Contig 010378:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF005B18Sequence563010378 (15)ref|XP_009627502.1|2e-33PREDICTED: uncharacterized protein LOC104118037 isoform X2 [Nicotiana tomentosi562010378 (15)ref|XP_009627502.1|2e-33PREDICTED: uncharacterized protein LOC104118037 isoform X2 [Nicotiana tomentosi
JMFF024H15Sequence450010378 (15)ref|XP_009627502.1|6e-34PREDICTED: uncharacterized protein LOC104118037 isoform X2 [Nicotiana tomentosi530010378 (15)ref|XP_009627502.1|1e-33PREDICTED: uncharacterized protein LOC104118037 isoform X2 [Nicotiana tomentosi
JMFF030N05Sequence527010378 (15)ref|XP_009627502.1|1e-33PREDICTED: uncharacterized protein LOC104118037 isoform X2 [Nicotiana tomentosi594010378 (15)ref|XP_009627502.1|3e-33PREDICTED: uncharacterized protein LOC104118037 isoform X2 [Nicotiana tomentosi
JMFF033E10Sequence547010378 (15)ref|XP_009627502.1|2e-33PREDICTED: uncharacterized protein LOC104118037 isoform X2 [Nicotiana tomentosi524010378 (15)ref|XP_009627502.1|1e-33PREDICTED: uncharacterized protein LOC104118037 isoform X2 [Nicotiana tomentosi
JMFN031C24Sequence464010378 (15)ref|XP_011096869.1|2e-18PREDICTED: uncharacterized protein LOC105175919 isoform X2 [Sesamum indicum]
JMSF003H04Sequence374010378 (15)ref|XP_009627502.1|2e-34PREDICTED: uncharacterized protein LOC104118037 isoform X2 [Nicotiana tomentosi474010378 (15)ref|XP_009627502.1|8e-34PREDICTED: uncharacterized protein LOC104118037 isoform X2 [Nicotiana tomentosi
JMSF020K07Sequence571010378 (15)ref|XP_009627502.1|2e-33PREDICTED: uncharacterized protein LOC104118037 isoform X2 [Nicotiana tomentosi520010378 (15)ref|XP_009627502.1|1e-33PREDICTED: uncharacterized protein LOC104118037 isoform X2 [Nicotiana tomentosi
JMSF020L07Sequence574010378 (15)ref|XP_009627502.1|2e-33PREDICTED: uncharacterized protein LOC104118037 isoform X2 [Nicotiana tomentosi520010378 (15)ref|XP_009627502.1|1e-33PREDICTED: uncharacterized protein LOC104118037 isoform X2 [Nicotiana tomentosi

Alignment

This contig is upended


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JMFF030N05-                                    ACTTGGCTAAGGTCGAAAAGCCTAAATTCCACCAT
rJMSF020L07+                                                                GACCAT
rJMSF020K07+                                                                GACCAT
rJMFF030N05+                                   ACTTGGCTAAGGTCGAAAAGCCTAAATTCCACCAT
JMSF020L07-                                                                 GACCAT
JMFF005B18-                                                                      T
rJMFF005B18+                                                                     T
JMSF020K07-                                                                 GACCAT
                      ____________________________________________________________
consensus                                      ACTTGGCTAAGGTCGAAAAGCCTAAATTCGACCAT
 
