Contig 010392:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF010B22Sequence519003668 (13)653010392 (9)emb|CBI30949.3|1e-67unnamed protein product [Vitis vinifera]
JMFF014N04Sequence555003668 (13)791010392 (9)emb|CBI30949.3|4e-76unnamed protein product [Vitis vinifera]
JMFF033M15Sequence630010392 (9)emb|CBI30949.3|1e-70unnamed protein product [Vitis vinifera]
JMFF038G05Sequence443003668 (13)719010392 (9)emb|CBI30949.3|1e-73unnamed protein product [Vitis vinifera]
JMFN041F18Sequence610010392 (9)gb|KHG28199.1|3e-22Auxin response factor 6 [Gossypium arboreum]
JMSF023A18Sequence586003668 (13)798010392 (9)gb|KDP38016.1|1e-85hypothetical protein JCGZ_04659 [Jatropha curcas]
JMSF027O16Sequence627003668 (13)640010392 (9)emb|CBI30949.3|1e-71unnamed protein product [Vitis vinifera]
JMSF036E24Sequence631003668 (13)613010392 (9)emb|CBI30949.3|1e-60unnamed protein product [Vitis vinifera]
JMSF039C07Sequence683003668 (13)889010392 (9)gb|KDP38016.1|2e-96hypothetical protein JCGZ_04659 [Jatropha curcas]

Alignment

This contig is upended


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rJMFF038G05+                                GTCGAGGAATCAAGTGTCATGCAAAATTCCGAGAATTG
                      ____________________________________________________________
consensus                                   GTCGAGGAATCAAGTGTCATGCAAAATTCCGAGAATTG
 
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rJMSF027O16+                      CCACCCAACAAAACCNTTGTTAAGGTTTACAAGTCGGGGTCCTTGGGA
rJMFF033M15+                           CAACAAAACNTTTGTTAAGGTTTACAAGTCGGGGTCCTTGGGA
rJMFF038G05+          GGGCCAGAAAACCCACCCAACAAAACCTTTGTTAAGGTTTACAAGTCGGGGTCCTTGGGA
rJMSF023A18+                  AAACCCACCCAACAAAACCTTTGTTAAGGTTTACAAGTCGGGGTCCTTGGGA
rJMSF039C07+                  AAACCCACCCAACAAAACCTTTGTTAAGGTTTACAAGTCGGGGTCCTTGGGA
rJMFF010B22+                                           AAGGTTTACAAGTCGGGGTCCTTGGGA
rJMFF014N04+                  AAACCCACCCAACAAAACCTTTGTTAAGGTTTACAAGTCGGGGTCCTTGGGA
                      ____________________________________________________________
consensus             GGGCCAGAAAACCCACCCAACAAAACCTTTGTTAAGGTTTACAAGTCGGGGTCCTTGGGA
 
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rJMSF027O16+          AGGTCACTGGACATAACCAAGTTTAGCAGTTACCATGAGCTGCGCAGTGAACTTGCTCAG
rJMFF033M15+          AGGTCACTGGACATAACCAAGTTTAGCAGTTACCATGAGCTGCGCAGTGAACTTGCTCAG
rJMSF036E24+           GGTCACTGGACATAACCAAGTTTAGCAGTTACCATGAGCTGCGCAGTGAACTTGCTCAG
rJMFF038G05+          AGGTCACTGGACATAACCAAGTTTAGCAGTTACCATGAGCTGCGCAGTGAACTTGCTCAG
rJMSF023A18+          AGGTCACTGGACATAACCAAGTTTAGCAGTTACCATGAGCTGCGCAGTGAACTTGCTCAG
rJMSF039C07+          AGGTCACTGGACATAACCAAGTTTAGCAGTTACCATGAGCTGCGCAGTGAACTTGCTCAG
rJMFF010B22+          AGGTCACTGGACATAACCAAGTTTAGCAGTTACCATGAGCTGCGCAGTGAACTTGCTCAG
rJMFF014N04+          AGGTCACTGGACATAACCAAGTTTAGCAGTTACCATGAGCTGCGCAGTGAACTTGCTCAG
                      ____________________________________________________________
consensus             AGGTCACTGGACATAACCAAGTTTAGCAGTTACCATGAGCTGCGCAGTGAACTTGCTCAG
 
