Contig 010371:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFN028O08Sequence627010371 (3)ref|XP_009792706.1|238PREDICTED: uncharacterized protein LOC104239695 [Nicotiana sylvestris]
JMSF011G04Sequence366005004 (3)ref|XP_009799495.1|8e-30PREDICTED: uncharacterized protein LOC104245573 isoform X1 [Nicotiana sylvestri759010371 (3)ref|XP_009611123.1|2e-109PREDICTED: uncharacterized protein LOC104104686 isoform X3 [Nicotiana tomentosi
JMSF030H19Sequence653005004 (3)ref|XP_009611121.1|3e-119PREDICTED: uncharacterized protein LOC104104686 isoform X1 [Nicotiana tomentosi624010371 (3)ref|XP_009611123.1|2e-90PREDICTED: uncharacterized protein LOC104104686 isoform X3 [Nicotiana tomentosi

Alignment

This contig is upended


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rJMSF011G04+           TGAGGTGCCCGGACAGGCCAAAGCTGCTTTTCGACACAGTTTGCACTCTAACCGATATG
                      ____________________________________________________________
consensus              TGAGGTGCCCGGACAGGCCAAAGCTGCTTTTCGACACAGTTTGCACTCTAACCGATATG
 
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rJMSF030H19+                       ACCATGGTACNATCATCGCTGAAGGGCGCGAGGCTTATCAGGAATAC
rJMSF011G04+          CAATATGTAGTTTACCATGGTACAATCATCGCTGAAGGGCGCGAGGCTTATCAGGAATAC
                      ____________________________________________________________
consensus             CAATATGTAGTTTACCATGGTACAATCATCGCTGAAGGGCGCGAGGCTTATCAGGAATAC
 
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rJMSF030H19+          TACATTAGGCATACGGATGGGTGCCCCATAAGTTCTGAAGCNGAAAGGCAACGCTTAATT
rJMSF011G04+          TACATTAGGCATACGGATGGGTGCCCCATAAGTTCTGAAGCAGAAAGGCAACGCTTAATT
JMFN028O08-                                           TTCTGAAGCAGAAAGGCAACGCTTAATT
                      ____________________________________________________________
consensus             TACATTAGGCATACGGATGGGTGCCCCATAAGTTCTGAAGCAGAAAGGCAACGCTTAATT
 
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rJMSF030H19+          CATTGCTNGGAGGNGGCCATCAAGAGGCGAACATCCTCGGGGATAAGGCTGGAGCTGTGT
rJMSF011G04+          CATTGCTTGGAGGCGGCCATCAAGAGGCGAACATCCTCGGGGATAAGGCTGGAGCTGTGT
JMFN028O08-           CATTGCTTGGAGGCGGCCATCAAGAGGCGAACATCCTCGGGGATAAGGCTGGAGCTGTGT
                      ____________________________________________________________
consensus             CATTGCTTGGAGGCGGCCATCAAGAGGCGAACATCCTCGGGGATAAGGCTGGAGCTGTGT
 
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rJMSF030H19+          GGGGAAGACCGGGTTGGGCTTCTATCGGATGTAACGCGCATATTCCGAGAGAACGGGCTC
rJMSF011G04+          GGGGAAGACCGGGTTGGGCTTCTATCGGATGTAACGCGCATATTCCGAGAGAACGGGCTC
JMFN028O08-           GGGGAAGACCGGGTTGGGCTTCTATCGGATGTAACGCGCATATTCCGAGAGAACGGGCTC
                      ____________________________________________________________
consensus             GGGGAAGACCGGGTTGGGCTTCTATCGGATGTAACGCGCATATTCCGAGAGAACGGGCTC
 
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rJMSF030H19+          TCAGTCTCCCGAGCTGAGGTGACAACGCAAGGCTCACAAGCTGTGAACGCCTTTTATGTG
rJMSF011G04+          TCAGTCTCCCGAGCTGAGGTGACAACGCAAGGCTCACAAGCTGTGAACGCCTTTTATGTG
JMFN028O08-           TCAGTCTCCCGAGCTGAGGTGACAACGCAAGGCTCACAAGCTGTGAACGCCTTTTATGTG
                      ____________________________________________________________
consensus             TCAGTCTCCCGAGCTGAGGTGACAACGCAAGGCTCACAAGCTGTGAACGCCTTTTATGTG
 