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JMFF024H15-                            GATCAACTCTAGGGTTTCATTCCCCTTACCAGAGTCGAAATCG
JMSF003H04-                            GATCAACTCTAGGGTTTCATTCCCCTTACCAGAGTCGAAATCG
JMFF030N05-           TTACCACACTCCTCACTGATCAACTCTAGGGTTTCATTCCCCTTACCAGAGTCGAAATCG
rJMSF020L07+          TTACCACACTCCTCACTGATCAACTCTAGGGTTTCATTCCCCTTACCAGAGTCGAAATCG
rJMSF020K07+          TTACCACACTCCTCACTGATCAACTCTAGGGTTTCATTCCCCTTACCAGAGTCGAAATCG
rJMFF030N05+          TTACCACACTCCTCACTGATCAACTCTAGGGTTTCATTCCCCTTACCAGAGTCGAAATCG
JMSF020L07-           TTACCACACTCCTCACTGATCAACTCTAGGGTTTCATTCCCCTTACCAGAGTCGAAATCG
JMFF005B18-           TTACCACACTCCTCACTGATCAACTCTAGGGTTTCATTCCCCTTACCAGAGTCGAAATCG
rJMFF024H15+                           GATCAACTCTAGGGTTTCATTCCCCTTACCAGAGTCGAAATCG
JMFF033E10-                                AACTCTAGGGTTTCATTCCCCTTACCAGAGTCGAAATCG
rJMFF005B18+          TTACCACACTCCTCACTGATCAACTCTAGGGTTTCATTCCCCTTACCAGAGTCGAAATCG
rJMFF033E10+                               AACTCTAGGGTTTCATTCCCCTTACCAGAGTCGAAATCG
rJMSF003H04+                           GATCAACTCTAGGGTTTCATTCCCCTTACCAGAGTCGAAATCG
JMSF020K07-           TTACCACACTCCTCACTGATCAACTCTAGGGTTTCATTCCCCTTACCAGAGTCGAAATCG
                      ____________________________________________________________
consensus             TTACCACACTCCTCACTGATCAACTCTAGGGTTTCATTCCCCTTACCAGAGTCGAAATCG
 
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JMFF024H15-           GAGGAAGAGGTAGAAGAAGATGCCGCTAAGCGCGACGGTGGTGGGAGCCCTACTGGGATT
JMSF003H04-           GAGGAAGAGGTAGAAGAAGATGCCGCTAAGCGCGACGGTGGTGGGAGCCCTACTGGGATT
JMFF030N05-           GAGGAAGAGGTAGAAGAAGATGCCGCTAAGCGCGACGGTGGTGGGAGCCCTACTGGGATT
rJMSF020L07+          GAGGAAGAGGTAGAAGAAGATGCCGCTAAGCGCGACGGTGGTGGGAGCCCTACTGGGATT
rJMSF020K07+          GAGGAAGAGGTAGAAGAAGATGCCGCTAAGCGCGACGGTGGTGGGAGCCCTACTGGGATT
rJMFF030N05+          GAGGAAGAGGTAGAAGAAGATGCCGCTAAGCGCGACGGTGGTGGGAGCCCTACTGGGATT
JMSF020L07-           GAGGAAGAGGTAGAAGAAGATGCCGCTAAGCGCGACGGTGGTGGGAGCCCTACTGGGATT
JMFF005B18-           GAGGAAGAGGTAGAAGAAGATGCCGCTAAGCGCGACGGTGGTGGGAGCCCTACTGGGATT
rJMFF024H15+          GAGGAAGAGGTAGAAGAAGATGCCGCTAAGCGCGACGGTGGTGGGAGCCCTACTGGGATT
JMFF033E10-           GAGGAAGAGGTAGAAGAAGATGCCGCTAAGCGCGACGGTGGTGGGAGCCCTACTGGGATT
rJMFF005B18+          GAGGAAGAGGTAGAAGAAGATGCCGCTAAGCGCGACGGTGGTGGGAGCCCTACTGGGATT
rJMFF033E10+          GAGGAAGAGGTAGAAGAAGATGCCGCTAAGCGCGACGGTGGTGGGAGCCCTACTGGGATT
rJMSF003H04+          GAGGAAGAGGTAGAAGAAGATGCCGCTAAGCGCGACGGTGGTGGGAGCCCTACTGGGATT
JMSF020K07-           GAGGAAGAGGTAGAAGAAGATGCCGCTAAGCGCGACGGTGGTGGGAGCCCTACTGGGATT
                      ____________________________________________________________
consensus             GAGGAAGAGGTAGAAGAAGATGCCGCTAAGCGCGACGGTGGTGGGAGCCCTACTGGGATT
 
