| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF037L04 | Sequence | 566 | 003236 (6) | emb|CDP09782.1| | 1e-32 | unnamed protein product [Coffea canephora] | 798 | 010386 (6) | ref|XP_009589208.1| | 4e-25 | PREDICTED: uncharacterized protein LOC104086600 isoform X1 [Nicotiana tomentosi |
| JMFF044F01 | Sequence | 644 | 003236 (6) | emb|CDP09782.1| | 2e-32 | unnamed protein product [Coffea canephora] | 652 | 010386 (6) | ref|XP_009589209.1| | 2e-16 | PREDICTED: uncharacterized protein LOC104086600 isoform X2 [Nicotiana tomentosi |
| JMFN003O18 | Sequence | 501 | 010386 (6) | ||||||||
| JMFN039F20 | Sequence | 610 | 010386 (6) | ref|XP_009589208.1| | 3e-26 | PREDICTED: uncharacterized protein LOC104086600 isoform X1 [Nicotiana tomentosi | |||||
| JMFS077G05 | Sequence | 451 | 010386 (6) | ||||||||
| JMSF019A07 | Sequence | 374 | 003236 (6) | emb|CDP09782.1| | 2e-22 | unnamed protein product [Coffea canephora] | 781 | 010386 (6) | ref|XP_009589208.1| | 2e-25 | PREDICTED: uncharacterized protein LOC104086600 isoform X1 [Nicotiana tomentosi |
This contig is upended
. : . : . : . : . : . :
JMFS077G05+ AAGGAACTATGTTT
JMFN003O18+ AAGGAACTATGTTT
rJMFF044F01- CCTTATGGCGGATCACCCTGGAGAGTTTTTTTTTTTTTTTTAAAGGAACTATGTTT
rJMFF037L04- TGTTT
____________________________________________________________
consensus CCTTATGGCGGATCACCCTGGAGAGTTTTTTTTTTTTTTTTAAAGGAACTATGTTT
. : . : . : . : . : . :
JMFS077G05+ TCTGTGTTTTATACAAGCAGCATCCGCCTGTCAACACGACAACAAGCTAAATCTTTCACA
JMFN003O18+ TCTGTGTTTTATACAAGCAGCATCCGCCTGTCAACACGACAACAAGCTAAATCTTTCACA
rJMFF044F01- TCTGTGTTTTATACAAGCAGCATCCGCCTGTCAACACGACAACAAGCTAAATCTTTCACA
rJMFF037L04- TCTGTGTTTTATACAAGCAGCATCCGCCTGTCAACACGACAACAAGCTAAATCTTTCACA
rJMSF019A07- GTCAACACGACAACAAGCTAAATCTTTCACA
____________________________________________________________
consensus TCTGTGTTTTATACAAGCAGCATCCGCCTGTCAACACGACAACAAGCTAAATCTTTCACA
. : . : . : . : . : . :
JMFS077G05+ ACAATTTTTCGACCTAATTAATAAATCTTTAGACAACCTGAAACTGACACTATCCCAGTA
JMFN003O18+ ACAATTTTTCGACCTAATTAATAAATCTTTAGACAACCTGAAACTGACACTATCCCAGTA
rJMFF044F01- ACAATTTTTCGACCTAATTAATAAATCTTTAGACAACCTGGAACTGACACTATCCCAGTA
rJMFF037L04- ACAATTTTTCGACCTAATTAATAAATCTTTAGACAACCTGGAACTGACACTATCCCAGTA
rJMSF019A07- ACAATTTTTCGACCTAATTAATAAATCTTTAGACAACCTGAAACTGACACTATCCCAGTA
____________________________________________________________
consensus ACAATTTTTCGACCTAATTAATAAATCTTTAGACAACCTGAAACTGACACTATCCCAGTA
. : . : . : . : . : . :
JMFS077G05+ TTACACTACATTTATCCCTGTCACTACACCATGTTAAACAACAAAAGATGAACAAGTAAA
JMFN003O18+ TTACACTACATTTATCCCTGTCACTACACCATGTTAAACAACAAAAGATGAACAAGTAAA
rJMFF044F01- TTACACTACATTTATCCCTGTCACTACACCATGTTAAACAACAAAAGATGAACAAGTAAA
rJMFF037L04- TTACACTACATTTATCCCTGTCACTACACCATGTTAAACAACAAAAGATGAACAAGTAAA
