTAGTGGCATGGCATCTGTTGGATCTCTTGAT
                      ____________________________________________________________
consensus GGAAGCCCACCGGAGTCGAGGAAGATGATTAGTGGCATGGCATCTGTTGGATCTCTTGAT
 
. : . : . : . : . : . :
rJMSF027O16+ TATTAAAACTTGTGTTATTTGTTAGCCTTAGCATTTCTTTGCCCATATTATCTTGCCTAA
rJMFF033M15+ TATTAAAACTTGTGTTATTTGTTAGTCTTAGCATTTCTTTGCCCATATTATCTTGCCTAA
rJMSF036E24+ TATTAAAACTTGTGTTATTTGTTAGCCTTAGCATTTCTTTGCCCATATTATCTTGCCTAA
rJMFF038G05+ TATTAAAACTTGTGTTATTTGTTAGCCTTAGCATTTCTTTGCCCATATTATCTTGCCTAA
rJMSF023A18+ TATTAAAACTTGTGTTATTTGTTAGCCTTAGCATTTCTTTGCCCATATTATCTTGCCTAA
rJMSF039C07+ TATTAAAACTTGTGTTATTTGTTAGCCTTAGCATTTCTTTGCCCATATTATCTTGCCTAA
rJMFF010B22+ TATTAAAACTTGTGTTATTTGTTAGCCTTAGCATTTCTTTGCCCATATTATCTTGCCTAA
rJMFF014N04+ TATTAAAACTTGTGTTATTTGTTAGCCTTAGCATTTCTTTGCCCATATTATCTTGCCTAA
JMFN041F18- TATTAAAACTTGTGTTATTTGTTAGCCTTAGCATTTCTTTGCCCATATTATCTTGCCTAA
                      ____________________________________________________________
consensus TATTAAAACTTGTGTTATTTGTTAGCCTTAGCATTTCTTTGCCCATATTATCTTGCCTAA
 
. : . : . : . : . : . :
rJMSF027O16+ TTTCAAGAAATGCATGCATGCCCCCTGCAACTACTGTGCACCAACTTTTCATCTCATCTG
rJMFF033M15+ TTTCAAGAAATGCATGCATGCCCCCTGCAACTACTGTGCACCAACTTTTCATCTCATCTG
rJMSF036E24+ TTTCAAGAAATGCATGCATGCCCCCTGCAACTACTGTGCACCAACTTTTCATCTCATCTG
rJMFF038G05+ TTTCAAGAAATGCATGCATGCCCCCTGCAACTACTGTGCACCAACTTTTCATCTCATCTG
rJMSF023A18+ TTTCAAGAAATGCATGCATGCCCCCTGCAACTACTGTGCACCAACTTTTCATCTCATCTG
rJMSF039C07+ TTTCAAGAAATGCATGCATGCCCCCTGCAACTACTGTGCACCAACTTTTCATCTCATCTG
rJMFF010B22+ TTTCAAGAAATGCATGCATGCCCCCTGCAACTACTGTGCACCAACTTTTCATCTCATCTG
rJMFF014N04+ TTTCAAGAAATGCATGCATGCCCCCTGCAACTACTGTGCACCAACTTTTCATCTCATCTG
JMFN041F18- TTTCAAGAAATGCATGCATGCCCCCTGCAACTACTGTGCACCAACTTTTCATCTCATCTG
                      ____________________________________________________________
consensus TTTCAAGAAATGCATGCATGCCCCCTGCAACTACTGTGCACCAACTTTTCATCTCATCTG
 