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JMFF024H15-           GGGCACCCAGATGTACTCCAATGCCCTCCGCAAACTCCCTTACATGCGCCATCCGTGGGA
JMSF003H04-           GGGCACCCAGATGTACTCCAATGCCCTCCGCAAACTCCCTTACATGCGCCATCCGTGGGA
JMFF030N05-           GGGCACCCAGATGTACTCCAATGCCCTCCGCAAACTCCCTTACATGCGCCATCCGTGGGA
rJMSF020L07+          GGGCACCCAGATGTACTCCAATGCCCTCCGCAAACTCCCTTACATGCGCCATCCGTGGGA
rJMSF020K07+          GGGCACCCAGATGTACTCCAATGCCCTCCGCAAACTCCCTTACATGCGCCATCCGTGGGA
rJMFF030N05+          GGGCACCCAGATGTACTCCAATGCCCTCCGCAAACTCCCTTACATGCGCCATCCGTGGGA
JMSF020L07-           GGGCACCCAGATGTACTCCAATGCCCTCCGCAAACTCCCTTACATGCGCCATCCGTGGGA
JMFF005B18-           GGGCACCCAGATGTACTCCAATGCCCTCCGCAAACTCCCTTACATGCGCCATCCGTGGGA
rJMFF024H15+          GGGCACCCAGATGTACTCCAATGCCCTCCGCAAACTCCCTTACATGCGCCATCCGTGGGA
JMFF033E10-           GGGCACCCAGATGTACTCCAATGCCCTCCGCAAACTCCCTTACATGCGCCATCCGTGGGA
rJMFF005B18+          GGGCACCCAGATGTACTCCAATGCCCTCCGCAAACTCCCTTACATGCGCCATCCGTGGGA
rJMFF033E10+          GGGCACCCAGATGTACTCCAATGCCCTCCGCAAACTCCCTTACATGCGCCATCCGTGGGA
rJMSF003H04+          GGGCACCCAGATGTACTCCAATGCCCTCCGCAAACTCCCTTACATGCGCCATCCGTGGGA
JMSF020K07-           GGGCACCCAGATGTACTCCAATGCCCTCCGCAAACTCCCTTACATGCGCCATCCGTGGGA
JMFN031C24+                             CAATGCCCTCCGCAAACTCCCTTACATGCGCCATCCGTGGGA
                      ____________________________________________________________
consensus             GGGCACCCAGATGTACTCCAATGCCCTCCGCAAACTCCCTTACATGCGCCATCCGTGGGA
 
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JMFF024H15-           GCATGTGTTGGGGATGGGAATCGGAGCGGTTTTCGCCAATCAGATGGTCAAATGGGAAGT
JMSF003H04-           GCATGTGTTGGGGATGGGAATCGGAGCGGTTTTCGCCAATCAGATGGTCAAATGGGAAGT
JMFF030N05-           GCATGTGTTGGGGATGGGAATCGGAGCGGTTTTCGCCAATCAGATGGTCAAATGGGAAGT
rJMSF020L07+          GCATGTGTTGGGGATGGGAATCGGAGCGGTTTTCGCCAATCAGATGGTCAAATGGGAAGT
rJMSF020K07+          GCATGTGTTGGGGATGGGAATCGGAGCGGTTTTCGCCAATCAGATGGTCAAATGGGAAGT
rJMFF030N05+          GCATGTGTTGGGGATGGGAATCGGAGCGGTTTTCGCCAATCAGATGGTCAAATGGGAAGT
JMSF020L07-           GCATGTGTTGGGGATGGGAATCGGAGCGGTTTTCGCCAATCAGATGGTCAAATGGGAAGT
JMFF005B18-           GCATGTGTTGGGGATGGGAATCGGAGCGGTTTTCGCCAATCAGATGGTCAAATGGGAAGT
rJMFF024H15+          GCATGTGTTGGGGATGGGAATCGGAGCGGTTTTCGCCAATCAGATGGTCAAATGGGAAGT
JMFF033E10-           GCATGTGTTGGGGATGGGAATCGGAGCGGTTTTCGCCAATCAGATGGTCAAATGGGAAGT
rJMFF005B18+          GCATGTGTTGGGGATGGGAATCGGAGCGGTTTTCGCCAATCAGATGGTCAAATGGGAAGT
rJMFF033E10+          GCATGTGTTGGGGATGGGAATCGGAGCGGTTTTCGCCAATCAGATGGTCAAATGGGAAGT
rJMSF003H04+          GCATGTGTTGGGGATGGGAATCGGAGCGGTTTTCGCCAATCAGATGGTCAAATGGGAAGT
JMSF020K07-           GCATGTGTTGGGGATGGGAATCGGAGCGGTTTTCGCCAATCAGATGGTCAAATGGGAAGT
JMFN031C24+           GCATGTGTTGGGGATGGGAATCGGAGCGGTTTTCGCCAATCAGATGGTCAAATGGGAAGT
                      ____________________________________________________________
consensus             GCATGTGTTGGGGATGGGAATCGGAGCGGTTTTCGCCAATCAGATGGTCAAATGGGAAGT
 
