| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFN008B04 | Sequence | 493 | 010369 (8) | ref|XP_011087606.1| | 3e-29 | PREDICTED: NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 3-B [Sesam | |||||
| JMFN013P07 | Sequence | 530 | 010369 (8) | ref|XP_011087606.1| | 2e-29 | PREDICTED: NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 3-B [Sesam | |||||
| JMFN016M21 | Sequence | 529 | 010369 (8) | ref|XP_006385098.1| | 2e-29 | hypothetical protein POPTR_0004s23900g [Populus trichocarpa] gb|ABK94107.1| unkn | |||||
| JMFN018K12 | Sequence | 493 | 010369 (8) | ref|XP_011087606.1| | 3e-29 | PREDICTED: NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 3-B [Sesam | |||||
| JMFN025G23 | Sequence | 517 | 010369 (8) | ref|XP_006385098.1| | 2e-29 | hypothetical protein POPTR_0004s23900g [Populus trichocarpa] gb|ABK94107.1| unkn | |||||
| JMFN025N21 | Sequence | 501 | 010369 (8) | ref|XP_011087606.1| | 2e-29 | PREDICTED: NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 3-B [Sesam | |||||
| JMFS100G11 | Sequence | 508 | 010369 (8) | ref|XP_006385098.1| | 2e-29 | hypothetical protein POPTR_0004s23900g [Populus trichocarpa] gb|ABK94107.1| unkn | |||||
| JMFS169H04 | Sequence | 516 | 010369 (8) | gb|EYU33224.1| | 6e-31 | hypothetical protein MIMGU_mgv1a022036mg, partial [Erythranthe guttata] | |||||
This contig is upended
. : . : . : . : . : . :
JMFN025G23+ AACATCGAA
JMFS100G11+ CATCGAA
JMFS169H04+ GATGGAAAACATCGAA
JMFN018K12+ GAGATGGAAAACATCGAA
JMFN008B04+ CATCGAA
JMFN013P07+ GAGATGGAAAACATCGAA
JMFN016M21+ GAAAACATCGAA
____________________________________________________________
consensus GAGATGGAAAACATCGAA
. : . : . : . : . : . :
JMFN025G23+ ATGGTTGTGTAATAACCATAAACACAAATAACCAATTTAACAAGGCACTATCTGCAAATC
JMFS100G11+ ATGGTTGTGTAATAACCATAAACACAAATAACCAATTTAACAAGGCACTATCTGCAAATC
JMFS169H04+ ATGGTTGTGTAATAACCATAAACGCAAATAACCAATTTAACAAGGCACTATCTGCAAATC
JMFN018K12+ ATGGTTGTGTAATAACCATAAACACAAATAACCAATTTAACAAGGCACTATCTGCAAATC
JMFN008B04+ ATGGTTGTGTAATAACCATAAACACAAATAACCAATTTAACAAGGCACTATCTGCAAATC
JMFN013P07+ ATGGTTGTGTAATAACCATAAACACAAATAACCAATTTAACAAGGCACTATCTGCAAATC
JMFN016M21+ ATGGTTGTGTAATAACCATAAACACAAATAACCAATTTAACAAGGCACTATCTGCAAATC
JMFN025N21+ ACAAGGCACTATCTGCAAATC
____________________________________________________________
consensus ATGGTTGTGTAATAACCATAAACACAAATAACCAATTTAACAAGGCACTATCTGCAAATC
. : . : . : . : . : . :
JMFN025G23+ AGCCCAAGGTTTCAAGCTTTCAGCTAACTAAACACAAGTTCATGTTGATGTATCTTATTC
JMFS100G11+ AGCCCAAGGTTTCAAGCTTTCAGCTAACTAAACACAAGTTCATGTTGATGTATCTTATTC
JMFS169H04+ AGCCCAAGGTTTCAAGCTTTCAGCTAACTAAACACAAGTTCATGTTGATGTATATTATTC
JMFN018K12+ AGCCCAAGGTTTCAAGCTTTCAGCTAACTAAACACAAGTTCATGTTGATGTATCTTATTC