. : . : . : . : . : . :
rJMSF027O16+ TAGTTATCATCAAGACATCTTATGATTTTGTGCCCAATTAAGGAATAGACAAACAAATGT
rJMFF033M15+ TAGTTATCATCAAGACATCTTATGATTTTGTGCCCAATTAAGGAATAGACAAACAAATGT
rJMSF036E24+ TAGTTATCATCAAGACATCTTATGATTTTGTGCCCAATTAAGGAATAGACAAACAAATGT
rJMFF038G05+ TAGTTATCATCAAGACATCTTATGATTTTGTGCCCAATTAAGGAATAGACAAACAAATGT
rJMSF023A18+ TAGTTATCATCAAGACATCTTATGATTTTGTGCCCAATTAAGGAATAGACAAACAAATGT
rJMSF039C07+ TAGTTATCATCAAGACATCTTATGATTTTGTGCCCAATTAAGGAATAGACAAACAAATGT
rJMFF010B22+ TAGTTATCATCAAGACATCTTATGATTTTGTGCCCAATTAAGGAATAGACAAACAAATGT
rJMFF014N04+ TAGTTATCATCAAGACATCTTATGATTTTGTGCCCAATTAAGGAATAGACAAACAAATGT
JMFN041F18- TAGTTATCATCAAGACATCTTATGATTTTGTGCCCAATTAAGGAATAGACAAACAAATGT
                      ____________________________________________________________
consensus TAGTTATCATCAAGACATCTTATGATTTTGTGCCCAATTAAGGAATAGACAAACAAATGT
 
. : . : . : . : . : . :
rJMSF027O16+ CTACTAGGTAATTAGAGTAGTCAAGTATTATTGTNTTCACTACTAGCAAATC
rJMFF033M15+ CTACTAGGTAATTAGAGTAGTCAAGTATTATTGTTTTCACTACTAGC
rJMSF036E24+ CTACTAGGTAATTAGAGTAGTCAAGTATTATTGTTTTCACTACTAGCAAATCTAGTACTT
rJMFF038G05+ CTACTAGGTAATTAGAGTAGTCAAGTATTATTGTTTTCACTACTAGCAAATCTAGTACTT
rJMSF023A18+ CTACTAGGTAATTAGAGTAGTCAAGTATTATTGTTTTCACTACTAGCAAATCTAGTACTT
rJMSF039C07+ CTACTAGGTAATTAGAGTAGTCAAGTATTATTGTTTTCACTACTAGCAAATCTAGTACTT
rJMFF010B22+ CTACTAGGTAATTAGAGTAGTCAAGTATTATTGTTTTCACTACTAGCAAATCTAGTACTT
rJMFF014N04+ CTACTAGGTAATTAGAGTAGTCAAGTATTATTGTTTTCACTACTAGCAAATCTAGTACTT
JMFN041F18- CTACTAGGTAATTAGAGTAGTCAAGTATTATTGTTTTCACTACTAGCAAATCTAGTACTT
                      ____________________________________________________________
consensus CTACTAGGTAATTAGAGTAGTCAAGTATTATTGTTTTCACTACTAGCAAATCTAGTACTT
 
. : . : . : . : . : . :
rJMSF036E24+ T
rJMFF038G05+ TTGATGTGGAAATGTAATAT
rJMSF023A18+ TTGATGTGGAAATGTAATAT
rJMSF039C07+ TTGATGTGGAAATGTAATATTGTACACACTGGTTGCCTTAGTGCA
rJMFF010B22+ TTGATGTGGAAATGTAATATTGTACA
rJMFF014N04+ TTGATGTGGAAATGTAATATTGTACACACTGGTTGCCTTAGTGCACATTCACTATACTAG
JMFN041F18- TTGATGTGGAAATGTAATATTGTACACACTGGTTGCCTTAGTGCACATTCACTATACTAG
                      ____________________________________________________________
consensus TTGATGTGGAAATGTAATATTGTACACACTGGTTGCCTTAGTGCACATTCACTATACTAG
 
. : . : . : . : . : . :
rJMFF014N04+ AT
JMFN041F18- ATTCTCTACCTGTTATCACTTTCATGCCAAATGACTAATCCAGTACTACTCTTTTTAGGG
                      ____________________________________________________________
consensus ATTCTCTACCTGTTATCACTTTCATGCCAAATGACTAATCCAGTACTACTCTTTTTAGGG
 
. : . : . : . : . : . :
JMFN041F18- CATTGTTGCATACTGAGAGTCTCGAATTGTACGTGACTTTTAAGTACTTTTTACTTGAAC
                      ____________________________________________________________
consensus CATTGTTGCATACTGAGAGTCTCGAATTGTACGTGACTTTTAAGTACTTTTTACTTGAAC