Contig 010377:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFN025M08Sequence612010377 (4)ref|XP_009617824.1|3e-45PREDICTED: olee1-like protein [Nicotiana tomentosiformis]
JMFN029O10Sequence629010377 (4)ref|XP_009617824.1|3e-45PREDICTED: olee1-like protein [Nicotiana tomentosiformis]
JMFN031C03Sequence613010377 (4)ref|XP_009617824.1|3e-45PREDICTED: olee1-like protein [Nicotiana tomentosiformis]
JMFN035N22Sequence321010377 (4)ref|XP_009617824.1|5e-23PREDICTED: olee1-like protein [Nicotiana tomentosiformis]

Alignment

This contig is upended


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JMFN025M08+                                   GATAAAACTGGGATCATAGAAAACGGCATTGCATGC
JMFN029O10+                                       AAACTGGGATCATAGAAAACGGCATTGCATGC
JMFN031C03+                                                          CGGCATTGCATGC
                      ____________________________________________________________
consensus                                     GATAAAACTGGGATCATAGAAAACGGCATTGCATGC
 
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JMFN025M08+           GGTGTTG-TGAATTCAAGGGTGAATATCTTCTCCTGGGATGTAATGCAATTCCTTGAACA
JMFN029O10+           GGTGTTG-TGAATTCAAGGGTGAATATCTTCTCCTGGGATGTAATGCAATTCCTTGAACA
JMFN031C03+           GGTGTTGTTGATTTCAAGGGTGAATATCTTCTCCTGGGATGTAATGCAATTCCTTGAACA
                      ____________________________________________________________
consensus             GGTGTTG-TGAATTCAAGGGTGAATATCTTCTCCTGGGATGTAATGCAATTCCTTGAACA
 
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JMFN025M08+           CCTCAGCACAGACGGCACTTGGCTTGGACTTCAAGTACAAAATGGGGTTAACATTTCTGG
JMFN029O10+           CCTCAGCACAGACGGCACTTGGCTTGGACTTCAAGTACAAAATGGGGTTAACATTTCTGG
JMFN031C03+           CCTCAGCACAGACGGCACTTGGCTTGGACTTCAAGTACAAAATGGGGTTAACATTTCTGG
                      ____________________________________________________________
consensus             CCTCAGCACAGACGGCACTTGGCTTGGACTTCAAGTACAAAATGGGGTTAACATTTCTGG
 
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JMFN025M08+           TCTTTTTAACCATGCCATTCTTGGTTGTGAGGGTGATTCTTGTGAACTCTTTTGCCCACC
JMFN029O10+           TCTTTTTAACCATGCCATTCTTGGTTGTGAGGGTGATTCTTGTGAACTCTTTTGCCCACC
JMFN031C03+           TCTTTTTAACCATGCCATTCTTGGTTGTGAGGGTGATTCTTGTGAACTCTTTTGCCCACC
                      ____________________________________________________________
consensus             TCTTTTTAACCATGCCATTCTTGGTTGTGAGGGTGATTCTTGTGAACTCTTTTGCCCACC
 
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JMFN025M08+           CGTCCTTTATGATCTCGCTGCAGTCCTCTTTGCTGCTCTTCACCGGCTTGATTCCGCAAT
JMFN035N22+                                 GTCCTCTTTGCTGCTCTTCACCGGCTTGATTCCGCAAT
JMFN029O10+           CGTCCTTTATGATCTCGCTGCAGTCCTCTTTGCTGCTCTTCACCGGCTTGATTCCGCAAT
JMFN031C03+           CGTCCTTTATGATCTCGCTGCAGTCCTCTTTGCTGCTCTTCACCGGCTTGATTCCGCAAT
                      ____________________________________________________________
consensus             CGTCCTTTATGATCTCGCTGCAGTCCTCTTTGCTGCTCTTCACCGGCTTGATTCCGCAAT
 