rJMSF019A07- TTACACTACATTTATCCCTGTCACTACACCATGTTAAACAACAAAAGATGAACAAGTAAA
____________________________________________________________
consensus TTACACTACATTTATCCCTGTCACTACACCATGTTAAACAACAAAAGATGAACAAGTAAA
. : . : . : . : . : . :
JMFS077G05+ CTAGTTATCAATTATTGCTTACACCATTACACCATTAACATCCCCTTGTCATCGATCAGA
JMFN003O18+ CTAGTTATCAATTATTGCTTACACCATTACACCATTAACATCCCCTTGTCATCGATCAGA
rJMFF044F01- CTAGTTATCAATTATTGCTTACACCATTACACCATTAACATCCCCTTGTCATCGATCAGA
rJMFF037L04- CTAGTTATCAATTATTGCTTACACCATTACACCATTAACATCCCCTTGTCATCGATCAGA
rJMSF019A07- CTAGTTATCAATTATTGCTTACACCATTACACCATTAACATCCCCTTGTCATCGATCAGA
JMFN039F20+ CATCGATCAGA
____________________________________________________________
consensus CTAGTTATCAATTATTGCTTACACCATTACACCATTAACATCCCCTTGTCATCGATCAGA
. : . : . : . : . : . :
JMFS077G05+ AGGTGAGTACGTCAAGATTTAGCCTTTGCAGGAAAGTCCTTCCGGGGCTCCAAATGAGGC
JMFN003O18+ AGGTGAGTACGTCAAGATTTAGCCTTTGCAGGAAAGTCCTTCCGGGGCTCCAAATGAGGC
rJMFF044F01- AGGTGAGTACGTCAAGATTTAGCCTTTGCAGGAAAGTCCTTCCGGGGCTCCAAATGAGGC
rJMFF037L04- AGGTGAGTACGTCAAGATTTAGCCTTTGCAGGAAAGTCCTTCCGGGGCTCCAAATGAGGC
rJMSF019A07- AGGTGAGTACGTCAAGATTTAGCCTTTGCAGGAAAGTCCTTCCGGGGCTCCAAATGAGGC
JMFN039F20+ AGGTGAGTACGTCAAGATTTAGCCTTGGCAGGAAAGTCCTTCCGGGGCTCCAAATGAGGC
____________________________________________________________
consensus AGGTGAGTACGTCAAGATTTAGCCTTTGCAGGAAAGTCCTTCCGGGGCTCCAAATGAGGC
. : . : . : . : . : . :
JMFS077G05+ TGCGAAGCAACTCCACTGCAGCTCGGTAAGCCATTATTCCCGGGGGACAATAACGGAGGA
JMFN003O18+ TGCGAAGCAACTCCACTGCAGCTCGGTAAGCCATTATTCCCGGGGGACAATAACGGAGGA
rJMFF044F01- TGCGAAGCAACTCCACTGCAGCTCGGTAAGCCATTATTCCCGGGGGACAATAACGGAGGA
rJMFF037L04- TGCGAAGCAACTCCACTGCAGCTCGGTAAGCCATTATTCCCGGGGGACAATAACGGAGGA
rJMSF019A07- TGCGAAGCAACTCCACTGCAGCTCGGTAAGCCATTATTCCCGGGGGACAATAACGGAGGA
JMFN039F20+ TGCGAAGCAACTCCACTGCAGCTCGGTAAGCCATTATTCCCGGGGGACAATAACGGAGGA
____________________________________________________________
consensus TGCGAAGCAACTCCACTGCAGCTCGGTAAGCCATTATTCCCGGGGGACAATAACGGAGGA
. : . : . : . : . : . :
JMFS077G05+ GTTGATGGCGGTAGATCCTGAGATGCGTGCTTGTCTAGT
JMFN003O18+ GTTGATGGCGGTAGATCCTGAGATGCGTGCTTGTCTAGTTGTCCAGAATTGGATGATGGG
rJMFF044F01- GTTGATGGCGGTAGATCCTGAGATGCGTGCTTGTCTAGTTGTCCAGAATTGGATGATGGG
rJMFF037L04- GTTGATGGCGGTAGATCCTGAGATGCGTGCTTGTCTAGTTGTCCAGAATTGGATGATGGG
rJMSF019A07- GTTGATGGCGGTAGATCCTGAGATGCGTGCTTGTCTAGTTGTCCAGAATTGGATGATGGG
JMFN039F20+ GTTGATGGCGGTAGATCCTGAGATGCGTGCTTGTCTAGTTGTCCAGAATTGGATGATGGG
____________________________________________________________
consensus GTTGATGGCGGTAGATCCTGAGATGCGTGCTTGTCTAGTTGTCCAGAATTGGATGATGGG
. : . : . : . : . : . :
JMFN003O18+ AAATCGTTTGGGAACAAGTTGTAGGAA
rJMFF044F01- AAATCGTTTGGGAACAAGTTGTAGGAATCGAATATCGGGAGATCAAAGTATCCATCCGAT