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rJMSF027O16+          ATGTTCGGCCTCGAAGGCTTACTGGAGGACCCGTTGAGATCAGGCTGGCAGCTTGTATTC
rJMFF033M15+          ATGTTCGGCCTCGAAGGCTTACTGGAGGACCCGTTGAGATCAGGCTGGCAGCTTGTATTC
rJMSF036E24+          ATGTTCGGCCTCGAAGGCTTACTGGAGGACCCGTTGAGATCAGGCTGGCAGCTTGTATTC
rJMFF038G05+          ATGTTCGGCCTCGAAGGCTTACTGGAGGACCCGTTGAGATCAGGCTGGCAGCTTGTATTC
rJMSF023A18+          ATGTTCGGCCTCGAAGGCTTACTGGAGGACCCGTTGAGATCAGGCTGGCAGCTTGTATTC
rJMSF039C07+          ATGTTCGGCCTCGAAGGCTTACTGGAGGACCCGTTGAGATCAGGCTGGCAGCTTGTATTC
rJMFF010B22+          ATGTTCGGCCTCGAAGGCTTACTGGAGGACCCGTTGAGATCAGGCTGGCAGCTTGTATTC
rJMFF014N04+          ATGTTCGGCCTCGAAGGCTTACTGGAGGACCCGTTGAGATCAGGCTGGCAGCTTGTATTC
                      ____________________________________________________________
consensus             ATGTTCGGCCTCGAAGGCTTACTGGAGGACCCGTTGAGATCAGGCTGGCAGCTTGTATTC
 
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rJMSF027O16+          GTTGACCGAGAGAATGATGTTCTTCTTCTTGGCGATGACCCCTGGCCGGAGTTTGTGAAT
rJMFF033M15+          GTTGACCGAGAGAATGATGTTCTTCTTCTTGGCGATGACCCCTGGCCGGAGTTTGTGAAT
rJMSF036E24+          GTTGACCGAGAGAATGATGTTCTTCTTCTTGGCGATGACCCCTGGCCGGAGTTTGTGAAT
rJMFF038G05+          GTTGACCGAGAGAATGATGTTCTTCTTCTTGGCGATGACCCCTGGCCGGAGTTTGTGAAT
rJMSF023A18+          GTTGACCGAGAGAATGATGTTCTTCTTCTTGGCGATGACCCCTGGCCGGAGTTTGTGAAT
rJMSF039C07+          GTTGACCGAGAGAATGATGTTCTTCTTCTTGGCGATGACCCCTGGCCGGAGTTTGTGAAT
rJMFF010B22+          GTTGACCGAGAGAATGATGTTCTTCTTCTTGGCGATGACCCCTGGCCGGAGTTTGTGAAT
rJMFF014N04+          GTTGACCGAGAGAATGATGTTCTTCTTCTTGGCGATGACCCCTGGCCGGAGTTTGTGAAT
JMFN041F18-                                                             GTTTGTGAAT
                      ____________________________________________________________
consensus             GTTGACCGAGAGAATGATGTTCTTCTTCTTGGCGATGACCCCTGGCCGGAGTTTGTGAAT
 
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rJMSF027O16+          AGCGTATGGTGTATTAAGATACTCTCGCCTCAAGAGGTGCAGCAGATGGGAAAGCGCGGT
rJMFF033M15+          AGCGTATGGTGTATTAAGATACTCTCGCCTCAAGAGGTGCAGCAGATGGGAAAGCGCGGT
rJMSF036E24+          AGCGTATGGTGTATTAAGATACTCTCGCCTCAAGAGGTGCAGCAGATGGGAAAGCGCGGT
rJMFF038G05+          AGCGTATGGTGTATTAAGATACTCTCGCCTCAAGAGGTGCAGCAGATGGGAAAGCGCGGT
rJMSF023A18+          AGCGTATGGTGTATTAAGATACTCTCGCCTCAAGAGGTGCAGCAGATGGGAAAGCGCGGT
rJMSF039C07+          AGCGTATGGTGTATTAAGATACTCTCGCCTCAAGAGGTGCAGCAGATGGGAAAGCGCGGT
rJMFF010B22+          AGCGTATGGTGTATTAAGATACTCTCGCCTCAAGAGGTGCAGCAGATGGGAAAGCGCGGT
rJMFF014N04+          AGCGTATGGTGTATTAAGATACTCTCGCCTCAAGAGGTGCAGCAGATGGGAAAGCGCGGT
JMFN041F18-           AGCGTATGGTGTATTAAGATACTCTCGCCTCAAGAGGTGCAGCAGATGGGAAAGCGCGGT
                      ____________________________________________________________
consensus             AGCGTATGGTGTATTAAGATACTCTCGCCTCAAGAGGTGCAGCAGATGGGAAAGCGCGGT
 
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rJMSF027O16+          CTAGAGCTTCTAAGCTCGATTCCCATGTCTCAGATGTCTAACGGGAGTTGCAACGACTTT
rJMFF033M15+          CTAGAGCTTCTAAGCTCGATTCCCATGTCTCAGATGTCTAACGGGAGTTGCAACGACTTT
rJMSF036E24+          CTAGAGCTTCTAAGCTCGATTCCCATGTCTCAGATGTCTAACGGGAGTTGCAACGACTTT
rJMFF038G05+          CTAGAGCTTCTAAGCTCGATTCCCATGTCTCAGATGTCTAACGGGAGTTGCAACGACTTT
rJMSF023A18+          CTAGAGCTTCTAAGCTCGATTCCCATGTCTCAGATGTCTAACGGGAGTTGCAACGACTTT
rJMSF039C07+          CTAGAGCTTCTAAGCTCGATTCCCATGTCTCAGATGTCTAACGGGAGTTGCAACGACTTT
rJMFF010B22+          CTAGAGCTTCTAAGCTCGATTCCCATGTCTCAGATGTCTAACGGGAGTTGCAACGACTTT
rJMFF014N04+          CTAGAGCTTCTAAGCTCGATTCCCATGTCTCAGATGTCTAACGGGAGTTGCAACGACTTT
JMFN041F18-           CTAGAGCTTCTAAGCTCGATTCCCATGTCTCAGATGTCTAACGGGAGTTGCAACGACTTT
                      ____________________________________________________________
consensus             CTAGAGCTTCTAAGCTCGATTCCCATGTCTCAGATGTCTAACGGGAGTTGCAACGACTTT
 
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rJMSF027O16+          GGAAGCCCACCGGAGTCGAGGAAGATGATTAGTGGCATGGCATCTGTTGGATCTCTTGAT
rJMFF033M15+          GGAAGCCCACCGGAGTCGAGGAAGATGATTAGTGGCATGGCATCTGTTGGATCTCTTGAT
rJMSF036E24+          GGAAGCCCACCGGAGTCGAGGAAGATGATTAGTGGCATGGCATCTGTTGGATCTCTTGAT
rJMFF038G05+          GGAAGCCCACCGGAGTCGAGGAAGATGATTAGTGGCATGGCATCTGTTGGATCTCTTGAT
rJMSF023A18+          GGAAGCCCACCGGAGTCGAGGAAGATGATTAGTGGCATGGCATCTGTTGGATCTCTTGAT
rJMSF039C07+          GGAAGCCCACCGGAGTCGAGGAAGATGATTAGTGGCATGGCATCTGTTGGATCTCTTGAT
rJMFF010B22+          GGAAGCCCACCGGAGTCGAGGAAGATGATTAGTGGCATGGCATCTGTTGGATCTCTTGAT
rJMFF014N04+          GGAAGCCCACCGGAGTCGAGGAAGATGATTAGTGGCATGGCATCTGTTGGATCTCTTGAT
JMFN041F18-           GGAAGCCCACCGGAGTCGAGGAAGATGATTAGTGGCATGGCATCTGTTGGATCTCTTGAT
                      ____________________________________________________________
consensus             GGAAGCCCACCGGAGTCGAGGAAGATGATTAGTGGCATGGCATCTGTTGGATCTCTTGAT
 
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rJMSF027O16+          TATTAAAACTTGTGTTATTTGTTAGCCTTAGCATTTCTTTGCCCATATTATCTTGCCTAA
rJMFF033M15+          TATTAAAACTTGTGTTATTTGTTAGTCTTAGCATTTCTTTGCCCATATTATCTTGCCTAA
rJMSF036E24+          TATTAAAACTTGTGTTATTTGTTAGCCTTAGCATTTCTTTGCCCATATTATCTTGCCTAA
rJMFF038G05+          TATTAAAACTTGTGTTATTTGTTAGCCTTAGCATTTCTTTGCCCATATTATCTTGCCTAA
rJMSF023A18+          TATTAAAACTTGTGTTATTTGTTAGCCTTAGCATTTCTTTGCCCATATTATCTTGCCTAA
rJMSF039C07+          TATTAAAACTTGTGTTATTTGTTAGCCTTAGCATTTCTTTGCCCATATTATCTTGCCTAA
rJMFF010B22+          TATTAAAACTTGTGTTATTTGTTAGCCTTAGCATTTCTTTGCCCATATTATCTTGCCTAA
rJMFF014N04+          TATTAAAACTTGTGTTATTTGTTAGCCTTAGCATTTCTTTGCCCATATTATCTTGCCTAA
JMFN041F18-           TATTAAAACTTGTGTTATTTGTTAGCCTTAGCATTTCTTTGCCCATATTATCTTGCCTAA
                      ____________________________________________________________
consensus             TATTAAAACTTGTGTTATTTGTTAGCCTTAGCATTTCTTTGCCCATATTATCTTGCCTAA
 
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rJMSF027O16+          TTTCAAGAAATGCATGCATGCCCCCTGCAACTACTGTGCACCAACTTTTCATCTCATCTG
rJMFF033M15+          TTTCAAGAAATGCATGCATGCCCCCTGCAACTACTGTGCACCAACTTTTCATCTCATCTG
rJMSF036E24+          TTTCAAGAAATGCATGCATGCCCCCTGCAACTACTGTGCACCAACTTTTCATCTCATCTG
rJMFF038G05+          TTTCAAGAAATGCATGCATGCCCCCTGCAACTACTGTGCACCAACTTTTCATCTCATCTG
rJMSF023A18+          TTTCAAGAAATGCATGCATGCCCCCTGCAACTACTGTGCACCAACTTTTCATCTCATCTG
rJMSF039C07+          TTTCAAGAAATGCATGCATGCCCCCTGCAACTACTGTGCACCAACTTTTCATCTCATCTG
rJMFF010B22+          TTTCAAGAAATGCATGCATGCCCCCTGCAACTACTGTGCACCAACTTTTCATCTCATCTG
rJMFF014N04+          TTTCAAGAAATGCATGCATGCCCCCTGCAACTACTGTGCACCAACTTTTCATCTCATCTG
JMFN041F18-           TTTCAAGAAATGCATGCATGCCCCCTGCAACTACTGTGCACCAACTTTTCATCTCATCTG
                      ____________________________________________________________
consensus             TTTCAAGAAATGCATGCATGCCCCCTGCAACTACTGTGCACCAACTTTTCATCTCATCTG
 