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JMFF024H15-           CAAAGCTCAAGAAGACCTTGACAAATTGCTGTTAAAGGCGAAGGAAGCCAACGAGCGCCG
JMSF003H04-           CAAAGCTCAAGAAGACCTTGACAAATTGCTGTTAAAGGCGAAGGAAGCCAACGAGCGCCG
JMFF030N05-           CAAAGCTCAAGAAGACCTTGACAAATTGCTGTTAAAGGCGAAGGAAGCCAACGAGCGCCG
rJMSF020L07+          CAAAGCTCAAGAAGACCTTGACAAATTGCTGTTAAAGGCGAAGGAAGCCAACGAGCGCCG
rJMSF020K07+          CAAAGCTCAAGAAGACCTTGACAAATTGCTGTTAAAGGCGAAGGAAGCCAACGAGCGCCG
rJMFF030N05+          CAAAGCTCAAGAAGACCTTGACAAATTGCTGTTAAAGGCGAAGGAAGCCAACGAGCGCCG
JMSF020L07-           CAAAGCTCAAGAAGACCTTGACAAATTGCTGTTAAAGGCGAAGGAAGCCAACGAGCGCCG
JMFF005B18-           CAAAGCTCAAGAAGACCTTGACAAATTGCTGTTAAAGGCGAAGGAAGCCAACGAGCGCCG
rJMFF024H15+          CAAAGCTCAAGAAGACCTTGACAAATTGCTGTTAAAGGCGAAGGAAGCCAACGAGCGCCG
JMFF033E10-           CAAAGCTCAAGAAGACCTTGACAAATTGCTGTTAAAGGCGAAGGAAGCCAACGAGCGCCG
rJMFF005B18+          CAAAGCTCAAGAAGACCTTGACAAATTGCTGTTAAAGGCGAAGGAAGCCAACGAGCGCCG
rJMFF033E10+          CAAAGCTCAAGAAGACCTTGACAAATTGCTGTTAAAGGCGAAGGAAGCCAACGAGCGCCG
rJMSF003H04+          CAAAGCTCAAGAAGACCTTGACAAATTGCTGTTAAAGGCGAAGGAAGCCAACGAGCGCCG
JMSF020K07-           CAAAGCTCAAGAAGACCTTGACAAATTGCTGTTAAAGGCGAAGGAAGCCAACGAGCGCCG
JMFN031C24+           CAAAGCTCAAGAAGACCTTGACAAATTGCTGTTAAAGGCGAAGGAAGCCAACGAGGGCCG
                      ____________________________________________________________
consensus             CAAAGCTCAAGAAGACCTTGACAAATTGCTGTTAAAGGCGAAGGAAGCCAACGAGCGCCG
 
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JMFF024H15-           TTACTTTGATGATGAAGATTAATGCTGGGCACCACACTTAACAAAGAATAAGGTGTGCCT
JMSF003H04-           TTACTTTGATGATGAAGATTAATGCTGGGCACCACACTTAACAAAGAATAAGGTGTGCCT
JMFF030N05-           TTACTTTGATGATGAAGATTAATGCTGGGCACCACACTTAACAAAGAATAAGGTGTGCCT
rJMSF020L07+          TTACTTTGATGATGAAGATTAATGCTGGGCACCACACTTAACAAAGAATAAGGTGTGCCT
rJMSF020K07+          TTACTTTGATGATGAAGATTAATGCTGGGCACCACACTTAACAAAGAATAAGGTGTGCCT
rJMFF030N05+          TTACTTTGATGATGAAGATTAATGCTGGGCACCACACTTAACAAAGAATAAGGTGTGCCT
JMSF020L07-           TTACTTTGATGATGAAGATTAATGCTGGGCACCACACTTAACAAAGAATAAGGTGTGCCT
JMFF005B18-           TTACTTTGATGATGAAGATTAATGCTGGGCACCACACTTAACAAAGAATAAGGTGTGCCT
rJMFF024H15+          TTACTTTGATGATGAAGATTAATGCTGGGCACCACACTTAACAAAGAATAAGGTGTGCCT
JMFF033E10-           TTACTTTGATGATGAAGATTAATGCTGGGCACCACACTTAACAAAGAATAAGGTGTGCCT
rJMFF005B18+          TTACTTTGATGATGAAGATTAATGCTGGGCACCACACTTAACAAAGAATAAGGTGTGCCT
rJMFF033E10+          TTACTTTGATGATGAAGATTAATGCTGGGCACCACACTTAACAAAGAATAAGGTGTGCCT
rJMSF003H04+          TTACTTTGATGATGAAGATTAATGCTGGGCACCACACTTAACAAAGAATAAGGTGTGCCT
JMSF020K07-           TTACTTTGATGATGAAGATTAATGCTGGGCACCACACTTAACAAAGAATAAGGTGTGCCT
JMFN031C24+           TTATTTTGATGATGAAGATTAATGTTGGGCCCCCCCCTTAACAAAGAATAAGGTGTGCCT
                      ____________________________________________________________
consensus             TTACTTTGATGATGAAGATTAATGCTGGGCACCACACTTAACAAAGAATAAGGTGTGCCT
 