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rJMSF030H19+          ACCGATGCATCGGGATNCCCGGTTAAAAGTGAAACGATCGAGGCNGTGAGGAAAGAGATC
rJMSF011G04+          ACCGATGCATCGGGATGCCCGGTTAAAAGTGAAACGATCGAGGCAGTGAGGAAAGAGATC
JMFN028O08-           ACCGATGCATCGGGATGCCCGGTTAAAAGTGAAACGATCGAGGCAGTGAGGAAAGAGATC
                      ____________________________________________________________
consensus             ACCGATGCATCGGGATGCCCGGTTAAAAGTGAAACGATCGAGGCAGTGAGGAAAGAGATC
 
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rJMSF030H19+          GGGCAAACCATCCTCCGCGTGAAGGACGACATGTACTCCAACTNGCCACCNCCACAGCAG
rJMSF011G04+          GGGCAAACCATCCTCCGCGTGAAGGACGACATGTACTCCAACTTGCCACCACCACAGCAG
JMFN028O08-           GGGCAAACCATCCTCCGCGTGAAGGACGACATGTACTCCAACTTGCCACCACCACAGCAG
                      ____________________________________________________________
consensus             GGGCAAACCATCCTCCGCGTGAAGGACGACATGTACTCCAACTTGCCACCACCACAGCAG
 
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rJMSF030H19+          CAAACCGGTAGATTCTCTCTCGGGAATTTGTTCAAATCGAGGTCAGAAAAATTTCTCTAC
rJMSF011G04+          CAAACCGGTAGATTCTCTCTCGGGAATTTGTTCAAATCGAGGTCAGAAAAATTTCTCTAC
JMFN028O08-           CAAACCGGTAGATTCTCTCTCGGGAATTTGTTCAAATCGAGGTCAGAAAAATTTCTCTAC
                      ____________________________________________________________
consensus             CAAACCGGTAGATTCTCTCTCGGGAATTTGTTCAAATCGAGGTCAGAAAAATTTCTCTAC
 
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rJMSF030H19+          AACCTGGGACTCATAAAATCGTGCTCCTCCTCGGCTGTCTGCTAGGTAGCTTAGTGCTCT
rJMSF011G04+          AACCTGGGACTCATAAAATCGTGCTCCTCCTCGGCTGTCTGCTAGGTAGCTTAGTGCTCT
JMFN028O08-           AACCTGGGACTCATAAAATCGTGCTCCTCCTCGGCTGTCTGCTAGGTAGCTTAGTGCTCT
                      ____________________________________________________________
consensus             AACCTGGGACTCATAAAATCGTGCTCCTCCTCGGCTGTCTGCTAGGTAGCTTAGTGCTCT
 
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rJMSF030H19+          TCCTAGGCTGTAAATNCATTATTGCTCTTTGGTAGCATAGTTATTGGCAGGGAGCCATAG
rJMSF011G04+          TCCTAGGCTGTAAATGCATTATTGCTCTTTGGTAGCATAGTTATTGGCAGGGAGCCATAG
JMFN028O08-           TCCTAGGCTGTAAATGCATTATTGCTCTTTGGTAGCATAGTTATTGGCAGGGAGCCATAG
                      ____________________________________________________________
consensus             TCCTAGGCTGTAAATGCATTATTGCTCTTTGGTAGCATAGTTATTGGCAGGGAGCCATAG
 
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rJMSF030H19+          TCTTAGTTTNATCATCTCAGNACTCAAGTCTGTAGCA                       
rJMSF011G04+          TCTTAGTTTTATCATCTCAGTACTCAAGTCTGTAGCATTAAAGCTTAAGTGTACATTCCC
JMFN028O08-           TCTTAGTTTTATCATCTCAGTACTCAAGTCTGTAGCATTAAAGCTTAAGTGTACATT-CC
                      ____________________________________________________________
consensus             TCTTAGTTTTATCATCTCAGTACTCAAGTCTGTAGCATTAAAGCTTAAGTGTACATTCCC
 
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rJMSF011G04+          TTGTTCTCTCCTGGAATTGTATATGCAGCAGATTCATCGT                    
JMFN028O08-           TTGTTCTCTCCTGGAATTGTATATGCAGCAGATTCATCGTTTTTCGACTAGTAGGAACAT
                      ____________________________________________________________
consensus             TTGTTCTCTCCTGGAATTGTATATGCAGCAGATTCATCGTTTTTCGACTAGTAGGAACAT