JMFN008B04+ AGCCCAAGGTTTCAAGCTTTCAGCTAACTAAACACAAGTTCATGTTGATGTATCTTATTC
JMFN013P07+ AGCCCAAGGTTTCAAGCTTTCAGCTAACTAAACACAAGTTCATGTTGATGTATCTTATTC
JMFN016M21+ AGCCCAAGGTTTCAAGCTTTCAGCTAACTAAACACAAGTTCATGTTGATGTATCTTATTC
JMFN025N21+ AGCCCAAGGTTTCAAGCTTTCAGCTAACTAAACACAAGTTCATGTTGATGTATCTTATTC
____________________________________________________________
consensus AGCCCAAGGTTTCAAGCTTTCAGCTAACTAAACACAAGTTCATGTTGATGTATCTTATTC
. : . : . : . : . : . :
JMFN025G23+ ATAAACCATAGATGATCAAAGAAAGAAACATAAAAGACTGGAACACATGATCCTGCTTCT
JMFS100G11+ ATAAACCATAGATGATCAAAGAAAGAAACATAAAAGACTGGAACACATGATCCTGCTTCT
JMFS169H04+ ATAAACCATAGATGATCAAAGAAAGAAACATAAAAGACTGGAACACATGATCCTGCTTCT
JMFN018K12+ ATAAACCATAGATGATCAAAGAAAGAAACATAAAAGACTGGAACACATGATCCTGCTTCT
JMFN008B04+ ATAAACCATAGATGATCAAAGAAAGAAACATAAAAGACTGGAACACATGATCCTGCTTCT
JMFN013P07+ ATAAACCATAGATGATCAAAGAAAGAAACATAAAAGACTGGAACACATGATCCTGCTTCT
JMFN016M21+ ATAAACCATAGATGATCAAAGAAAGAAACATAAAAGACTGGAACACATGATCCTGCTTCT
JMFN025N21+ ATAAACCATAGATGATCAAAGAAAGAAACATAAAAGACTGGAACACATGATCCTGCTTCT
____________________________________________________________
consensus ATAAACCATAGATGATCAAAGAAAGAAACATAAAAGACTGGAACACATGATCCTGCTTCT
. : . : . : . : . : . :
JMFN025G23+ GCGCACCACAATGAGTTCATCTTGTGAGTGATGATTGTTTCTCAGTGAGAGTGAGAATCG
JMFS100G11+ GCGCACCACAATGAGTTCATCTTGTGAGTGATGATTGTTTCTCAGTGAGAGTGAGAATCG
JMFS169H04+ GCGCACCACAATGAGTTCATCTTGTGAGTGATGATTGTTTCTCAGTGAGAGTGACAATCG
JMFN018K12+ GCGCACCACAATGAGTTCATCTTGTGAGTGATGATTGTTTCTCAGTGAGAGTGAGAATCG
JMFN008B04+ GCGCACCACAATGAGTTCATCTTGTGAGTGATGATTGTTTCTCAGTGAGAGTGAGAATCG
JMFN013P07+ GCGCACCACAATGAGTTCATCTTGTGAGTGATGATTGTTTCTCAGTGAGAGTGAGAATCG
JMFN016M21+ GCGCACCACAATGAGTTCATCTTGTGAGTGATGATTGTTTCTCAGTGAGAGTGAGAATCG
JMFN025N21+ GCGCACCACAATGAGTTCATCTTGTGAGTGATGATTGTTTCTCAGTGAGAGTGAGAATCG
____________________________________________________________
consensus GCGCACCACAATGAGTTCATCTTGTGAGTGATGATTGTTTCTCAGTGAGAGTGAGAATCG
. : . : . : . : . : . :
JMFN025G23+ GAGGTGGTGGAATGAGAGTGAGAATGAGAAGGCGCATAGATCTTGTTGTAGGCGAGTTCG
JMFS100G11+ GAGGTGGTGGAATGAGAGTGAGAATGAGAAGGCGCATAGATCTTGTTGTAGGCGAGTTCG
JMFS169H04+ CAGGTGGTGGAATCAGAGTGAGAATGAGAAGGCGCATAGATCTTGTTGTAGGCGAGTTCG
JMFN018K12+ GAGGTGGTGGAATGAGAGTGAGAATGAGAAGGCGCATAGATCTTGTTGTAGGCGAGTTCG
JMFN008B04+ GAGGTGGTGGAATGAGAGTGAGAATGAGAAGGCGCATAGATCTTGTTGTAGGCGAGTTCG
JMFN013P07+ GAGGTGGTGGAATGAGAGTGAGAATGAGAAGGCGCATAGATCTTGTTGTAGGCGAGTTCG
JMFN016M21+ GAGGTGGTGGAATGAGAGTGAGAATGAGAAGGCGCATAGATCTTGTTGTAGGCGAGTTCG
JMFN025N21+ GAGGTGGTGGAATGAGAGTGAGAATGAGAAGGCGCATAGATCTTGTTGTAGGCGAGTTCG
____________________________________________________________
consensus GAGGTGGTGGAATGAGAGTGAGAATGAGAAGGCGCATAGATCTTGTTGTAGGCGAGTTCG