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JMFF024H15-           AGTGGCTTGAGCTGTGTGTTATGTAGACAATTTTTTTGGCTCGACCAGTCTACTCTTTTC
JMSF003H04-           AGTGGCTTGAGCTGTGTGTTATGTAGAC                                
JMFF030N05-           AGTGGCTTGAGCTGTGTGTTATGTAGACAATTTTTTTGGCTCGACCAGTCTACTCTTTTC
rJMSF020L07+          AGTGGCTTGAGCTGTGTGTTATGTAGACAATTTTTTTGGCTCGACCAGTCTACTCTTTTC
rJMSF020K07+          AGTGGCTTGAGCTGTGTGTTATGTAGACAATTTTTTTGGCTCGACCAGTCTACTCTTTTC
rJMFF030N05+          AGTGGCTTGAGCTGTGTGTTATGTAGACAATTTTTTTGGCTCGACCAGTCTACTCTTTTC
JMSF020L07-           AGTGGCTTGAGCTGTGTGTTATGTAGACAATTTTTTTGGCTCGACCAGTCTACTCTTTTC
JMFF005B18-           AGTGGCTTGAGCTGTGTGTTATGTAGACAATTTTTTTGGCTCGACCAGTCTACTCTTTTC
rJMFF024H15+          AGTGGCTTGAGCTGTGTGTTATGTAGACAATTTTTTTGGCTCGACCAGTCTACTCTTTTC
JMFF033E10-           AGTGGCTTGAGCTGTGTGTTATGTAGACAATTTTTTTGGCTCGACCAGTCTACTCTTTTC
rJMFF005B18+          AGTGGCTTGAGCTGTGTGTTATGTAGACAATTTTTTTGGCTCGACCAGTCTACTCTTTTC
rJMFF033E10+          AGTGGCTTGAGCTGTGTGTTATGTAGACAATTTTTTTGGCTCGACCAGTCTACTCTTTTC
rJMSF003H04+          AGTGGCTTGAGCTGTGTGTTATGTAGACAATTTTTTTGGCTCGACCAGTCTACTCTTTTC
JMSF020K07-           AGTGGCTTGAGCTGTGTGTTATGTAGACAATTTTTTTGGCTCGACCAGTCTACTCTTTTC
JMFN031C24+           AGTGGCTTGAGCTGTGTGTTATGTAGACAATTTTTTTGGCTTGACCAGTTTACTTTTTTT
                      ____________________________________________________________
consensus             AGTGGCTTGAGCTGTGTGTTATGTAGACAATTTTTTTGGCTCGACCAGTCTACTCTTTTC
 