rJMFF037L04- AAATCGTTTGGGAACAAGTTGTAGGAATCGAATATCGGGAGATCAAAGTATCCATCCGAT
rJMSF019A07- AAATCGTTTGGGAACAAGTTGTAGGAATCGAATATCGGGAGATCAAAGTATCCATCCGAT
JMFN039F20+ AAATCGTTTGGGAACAAGTTGTAGGAATCGAATATCGGGAGATCAAAGTATCCATCCGAT
____________________________________________________________
consensus AAATCGTTTGGGAACAAGTTGTAGGAATCGAATATCGGGAGATCAAAGTATCCATCCGAT
. : . : . : . : . : . :
rJMFF044F01- GACTGAGCATATGAAGGGTTGAATTGCGGCTGGGGGGCTTGCTCGTAGGCTAGACAGTCC
rJMFF037L04- GACTGAGCATATGAAGGGTTGAATTGCGGCTGGGGGGCTTGCTCGTAGGCTAGACAGTCC
rJMSF019A07- GACTGAGCATATGAAGGGTTGAATTGCGGCTGGGGGGCTTGCTCGTAGGCTAGACAGTCC
JMFN039F20+ GACTGAGCATATGAAGGGTTGAATTGCGGCTGGGGGGCTTGCTCGTAGGCTAGACAGTCC
____________________________________________________________
consensus GACTGAGCATATGAAGGGTTGAATTGCGGCTGGGGGGCTTGCTCGTAGGCTAGACAGTCC
. : . : . : . : . : . :
rJMFF044F01- TCGACTGGTATTGCCCCTGTTAGGGTTTTGAACGCGAATTCTAGGCATGGGTCTGA
rJMFF037L04- TCGACTGGTATTGCCCCTGTTAGGGTTTTGAACGCGAATTCTAGGCATGGGTCTGACCAG
rJMSF019A07- TCGACTGGTATTGCCCCTGTTAGGGTTTTGAACGCGAATTCTAGGCATGGGTCTGACCAG
JMFN039F20+ TCGACTGGTATTGCCCCTGTTAGGGTTTTGAACGCGAATTCTAGGCATGGGTCTGACCAG
____________________________________________________________
consensus TCGACTGGTATTGCCCCTGTTAGGGTTTTGAACGCGAATTCTAGGCATGGGTCTGACCAG
. : . : . : . : . : . :
rJMFF037L04- CAGTCCCCGAAGGGGTACCGAAGTTGTGAGTCTTCCAATGTTTGGTTCTCGGTTACTGGT
rJMSF019A07- CAGTCCCCGAAGGGGTACCGAAGTTGTGAATCTTCCAATGTTTGGTTCTCGGTTACTGGT
JMFN039F20+ CAGTCCCCGAAGGGGTACCGAAGTTGTGAATCTTCCAATGTTTGGTTCTCGGTTACTGGT
____________________________________________________________
consensus CAGTCCCCGAAGGGGTACCGAAGTTGTGAATCTTCCAATGTTTGGTTCTCGGTTACTGGT
. : . : . : . : . : . :
rJMFF037L04- TCTGGTATTGGATTCTCTGAAACAGCCTCTTTCTCTACTGATTCAGTTGCCTTTGTTGGC
rJMSF019A07- TCTGGTATTGGATTCTCTGAAACAGCCTCTTTCTCTACTGATTCAGTTGCCTTTGTTGGC
JMFN039F20+ TCTGGTATTGGATTCTCTGAAACAGCCTCTTTCTCTACTGATTCAGTTGCCTTTGTTGGC
____________________________________________________________
consensus TCTGGTATTGGATTCTCTGAAACAGCCTCTTTCTCTACTGATTCAGTTGCCTTTGTTGGC
. : . : . : . : . : . :
rJMFF037L04- TCGTCGTGTTGCTTANGCATTTCTTGATCCGAGAGATTATTCGGGGCTGGGAACCGGAGA
rJMSF019A07- TCGTCGTGTTGCTTAGGCATTTCTTGATCCGAGAGATTATTCGGGGCT-GGAACCGGAGA
JMFN039F20+ TCGTCGTGTTGCTTAGGCATTTCTTGATCCGAGAGATTATTCGGGGCT-GGAACCGGAGA
____________________________________________________________
consensus TCGTCGTGTTGCTTAGGCATTTCTTGATCCGAGAGATTATTCGGGGCT-GGAACCGGAGA
. : . : . : . : . : . :
rJMFF037L04- TGCATCTGCTTCA
rJMSF019A07- TGCATCTGCTTCA
JMFN039F20+ TGCATCTGCTTCAGTTCCACCAGAATTCTTCACAGAATCTACTTCTCGGGGTGGATTGAT
____________________________________________________________
consensus TGCATCTGCTTCAGTTCCACCAGAATTCTTCACAGAATCTACTTCTCGGGGTGGATTGAT