. : . : . : . : . : . :
JMFN025G23+ CCGACGAGGTAGACGCCGAAGGCGACAAGGGCGATGCCGAGTCCCGGAACGGCGTGGCGG
JMFS100G11+ CCGACGAGGTAGACGCCGAAGGCGACAAGGGCGATGCCGAGTCCCGGAACGGCGTGGCGG
JMFS169H04+ CCGACGAGGTAGACGCCGAAGGCGACAAGGGCGATGCCGAGTCCCGGAACGGCGTGACGG
JMFN018K12+ CCGACGAGGTAGACGCCGAAGGCGACAAGGGCGATGCCGAGTCCCGGAACGGCGTGGCGG
JMFN008B04+ CCGACGAGGTAGACGCCGAAGGCGACAAGGGCGATGCCGAGTCCCGGAACGGCGTGGCGG
JMFN013P07+ CCGACGAGGTAGACGCCGAAGGCGACAAGGGCGATGCCGAGTCCCGGAACGGCGTGGCGG
JMFN016M21+ CCGACGAGGTAGACGCCGAAGGCGACAAGGGCGATGCCGAGTCCCGGAACGGCGTGGCGG
JMFN025N21+ CCGACGAGGTAGACGCCGAAGGCGACAAGGGCGATGCCGAGTCCCGGAACGGCGTGGCGG
____________________________________________________________
consensus CCGACGAGGTAGACGCCGAAGGCGACAAGGGCGATGCCGAGTCCCGGAACGGCGTGGCGG
. : . : . : . : . : . :
JMFN025G23+ AACTGATTCGACAGCATCGGGTGCTTCCTCCACTCGTCCCTCCTCCTGAAAAACTCCCCC
JMFS100G11+ AACTGATTCGACAGCATCGGGTGCTTCCTCCACTCGTCCCTCCTCCTGAAAAACTCCCCC
JMFS169H04+ AACTGATTCGACAGCATCGGGTGCTTCCTCCACTCGTCCCTCCTCCTGAAAAACTCCCCC
JMFN018K12+ AACTGATTCGACAGCATCGGGTGCTTCCTCCACTCGTCCCTCCTCCTGAAAAACTCCCCC
JMFN008B04+ AACTGATTCGACAGCATCGGGTGCTTCCTCCACTCGTCCCTCCTCCTGAAAAACTCCCCC
JMFN013P07+ AACTGATTCGACAGCATCGGGTGCTTCCTCCACTCGTCCCTCCTCCTGAAAAACTCCCCC
JMFN016M21+ AACTGATTCGACAGCATCGGGTGCTTCCTCCACTCGTCCCTCCTCCTGAAAAACTCCCCC
JMFN025N21+ AACTGATTCGACAGCATCGGGTGCTTCCTCCACTCGTCCCTCCTCCTGAAAAACTCCCCC
____________________________________________________________
consensus AACTGATTCGACAGCATCGGGTGCTTCCTCCACTCGTCCCTCCTCCTGAAAAACTCCCCC
. : . : . : . : . : . :
JMFN025G23+ GTCGATCCAAGTGACTTAGCCATCGCCGTCCGGCCGGTGGTGATATTCTCCTCGATCTGA
JMFS100G11+ GTCGATCCAAGTGACTTAGCCATCGCCGTCCGGCCGGTGGTGATATTCTCCTCGATCTGA
JMFS169H04+ GTCGATCCAAGTGACTTAGCCATCGCCGTCCGGCCGGTGGTGATATTCTCCTCGATCTGA
JMFN018K12+ GTCGATCCAAGTGACTTAGCCATCGCCGTCCGGCCGGTGGTGATATTCTCCTCGA
JMFN008B04+ GTCGATCCAAGTGACTTAGCCATCGCCGTCCGGCCGGTGGTGATATTCTCCTCGATCTGA
JMFN013P07+ GTCGATCCAAGTGACTTAGCCATCGCCGTCCGGCCGGTGGTGATATTCTCCTCGATCTGA
JMFN016M21+ GTCGATCCAAGTGACTTAGCCATCGCCGTCCGGCCGGTGGTGATATTCTCCTCGATCTGA
JMFN025N21+ GTCGATCCAAGTGACTTAGCCATCGCCGTCCGGCCGGTGGTGATATTCTCCTCGATCTGA
____________________________________________________________
consensus GTCGATCCAAGTGACTTAGCCATCGCCGTCCGGCCGGTGGTGATATTCTCCTCGATCTGA
. : . : . : . : . : . :
JMFN025G23+ TATTCGGTGATGCTTGTTGATGAATGAT
JMFS100G11+ TATTCGGTGATGCTTGTTGAT
JMFS169H04+ TATTCGGTGATGCTTGTTGA
JMFN008B04+ TATTCG
JMFN013P07+ TATTCGGTGATGCTTGTTGATGAATGATGATG
JMFN016M21+ TATTCGGTGATGCTTGTTGATGAATGATGATG
JMFN025N21+ TATTCGGTGATGCTTGTTGATGAATGATGATGGGTGAGGTGAATGATATGCTGAAGCTGA
____________________________________________________________
consensus TATTCGGTGATGCTTGTTGATGAATGATGATGGGTGAGGTGAATGATATGCTGAAGCTGA