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JMFF024H15-           GTAAGATTGTTTTTTTATGATGTTATTTTGAAATGGATTATTTAATC             
JMFF030N05-           GTAAGATTGTTTTTTTATGATGTTATTTTGAAATGGATTATTTAATCCATGCCAGAATAA
rJMSF020L07+          GTAAGATTGTTTTTTTATGATGTTATTTTGAAATGGATTATTTAATCCATGCCAGAATAA
rJMSF020K07+          GTAAGATTGTTTTTTTATGATGTTATTTTGAAATGGATTATTTAATCCATGCCAGAATAA
rJMFF030N05+          GTAAGATTGTTTTTTTATGATGTTATTTTGAAATGGATTATTTAATCCATGCCAGAATAA
JMSF020L07-           GTAAGATTGTTTTTTTATGATGTTATTTTGAAATGGATTATTTAATCCATGCCAGAATAA
JMFF005B18-           GTAAGATTGTTTTTTTATGATGTTATTTTGAAATGGATTATTTAATCCATGCCAGAATAA
rJMFF024H15+          GTAAGATTGTTTTTTTATGATGTTATTTTGAAATGGATTATTTAATCCATGCCAGAATAA
JMFF033E10-           GTAAGATTG--TTTTTATGATGTTATTTTGAAATGGATTATTTAATCCATGCCAGAATAA
rJMFF005B18+          GTAAGATTGTTTTTTTATGATGTTATTTTGAAATGGATTATTTAATCCATGCCAGAATAA
rJMFF033E10+          GTAAGATTG--TTTTTATGATGTTATTTTGAAATGGATTATTTAATCCATGCCAGAATAA
rJMSF003H04+          GTAAGATTGTTTTTTTATGATGTTATTTTGAAATGGATTATTTAATCCATGCCAGAATAA
JMSF020K07-           GTAAGATTGTTTTTTTATGATGTTATTTTGAAATGGATTATTTAATCCATGCCAGAATAA
JMFN031C24+           GTAAGATTGTTTTTTTAAGATGTTATTTTGAAATGGGTTATTTAATCCATGCCAGAATAA
                      ____________________________________________________________
consensus             GTAAGATTGTTTTTTTATGATGTTATTTTGAAATGGATTATTTAATCCATGCCAGAATAA
 
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JMFF030N05-           TAAAAGATCCAC                                                
rJMSF020L07+          TAAAAGATCCACATCACCTCTAAAACTGACTTTT                          
rJMSF020K07+          TAAAAGATCCACATCACCTCTAAAACTGACTTTT                          
rJMFF030N05+          TAAAAGATCCACATCACCTCTAAAACTGACTTTTTGTTTTTTTGGCCATTGCTGATAATG
JMSF020L07-           TAAAAGATCCACATCACCTCTAAAACTGACTTTTTGTTTTTTTGGCCATTGCTGATAATG
JMFF005B18-           TAAAAGATCCACATCACCTCTAAAACTGACTTTTTGTTTTTTTGGCCATTGCTGATAATG
rJMFF024H15+          TAAAAGATCCACATCACCTCTAAAACTGACTTTTTGTTTTTTTGGCCATTGCTGATAATG
JMFF033E10-           TAAAAGATCCACATCACCTCTAAAACTGACTTTTTGTTTTTTTGGCCATTGCTGATAATG
rJMFF005B18+          TAAAAGATCCACATCACCTCTAAAACTGACTTTTTGTTTTTTTGGCCATTGCTGATAATG
rJMFF033E10+          TAAAAGATCCACATCACCTCTAAAACTGACTTTTTGTTTTTTTGGCCATTGCNGATAA  
rJMSF003H04+          TAAAAGATCC                                                  
JMSF020K07-           TAAAAGATCCACATCACCTCTAAAACTGACTTTTTGTTTTTTTGGCCATTGCTGATAATG
JMFN031C24+           TAAAAGATCCCCATCCCCTTTAAAACTGACTTTTTGTTTTTTTGGCCATTGCGGATAATG
                      ____________________________________________________________
consensus             TAAAAGATCCACATCACCTCTAAAACTGACTTTTTGTTTTTTTGGCCATTGCTGATAATG
 
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rJMFF030N05+          AACAAACTTTATT                                               
JMSF020L07-           AACAAACTTTATTTCC                                            
JMFF005B18-           AACAAACTTTATTTCCTCT                                         
rJMFF024H15+          AACAAAC                                                     
JMFF033E10-           AACAAACTTTATTTCC                                            
rJMFF005B18+          AACAAACTTTATTTCCTCT                                         
JMSF020K07-           AACAAACTTTATTTCCTCTT                                        
JMFN031C24+           AACAAACTTTATTTCCTTTTGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCTCGAG
                      ____________________________________________________________
consensus             AACAAACTTTATTTCCTCTTGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTCGAG