Contig 010369:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFN008B04Sequence493010369 (8)ref|XP_011087606.1|3e-29PREDICTED: NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 3-B [Sesam
JMFN013P07Sequence530010369 (8)ref|XP_011087606.1|2e-29PREDICTED: NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 3-B [Sesam
JMFN016M21Sequence529010369 (8)ref|XP_006385098.1|2e-29hypothetical protein POPTR_0004s23900g [Populus trichocarpa] gb|ABK94107.1| unkn
JMFN018K12Sequence493010369 (8)ref|XP_011087606.1|3e-29PREDICTED: NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 3-B [Sesam
JMFN025G23Sequence517010369 (8)ref|XP_006385098.1|2e-29hypothetical protein POPTR_0004s23900g [Populus trichocarpa] gb|ABK94107.1| unkn
JMFN025N21Sequence501010369 (8)ref|XP_011087606.1|2e-29PREDICTED: NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 3-B [Sesam
JMFS100G11Sequence508010369 (8)ref|XP_006385098.1|2e-29hypothetical protein POPTR_0004s23900g [Populus trichocarpa] gb|ABK94107.1| unkn
JMFS169H04Sequence516010369 (8)gb|EYU33224.1|6e-31hypothetical protein MIMGU_mgv1a022036mg, partial [Erythranthe guttata]

Alignment

This contig is upended


. : . : . : . : . : . :
JMFN025G23+ AACATCGAA
JMFS100G11+ CATCGAA
JMFS169H04+ GATGGAAAACATCGAA
JMFN018K12+ GAGATGGAAAACATCGAA
JMFN008B04+ CATCGAA
JMFN013P07+ GAGATGGAAAACATCGAA
JMFN016M21+ GAAAACATCGAA
                      ____________________________________________________________
consensus GAGATGGAAAACATCGAA
 
. : . : . : . : . : . :
JMFN025G23+ ATGGTTGTGTAATAACCATAAACACAAATAACCAATTTAACAAGGCACTATCTGCAAATC
JMFS100G11+ ATGGTTGTGTAATAACCATAAACACAAATAACCAATTTAACAAGGCACTATCTGCAAATC
JMFS169H04+ ATGGTTGTGTAATAACCATAAACGCAAATAACCAATTTAACAAGGCACTATCTGCAAATC
JMFN018K12+ ATGGTTGTGTAATAACCATAAACACAAATAACCAATTTAACAAGGCACTATCTGCAAATC
JMFN008B04+ ATGGTTGTGTAATAACCATAAACACAAATAACCAATTTAACAAGGCACTATCTGCAAATC
JMFN013P07+ ATGGTTGTGTAATAACCATAAACACAAATAACCAATTTAACAAGGCACTATCTGCAAATC
JMFN016M21+ ATGGTTGTGTAATAACCATAAACACAAATAACCAATTTAACAAGGCACTATCTGCAAATC
JMFN025N21+ ACAAGGCACTATCTGCAAATC
                      ____________________________________________________________
consensus ATGGTTGTGTAATAACCATAAACACAAATAACCAATTTAACAAGGCACTATCTGCAAATC
 
. : . : . : . : . : . :
JMFN025G23+ AGCCCAAGGTTTCAAGCTTTCAGCTAACTAAACACAAGTTCATGTTGATGTATCTTATTC
JMFS100G11+ AGCCCAAGGTTTCAAGCTTTCAGCTAACTAAACACAAGTTCATGTTGATGTATCTTATTC
JMFS169H04+ AGCCCAAGGTTTCAAGCTTTCAGCTAACTAAACACAAGTTCATGTTGATGTATATTATTC
JMFN018K12+ AGCCCAAGGTTTCAAGCTTTCAGCTAACTAAACACAAGTTCATGTTGATGTATCTTATTC
JMFN008B04+ AGCCCAAGGTTTCAAGCTTTCAGCTAACTAAACACAAGTTCATGTTGATGTATCTTATTC
JMFN013P07+ AGCCCAAGGTTTCAAGCTTTCAGCTAACTAAACACAAGTTCATGTTGATGTATCTTATTC
JMFN016M21+ AGCCCAAGGTTTCAAGCTTTCAGCTAACTAAACACAAGTTCATGTTGATGTATCTTATTC
JMFN025N21+ AGCCCAAGGTTTCAAGCTTTCAGCTAACTAAACACAAGTTCATGTTGATGTATCTTATTC
                      ____________________________________________________________
consensus AGCCCAAGGTTTCAAGCTTTCAGCTAACTAAACACAAGTTCATGTTGATGTATCTTATTC
 
. : . : . : . : . : . :
JMFN025G23+ ATAAACCATAGATGATCAAAGAAAGAAACATAAAAGACTGGAACACATGATCCTGCTTCT
JMFS100G11+ ATAAACCATAGATGATCAAAGAAAGAAACATAAAAGACTGGAACACATGATCCTGCTTCT
JMFS169H04+ ATAAACCATAGATGATCAAAGAAAGAAACATAAAAGACTGGAACACATGATCCTGCTTCT
JMFN018K12+ ATAAACCATAGATGATCAAAGAAAGAAACATAAAAGACTGGAACACATGATCCTGCTTCT
JMFN008B04+ ATAAACCATAGATGATCAAAGAAAGAAACATAAAAGACTGGAACACATGATCCTGCTTCT
JMFN013P07+ ATAAACCATAGATGATCAAAGAAAGAAACATAAAAGACTGGAACACATGATCCTGCTTCT
JMFN016M21+ ATAAACCATAGATGATCAAAGAAAGAAACATAAAAGACTGGAACACATGATCCTGCTTCT
JMFN025N21+ ATAAACCATAGATGATCAAAGAAAGAAACATAAAAGACTGGAACACATGATCCTGCTTCT
                      ____________________________________________________________
consensus ATAAACCATAGATGATCAAAGAAAGAAACATAAAAGACTGGAACACATGATCCTGCTTCT
 
. : . : . : . : . : . :
JMFN025G23+ GCGCACCACAATGAGTTCATCTTGTGAGTGATGATTGTTTCTCAGTGAGAGTGAGAATCG
JMFS100G11+ GCGCACCACAATGAGTTCATCTTGTGAGTGATGATTGTTTCTCAGTGAGAGTGAGAATCG
JMFS169H04+ GCGCACCACAATGAGTTCATCTTGTGAGTGATGATTGTTTCTCAGTGAGAGTGACAATCG
JMFN018K12+ GCGCACCACAATGAGTTCATCTTGTGAGTGATGATTGTTTCTCAGTGAGAGTGAGAATCG
JMFN008B04+ GCGCACCACAATGAGTTCATCTTGTGAGTGATGATTGTTTCTCAGTGAGAGTGAGAATCG
JMFN013P07+ GCGCACCACAATGAGTTCATCTTGTGAGTGATGATTGTTTCTCAGTGAGAGTGAGAATCG
JMFN016M21+ GCGCACCACAATGAGTTCATCTTGTGAGTGATGATTGTTTCTCAGTGAGAGTGAGAATCG
JMFN025N21+ GCGCACCACAATGAGTTCATCTTGTGAGTGATGATTGTTTCTCAGTGAGAGTGAGAATCG
                      ____________________________________________________________
consensus GCGCACCACAATGAGTTCATCTTGTGAGTGATGATTGTTTCTCAGTGAGAGTGAGAATCG
 
. : . : . : . : . : . :
JMFN025G23+ GAGGTGGTGGAATGAGAGTGAGAATGAGAAGGCGCATAGATCTTGTTGTAGGCGAGTTCG
JMFS100G11+ GAGGTGGTGGAATGAGAGTGAGAATGAGAAGGCGCATAGATCTTGTTGTAGGCGAGTTCG
JMFS169H04+ CAGGTGGTGGAATCAGAGTGAGAATGAGAAGGCGCATAGATCTTGTTGTAGGCGAGTTCG
JMFN018K12+ GAGGTGGTGGAATGAGAGTGAGAATGAGAAGGCGCATAGATCTTGTTGTAGGCGAGTTCG
JMFN008B04+ GAGGTGGTGGAATGAGAGTGAGAATGAGAAGGCGCATAGATCTTGTTGTAGGCGAGTTCG
JMFN013P07+ GAGGTGGTGGAATGAGAGTGAGAATGAGAAGGCGCATAGATCTTGTTGTAGGCGAGTTCG
JMFN016M21+ GAGGTGGTGGAATGAGAGTGAGAATGAGAAGGCGCATAGATCTTGTTGTAGGCGAGTTCG
JMFN025N21+ GAGGTGGTGGAATGAGAGTGAGAATGAGAAGGCGCATAGATCTTGTTGTAGGCGAGTTCG
                      ____________________________________________________________
consensus GAGGTGGTGGAATGAGAGTGAGAATGAGAAGGCGCATAGATCTTGTTGTAGGCGAGTTCG
 
. : . : . : . : . : . :
JMFN025G23+ CCGACGAGGTAGACGCCGAAGGCGACAAGGGCGATGCCGAGTCCCGGAACGGCGTGGCGG
JMFS100G11+ CCGACGAGGTAGACGCCGAAGGCGACAAGGGCGATGCCGAGTCCCGGAACGGCGTGGCGG
JMFS169H04+ CCGACGAGGTAGACGCCGAAGGCGACAAGGGCGATGCCGAGTCCCGGAACGGCGTGACGG
JMFN018K12+ CCGACGAGGTAGACGCCGAAGGCGACAAGGGCGATGCCGAGTCCCGGAACGGCGTGGCGG
JMFN008B04+ CCGACGAGGTAGACGCCGAAGGCGACAAGGGCGATGCCGAGTCCCGGAACGGCGTGGCGG
JMFN013P07+ CCGACGAGGTAGACGCCGAAGGCGACAAGGGCGATGCCGAGTCCCGGAACGGCGTGGCGG
JMFN016M21+ CCGACGAGGTAGACGCCGAAGGCGACAAGGGCGATGCCGAGTCCCGGAACGGCGTGGCGG
JMFN025N21+ CCGACGAGGTAGACGCCGAAGGCGACAAGGGCGATGCCGAGTCCCGGAACGGCGTGGCGG
                      ____________________________________________________________
consensus CCGACGAGGTAGACGCCGAAGGCGACAAGGGCGATGCCGAGTCCCGGAACGGCGTGGCGG
 
. : . : . : . : . : . :
JMFN025G23+ AACTGATTCGACAGCATCGGGTGCTTCCTCCACTCGTCCCTCCTCCTGAAAAACTCCCCC
JMFS100G11+ AACTGATTCGACAGCATCGGGTGCTTCCTCCACTCGTCCCTCCTCCTGAAAAACTCCCCC
JMFS169H04+ AACTGATTCGACAGCATCGGGTGCTTCCTCCACTCGTCCCTCCTCCTGAAAAACTCCCCC
JMFN018K12+ AACTGATTCGACAGCATCGGGTGCTTCCTCCACTCGTCCCTCCTCCTGAAAAACTCCCCC
JMFN008B04+ AACTGATTCGACAGCATCGGGTGCTTCCTCCACTCGTCCCTCCTCCTGAAAAACTCCCCC
JMFN013P07+ AACTGATTCGACAGCATCGGGTGCTTCCTCCACTCGTCCCTCCTCCTGAAAAACTCCCCC
JMFN016M21+ AACTGATTCGACAGCATCGGGTGCTTCCTCCACTCGTCCCTCCTCCTGAAAAACTCCCCC
JMFN025N21+ AACTGATTCGACAGCATCGGGTGCTTCCTCCACTCGTCCCTCCTCCTGAAAAACTCCCCC
                      ____________________________________________________________
consensus AACTGATTCGACAGCATCGGGTGCTTCCTCCACTCGTCCCTCCTCCTGAAAAACTCCCCC
 
. : . : . : . : . : . :
JMFN025G23+ GTCGATCCAAGTGACTTAGCCATCGCCGTCCGGCCGGTGGTGATATTCTCCTCGATCTGA
JMFS100G11+ GTCGATCCAAGTGACTTAGCCATCGCCGTCCGGCCGGTGGTGATATTCTCCTCGATCTGA
JMFS169H04+ GTCGATCCAAGTGACTTAGCCATCGCCGTCCGGCCGGTGGTGATATTCTCCTCGATCTGA
JMFN018K12+ GTCGATCCAAGTGACTTAGCCATCGCCGTCCGGCCGGTGGTGATATTCTCCTCGA
JMFN008B04+ GTCGATCCAAGTGACTTAGCCATCGCCGTCCGGCCGGTGGTGATATTCTCCTCGATCTGA
JMFN013P07+ GTCGATCCAAGTGACTTAGCCATCGCCGTCCGGCCGGTGGTGATATTCTCCTCGATCTGA
JMFN016M21+ GTCGATCCAAGTGACTTAGCCATCGCCGTCCGGCCGGTGGTGATATTCTCCTCGATCTGA
JMFN025N21+ GTCGATCCAAGTGACTTAGCCATCGCCGTCCGGCCGGTGGTGATATTCTCCTCGATCTGA
                      ____________________________________________________________
consensus GTCGATCCAAGTGACTTAGCCATCGCCGTCCGGCCGGTGGTGATATTCTCCTCGATCTGA
 
. : . : . : . : . : . :
JMFN025G23+ TATTCGGTGATGCTTGTTGATGAATGAT
JMFS100G11+ TATTCGGTGATGCTTGTTGAT
JMFS169H04+ TATTCGGTGATGCTTGTTGA
JMFN008B04+ TATTCG
JMFN013P07+ TATTCGGTGATGCTTGTTGATGAATGATGATG
JMFN016M21+ TATTCGGTGATGCTTGTTGATGAATGATGATG
JMFN025N21+ TATTCGGTGATGCTTGTTGATGAATGATGATGGGTGAGGTGAATGATATGCTGAAGCTGA
                      ____________________________________________________________
consensus TATTCGGTGATGCTTGTTGATGAATGATGATGGGTGAGGTGAATGATATGCTGAAGCTGA