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JMFN025M08+           ACTCGTCCTCGTGGTCGCCCTCCGCAGTGATGTGGTAGACGCCGTTGGCGTCGGTTTCAC
JMFN035N22+           ACTCGTCCTCGTGGTCGCCCTCCGCAGTGATGTGGTAGACGCCGTTGGCGTCGGTTTCAC
JMFN029O10+           ACTCGTCCTCGTGGTCGCCCTCCGCAGTGATGTGGTAGACGCCGTTGGCGTCGGTTTCAC
JMFN031C03+           ACTCGTCCTCGTGGTCGCCCTCCGCAGTGATGTGGTAGACGCCGTTGGCGTCGGTTTCAC
                      ____________________________________________________________
consensus             ACTCGTCCTCGTGGTCGCCCTCCGCAGTGATGTGGTAGACGCCGTTGGCGTCGGTTTCAC
 
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JMFN025M08+           CGTCCACGCTATAGGTGGATTTCCCGTCTGTTATGTTGTGGCACTCCAATCTCACCTTCG
JMFN035N22+           CGTCCACGCTATAGGTGGATTTCCCGTCGGTTATGTTGTGGCACTCCAATCTCACCTTCG
JMFN029O10+           CGTCCACGCTATAGGTGGATTTCCCGTCTGTTATGTTGTGGCACTCCAATCTCACCTTCG
JMFN031C03+           CGTCCACGCTATAGGTGGATTTCCCGTCTGTTATGTTGTGGCACTCCAATCTCACCTTCG
                      ____________________________________________________________
consensus             CGTCCACGCTATAGGTGGATTTCCCGTCTGTTATGTTGTGGCACTCCAATCTCACCTTCG
 
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JMFN025M08+           CACCGGGCATCCTTTCAGCGACTCTGGTGACAAATTTGGCACGACACACGTCACAATATA
JMFN035N22+           CACCGGGCATCCTTTCAGCGACTCTGGTGACAAATTTGGCACGACACACGTCACAATATA
JMFN029O10+           CACCGGGCATCCTTTCAGCGACTCTGGTGACAAATTTGGCACGACACACGTCACAATATA
JMFN031C03+           CACCGGGCATCCTTTCAGCGACTCTGGTGACAAATTTGGCACGACACACGTCACAATATA
                      ____________________________________________________________
consensus             CACCGGGCATCCTTTCAGCGACTCTGGTGACAAATTTGGCACGACACACGTCACAATATA
 
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JMFN025M08+           CCGTGCCAGTGACTTCGAATTTCTCGCCGGCTCCGGCTTTCTCGGCGGCTCCGGCGACGC
JMFN035N22+           CCGTGCCAGTGACTTCGAATTTATCGCCGGCTCCGGCTTTCTCGGCGGCTCCGGCGACGC
JMFN029O10+           CCGTGCCAGTGACTTCGAATTTCTCGCCGGCTCCGGCTTTCTCGGCGGCTCCGGCGACGC
JMFN031C03+           CCGTGCCAGTGACTTCGAATTTCTCGCCGGCTCCGGCTTTCTCGGCGGCTCCGGCGACGC
                      ____________________________________________________________
consensus             CCGTGCCAGTGACTTCGAATTTCTCGCCGGCTCCGGCTTTCTCGGCGGCTCCGGCGACGC
 
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JMFN025M08+           CAAGCACAGACACCAAGGCAACAATGGCGGCAATGTGAAGTGCCGAATGAATTCTGTTTT
JMFN035N22+           CAAGCACAGACACCAAGGCAACAATGGCGGCAATGAGAAGTGC                 
JMFN029O10+           CAAGCACAGACACCAAGGCAACAATGGCGGCAATGAGAAGTGCCGAATGAATTCTGTTTT
JMFN031C03+           CAAGCACAGACACCAAGGCAACAATGGCGGCAATGAGAAGTGCCGAATGAATTCTGTTTT
                      ____________________________________________________________
consensus             CAAGCACAGACACCAAGGCAACAATGGCGGCAATGAGAAGTGCCGAATGAATTCTGTTTT
 
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JMFN025M08+           CCATTTTTATATTTTGTTTTAATTTAAATTTTTTGTT                       
JMFN029O10+           CCATTTTTATATTTTTTTTTAATTTAAATTTTTTGTTTATTTAGTGAAAGATGGATGT  
JMFN031C03+           CCATTTTTATATTTTTTTTTAATTTAAATTTTTTGTTTATTTAGTGAAAGATGGATGTTT
                      ____________________________________________________________
consensus             CCATTTTTATATTTTTTTTTAATTTAAATTTTTTGTTTATTTAGTGAAAGATGGATGTTT