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rJMSF027O16+          TAGTTATCATCAAGACATCTTATGATTTTGTGCCCAATTAAGGAATAGACAAACAAATGT
rJMFF033M15+          TAGTTATCATCAAGACATCTTATGATTTTGTGCCCAATTAAGGAATAGACAAACAAATGT
rJMSF036E24+          TAGTTATCATCAAGACATCTTATGATTTTGTGCCCAATTAAGGAATAGACAAACAAATGT
rJMFF038G05+          TAGTTATCATCAAGACATCTTATGATTTTGTGCCCAATTAAGGAATAGACAAACAAATGT
rJMSF023A18+          TAGTTATCATCAAGACATCTTATGATTTTGTGCCCAATTAAGGAATAGACAAACAAATGT
rJMSF039C07+          TAGTTATCATCAAGACATCTTATGATTTTGTGCCCAATTAAGGAATAGACAAACAAATGT
rJMFF010B22+          TAGTTATCATCAAGACATCTTATGATTTTGTGCCCAATTAAGGAATAGACAAACAAATGT
rJMFF014N04+          TAGTTATCATCAAGACATCTTATGATTTTGTGCCCAATTAAGGAATAGACAAACAAATGT
JMFN041F18-           TAGTTATCATCAAGACATCTTATGATTTTGTGCCCAATTAAGGAATAGACAAACAAATGT
                      ____________________________________________________________
consensus             TAGTTATCATCAAGACATCTTATGATTTTGTGCCCAATTAAGGAATAGACAAACAAATGT
 
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rJMSF027O16+          CTACTAGGTAATTAGAGTAGTCAAGTATTATTGTNTTCACTACTAGCAAATC        
rJMFF033M15+          CTACTAGGTAATTAGAGTAGTCAAGTATTATTGTTTTCACTACTAGC             
rJMSF036E24+          CTACTAGGTAATTAGAGTAGTCAAGTATTATTGTTTTCACTACTAGCAAATCTAGTACTT
rJMFF038G05+          CTACTAGGTAATTAGAGTAGTCAAGTATTATTGTTTTCACTACTAGCAAATCTAGTACTT
rJMSF023A18+          CTACTAGGTAATTAGAGTAGTCAAGTATTATTGTTTTCACTACTAGCAAATCTAGTACTT
rJMSF039C07+          CTACTAGGTAATTAGAGTAGTCAAGTATTATTGTTTTCACTACTAGCAAATCTAGTACTT
rJMFF010B22+          CTACTAGGTAATTAGAGTAGTCAAGTATTATTGTTTTCACTACTAGCAAATCTAGTACTT
rJMFF014N04+          CTACTAGGTAATTAGAGTAGTCAAGTATTATTGTTTTCACTACTAGCAAATCTAGTACTT
JMFN041F18-           CTACTAGGTAATTAGAGTAGTCAAGTATTATTGTTTTCACTACTAGCAAATCTAGTACTT
                      ____________________________________________________________
consensus             CTACTAGGTAATTAGAGTAGTCAAGTATTATTGTTTTCACTACTAGCAAATCTAGTACTT
 
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rJMSF036E24+          T                                                           
rJMFF038G05+          TTGATGTGGAAATGTAATAT                                        
rJMSF023A18+          TTGATGTGGAAATGTAATAT                                        
rJMSF039C07+          TTGATGTGGAAATGTAATATTGTACACACTGGTTGCCTTAGTGCA               
rJMFF010B22+          TTGATGTGGAAATGTAATATTGTACA                                  
rJMFF014N04+          TTGATGTGGAAATGTAATATTGTACACACTGGTTGCCTTAGTGCACATTCACTATACTAG
JMFN041F18-           TTGATGTGGAAATGTAATATTGTACACACTGGTTGCCTTAGTGCACATTCACTATACTAG
                      ____________________________________________________________
consensus             TTGATGTGGAAATGTAATATTGTACACACTGGTTGCCTTAGTGCACATTCACTATACTAG
 
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rJMFF014N04+          AT                                                          
JMFN041F18-           ATTCTCTACCTGTTATCACTTTCATGCCAAATGACTAATCCAGTACTACTCTTTTTAGGG
                      ____________________________________________________________
consensus             ATTCTCTACCTGTTATCACTTTCATGCCAAATGACTAATCCAGTACTACTCTTTTTAGGG
 
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JMFN041F18-           CATTGTTGCATACTGAGAGTCTCGAATTGTACGTGACTTTTAAGTACTTTTTACTTGAAC
                      ____________________________________________________________
consensus             CATTGTTGCATACTGAGAGTCTCGAATTGTACGTGACTTTTAAGTACTTTTTACTTGAAC