| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF033J06 | Sequence | 139 | 010387 (5) | emb|CBI30857.3| | 2e-19 | unnamed protein product [Vitis vinifera] | 720 | 006353 (21) | ref|XP_009335198.1| | 4e-68 | PREDICTED: malate dehydrogenase, mitochondrial [Pyrus x bretschneideri] |
| JMFN011J09 | Sequence | 625 | 010387 (5) | gb|ADE42972.1| | 1e-122 | putative 60S ribosomal protein L18a [Gardenia jasminoides] | |||||
| JMFN039J16 | Sequence | 632 | 010387 (5) | gb|ADE42972.1| | 1e-120 | putative 60S ribosomal protein L18a [Gardenia jasminoides] | |||||
| JMSF014G23 | Sequence | 243 | 010387 (5) | gb|KGN54936.1| | 7e-15 | hypothetical protein Csa_4G608120 [Cucumis sativus] | 715 | 010387 (5) | gb|ADE42972.1| | 4e-119 | putative 60S ribosomal protein L18a [Gardenia jasminoides] |
This contig is upended
. : . : . : . : . : . :
rJMSF014G23- GATCAAATAGTAACACAAGAATCTTTACCGACAATGGTCTTGA
____________________________________________________________
consensus GATCAAATAGTAACACAAGAATCTTTACCGACAATGGTCTTGA
. : . : . : . : . : . :
rJMSF014G23- CCTAAACGAATACTCCAAAATGTGAAACAAAATGATAATTTGGCAGCACAAGACAAAACA
JMFN011J09+ AGACAAAACA
JMFN039J16+ AGACAAAACA
____________________________________________________________
consensus CCTAAACGAATACTCCAAAATGTGAAACAAAATGATAATTTGGCAGCACAAGACAAAACA
. : . : . : . : . : . :
rJMSF014G23- AATTAAACAAAGAGGTTGGGTCTGGAAGCCTTGTAAGTGGTCTTGAGCTTCCTTGATGGT
JMFN011J09+ AATTAAACAAAGAGGTTGGGTCTGGAAGCCTTGTAAGTGGTCTTGAGCTTCCTTGATGGT
JMFN039J16+ AATTAAACAAAGAGGTNGGGTCTGGAAGCCTTGTAAGTGGTCTTGAGCTTCCTGNATGGT
____________________________________________________________
consensus AATTAAACAAAGAGGTTGGGTCTGGAAGCCTTGTAAGTGGTCTTGAGCTTCCTTGATGGT
. : . : . : . : . : . :
rJMSF014G23- GGCCTCACTTTCTTGAACACCAATGGGAACTTGATCTTTGAGTTATGGAACTGTTTGGTG
JMFN011J09+ GGCCTCACTTTCTTGAACACCAATGGGAACTTGATCTTTGAGTTATGGAACTGTTTGGTG
JMFN039J16+ GGCCTCACTTTCTTGAACACCAATGGGAACTTGATCTTTGAGTTATGGAACTGTTTGGTG
____________________________________________________________
consensus GGCCTCACTTTCTTGAACACCAATGGGAACTTGATCTTTGAGTTATGGAACTGTTTGGTG
. : . : . : . : . : . :
rJMSF014G23- CTCTCTCTCTTGCAGAGCTTGGCAGGGACTGTAGCCGTCTTGATGATCTGAATGCAATGA
JMFN011J09+ CTCTCTCTCTTGCAGAGCTTGGCAGGGACTGTAGCCGTCTTGATGATCTGAATGCAATGA
JMFN039J16+ CTCTCTCTCTTGCAGAGCTTGGCAGGGACTGTAGCCGTCTTGATGATCTGAATGCAATGA
____________________________________________________________
consensus CTCTCTCTCTTGCAGAGCTTGGCAGGGACTGTAGCCGTCTTGATGATCTGAATGCAATGA
. : . : . : . : . : . :
rJMSF014G23- TGGCGGACCCTGTGACGTGAAGCCATCTCAGTGTACATCTGTTCAACAGCACCATTCAAA
JMFN011J09+ TGGCGGACCCTGTGACGTGAAGCCATCTCAGTGTACATCTGTTCAACAGCACCATTCAAA
JMFN039J16+ TGGCGGACCCTGTGACGTGAAGCCATCTCAGTGTACATCTGTTCAACAGCACCATTCAAA
____________________________________________________________
consensus TGGCGGACCCTGTGACGTGAAGCCATCTCAGTGTACATCTGTTCAACAGCACCATTCAAA
. : . : . : . : . : . :
JMFF033J06+ CCTCAGC
rJMSF014G23- GTTGTATCACGGAACTCCTTGTACATGTTGTGATACCCTGTTCTGCTTTGGTACCTCAGC
JMFN011J09+ GTTGTATCACGGAACTCCTTGTACATGTTGTGATACCCTGTTCTGCTTTGGTACCTCAGC
JMFN039J16+ GTTGTATCACGGAACTCCTTGTACATGTTGTGATACCCTGTTCTGCTTTGGTACCTCAGC
____________________________________________________________
consensus GTTGTATCACGGAACTCCTTGTACATGTTGTGATACCCTGTTCTGCTTTGGTACCTCAGC
. : . : . : . : . : . :
JMFF033J06+ CATATCCCAAAATTCTTGATAGTGGTAGGGTTCTTCTCAAAGATCTCATTGATAGCTAGG
rJMSF014G23- CATATCCCAAAATTCTTGATAGTGGTAGGGTTCTTCTCAAAGATCTCATTGATAGCTAGG
JMFN011J09+ CATATCCCAAAATTCTTGATAGTGGTAGGGTTCTTCTCAAAGATCTCATTGATAGCTAGG
JMFN039J16+ CATATCCCAAAATTCTTGATAGTGGTAGGGTTCTTCTCAAAGATCTCATTGATAGCTAGG
____________________________________________________________
consensus CATATCCCAAAATTCTTGATAGTGGTAGGGTTCTTCTCAAAGATCTCATTGATAGCTAGG
. : . : . : . : . : . :
JMFF033J06+ ACCTGGCCATTGGCTTTCTTCACCTTCTTCAGCTTCCTCAAAAAATACCAGAACTTGG
rJMSF014G23- ACCTGGCCATTGGCTTTCTTCACCTTCTTCAGCTTCCTCAAAAAATACCAGAACTTGGAC
JMFN011J09+ ACCTGGCCATTGGCTTTCTTCACCTTCTTCAGCTTCCTCAAAAAATACCAGAACTTGGAC
JMFN039J16+ ACCTGGCCATTGGCTTTCTTCACCTTCTTCAGCTTCCTCAAAAAATACCAGAACTTGGAC
____________________________________________________________
consensus ACCTGGCCATTGGCTTTCTTCACCTTCTTCAGCTTCCTCAAAAAATACCAGAACTTGGAC
. : . : . : . : . : . :
rJMSF014G23- TTCGCACGGACCTCATTAGTGGCCCAAAGCTTCATGCGGTAGATCTTAGGGTGCTCATCG
JMSF014G23+ TTCGCACGGACCTCATTAGTGGCCCAAAGCTTCATGCGGTAGATCTTAGGGTGCTCATCG
JMFN011J09+ TTCGCACGGACCTCATTAGTGGCCCAAAGCTTCATGCGGTAGATCTTAGGGTGCTCATCG
JMFN039J16+ TTCGCACGGACCTCATTAGTGGCCCAAAGCTTCATGCGGTAGATCTTAGGGTGCTCATCG
____________________________________________________________
consensus TTCGCACGGACCTCATTAGTGGCCCAAAGCTTCATGCGGTAGATCTTAGGGTGCTCATCG
. : . : . : . : . : . :
rJMSF014G23- GACTCCGAGGGGAGAGCTCTTACGACCACTTGGTACTGATGGAA
JMSF014G23+ GACTCCGAGGGGAGAGCTCTTACGACCACTTGGTACTGATGGAA
JMFN011J09+ GACTCCGAGGGGAGAGCTCTTCCGACCACTTGGTACTGATGGAATCTG
JMFN039J16+ GACTCCGAGGGGAGAGCTCTTCCGACCACTTGGTACTGATGGAATCTGAAAATCGCCATT
____________________________________________________________
consensus GACTCCGAGGGGAGAGCTCTTACGACCACTTGGTACTGATGGAATCTGAAAATCGCCATT
. : . : . : . : . : . :
JMFN039J16+ TCTCGATCGCGCTAAAGCAGCGAACAGCCTCTCTGCGTCTTTTTGTCTTTCTCCGCCGCG
____________________________________________________________
consensus TCTCGATCGCGCTAAAGCAGCGAACAGCCTCTCTGCGTCTTTTTGTCTTTCTCCGCCGCG