Contig 010357:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMSF004N02-                                                                     G
                      ____________________________________________________________
consensus                                                                        G
 
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rJMSF004N02-          AGTACAGATTAAATTAGGTTCTCTATGAAATGAATGCCCACNCACTGCTCACAAAATGGG
rJMSF004P04-            TACAGATTAAATTAGGTTCTCTATGAAATGAATGCCCACTCACTGATCACAAAATGGG
                      ____________________________________________________________
consensus             AGTACAGATTAAATTAGGTTCTCTATGAAATGAATGCCCACTCACTGCTCACAAAATGGG
 
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rJMSF004N02-          ACATATAGTCATAACAATCTGTCACAAAATAAANGCAATGATTGNGTCTNNAAAAGGATG
rJMSF004P04-          ACATATA-TCATAACAATCTGTCACAAAATAAAAGCAATGATTCAGTCTACAAAAGGATG
                      ____________________________________________________________
consensus             ACATATAGTCATAACAATCTGTCACAAAATAAAAGCAATGATTGAGTCTACAAAAGGATG
 
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rJMSF004N02-          GTCAAATTCCNAAGCTAAGACACAGAAGACAAAATGAACATCAATNATNNAGNACCNTTT
rJMSF004P04-          GTCAAATTCCTAAGCTAAGACACAAAAGACAAAATGAACATCAATCATCTAGCACCATTT
JMFN009I24+                                             TGAACATCAATCATCTAGCACCATTT
                      ____________________________________________________________
consensus             GTCAAATTCCTAAGCTAAGACACAGAAGACAAAATGAACATCAATCATCTAGCACCATTT
 
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rJMSF004N02-          CAGTTTCNCTNCTTAGCGGGTGGTTGATCCTCANCTTCCNCGTCNTCCTCCTCTTCTTCT
rJMSF004P04-          CACTTTCTCTTCTTAGCGGGTGGTTGATCCTCATCTTCCTCGTCTTCCTCCTCTTCTTCT
JMFN009I24+           CACTTTCTCTTCTTAGCGGGTGGTTGATCCTCATCTTCCTCGTCTTCCTCCTCTTCTTCT
                      ____________________________________________________________
consensus             CACTTTCTCTTCTTAGCGGGTGGTTGATCCTCATCTTCCTCGTCTTCCTCCTCTTCTTCT
 
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rJMSF004N02-          TCTTCGTCATCAGCANCGTCATCATCATCAGNCTCCATCGTCATCNTCCGCATCATGATC
rJMSF004P04-          TCTTCGTCATCATCACCGTCATCATCATCA-TCTCCATCGTCATCATCCCCATCATCATC
JMFN009I24+           TCTTCGTCATCATCACCGTCATCATCATCA-TCTCCATCGTCATCATCCCCATCATCATC
                      ____________________________________________________________
consensus             TCTTCGTCATCATCACCGTCATCATCATCA-TCTCCATCGTCATCATCCCCATCATCATC
 
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rJMSF004N02-          TTCGNCATCACTGCCTCCTTCATTACCATTA                             
rJMSF004P04-          TTCGTCATCACTGCCTCCTTCATTACCATTAGCCTCGGGAGTTTCCTCGGGATCCCCATC
JMFN009I24+           TTCGTCATCACTGCCTCCTTCATTACCATTAGCCTCGGGAGTTTCCTCGGGATCCCCATC
                      ____________________________________________________________
consensus             TTCGTCATCACTGCCTCCTTCATTACCATTAGCCTCGGGAGTTTCCTCGGGATCCCCATC
 
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rJMSF004P04-          ATCGTCATCATCTCCCCCTTCATCGCCCGAGAAG                          
JMFN009I24+           ATCGTCATCATCTCCCCCTTCATCGCCCGAGAAGTCTTCATCACCAGCATCATCGTCATC
                      ____________________________________________________________
consensus             ATCGTCATCATCTCCCCCTTCATCGCCCGAGAAGTCTTCATCACCAGCATCATCGTCATC
 
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JMFN009I24+           ATCATCTGCCTCACCATCATCGCCTTCTTCATCATCATCCTCTGTATCACTACCATCCTT
                      ____________________________________________________________
consensus             ATCATCTGCCTCACCATCATCGCCTTCTTCATCATCATCCTCTGTATCACTACCATCCTT
 
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JMSF004P04+                    CTCAGCCTTGTTCTTTCTGTGAAGTTCAGCAAATGGAAACCTTTCGTCGGT
JMFN009I24+           ATTTTCAACCTCAGCCTTGTTCTTTCTGTGAAGTTCAGCAAATGGAAACCTTTCGTCGGT
                      ____________________________________________________________
consensus             ATTTTCAACCTCAGCCTTGTTCTTTCTGTGAAGTTCAGCAAATGGAAACCTTTCGTCGGT
 
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JMSF004P04+           CCATCTCAATTCTGGTAAACCATCATTACTCTTCAACAGACATTCCATCATCATAAGCAG
JMFN009I24+           CCATCTCAATTCTGGTAAACCATCATTACTCTTCAACAGACATTCCATCATCATAAGCAG
                      ____________________________________________________________
consensus             CCATCTCAATTCTGGTAAACCATCATTACTCTTCAACAGACATTCCATCATCATAAGCAG
 
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JMSF004P04+           ACAGGAAGCAGATCTCACGGTAGCCGAAAGAGCCTCAGCTACCATAGCTTCCAAAACAGA
JMFN009I24+           ACAGGAAGCAGATCTCACGGTAGCCGAAAGAGCCTCAGCTACCATAGCTTCCAAAACAGA
                      ____________________________________________________________
consensus             ACAGGAAGCAGATCTCACGGTAGCCGAAAGAGCCTCAGCTACCATAGCTTCCAAAACAGA
 
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JMSF004P04+           GCTCACCACAATTTCCCGTAGAGCAAAAGCCACTTCAGACCCGAAACCACTGGCATCCAT
JMFN009I24+           GCTCACCACAATTTCCCGTAGAGCAAAAGCCACTTCAGACCCGAAACCACTGGCATCCAT
                      ____________________________________________________________
consensus             GCTCACCACAATTTCCCGTAGAGCAAAAGCCACTTCAGACCCGAAACCACTGGCATCCAT
 
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JMSF004P04+           TCTCAAAATCCAAAGCCC                                          
JMFN009I24+           TCTCAAAATCCAAAGCCCAGAAATATCTGCAAAAACTACAACAACGGGGAAAGGAGACAG
                      ____________________________________________________________
consensus             TCTCAAAATCCAAAGCCCAGAAATATCTGCAAAAACTACAACAACGGGGAAAGGAGACAG