| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF031F17 | Sequence | 557 | 010356 (3) | ref|XP_002523859.1| | 3e-62 | short chain alcohol dehydrogenase, putative [Ricinus communis] gb|EEF38585.1| sh | 750 | 010356 (3) | ref|XP_002523859.1| | 3e-20 | short chain alcohol dehydrogenase, putative [Ricinus communis] gb|EEF38585.1| sh |
| JMFN009F15 | Sequence | 633 | 010356 (3) | ref|XP_011022234.1| | 9e-69 | PREDICTED: secoisolariciresinol dehydrogenase-like [Populus euphratica] | |||||
This contig is upended
. : . : . : . : . : . :
rJMFF031F17- TTGAGAGTAAATAAAAGTGGGGTTAAGCTC
____________________________________________________________
consensus TTGAGAGTAAATAAAAGTGGGGTTAAGCTC
. : . : . : . : . : . :
rJMFF031F17- TTTAAGTCTCAATACACACTAGTCTCAGTCCACAACCATCTAAGAAAAAGACATGCCTAC
____________________________________________________________
consensus TTTAAGTCTCAATACACACTAGTCTCAGTCCACAACCATCTAAGAAAAAGACATGCCTAC
. : . : . : . : . : . :
rJMFF031F17- AACAGATGAAGTGGGGGGGTTTTCATGGCGAAGGGGAGGCAGAATCGGACATAACAGATC
____________________________________________________________
consensus AACAGATGAAGTGGGGGGGTTTTCATGGCGAAGGGGAGGCAGAATCGGACATAACAGATC
. : . : . : . : . : . :
rJMFF031F17- TGGAATGAGATCTTGAAGATGGACTTGCACTCCTAGAATGGCTTCTAGAAGAGCAACTAT
____________________________________________________________
consensus TGGAATGAGATCTTGAAGATGGACTTGCACTCCTAGAATGGCTTCTAGAAGAGCAACTAT
. : . : . : . : . : . :
rJMFF031F17- CATAACCACTTCTCCTAGAACTCTTCCTGGGACTCGGAGAAATGCTGCGATAGGAGCCTC
____________________________________________________________
consensus CATAACCACTTCTCCTAGAACTCTTCCTGGGACTCGGAGAAATGCTGCGATAGGAGCCTC
. : . : . : . : . : . :
rJMFF031F17- TCAAGTCCTTTGATGGGGGGAGACGCTTCTCGAGTAGCTTCTTCTGCGGCGCCTTGGAGA
____________________________________________________________
consensus TCAAGTCCTTTGATGGGGGGAGACGCTTCTCGAGTAGCTTCTTCTGCGGCGCCTTGGAGA
. : . : . : . : . : . :
rJMFF031F17- TACGCTGGGTGAGTAACTTCTCCTGTACCTTCGATACCTGGGTGGTGAGATACTCCGGGA
____________________________________________________________
consensus TACGCTGGGTGAGTAACTTCTCCTGTACCTTCGATACCTGGGTGGTGAGATACTCCGGGA
. : . : . : . : . : . :
rJMFF031F17- GATTGAGCGATACCGTTGGCTTCTTCGGTAATAATAATCTCTATCATCAGGGGAGCGGTA
____________________________________________________________
consensus GATTGAGCGATACCGTTGGCTTCTTCGGTAATAATAATCTCTATCATCAGGGGAGCGGTA
. : . : . : . : . : . :
rJMFF031F17- ACTGCTCCTCCTATAGTAGTAGCCATCATCAGGAGAACGGTACCTAGAGTAGTAAGGAGA
____________________________________________________________
consensus ACTGCTCCTCCTATAGTAGTAGCCATCATCAGGAGAACGGTACCTAGAGTAGTAAGGAGA
. : . : . : . : . : . :
rJMFF031F17- GTTGGATGGGGAGTACACCTTCTCCAATTCCTCCTCACCGGAGAAGTTATAGAAACCACA
____________________________________________________________
consensus GTTGGATGGGGAGTACACCTTCTCCAATTCCTCCTCACCGGAGAAGTTATAGAAACCACA
. : . : . : . : . : . :
rJMFF031F17- GGCCAACGGCGTCGCCACCAGGTGCGGCGACACGCAGTTGACTCGAATCCCGTACCGCCC
JMFF031F17+ CGTCGCCACCAGGTGCGGCGACACGCAGTTGACTCGAATCCCGTACCGCCC
JMFN009F15+ CGACACGCAGTTGACTCGAATCCCGTACCGCCC
____________________________________________________________
consensus GGCCAACGGCGTCGCCACCAGGTGCGGCGACACGCAGTTGACTCGAATCCCGTACCGCCC
. : . : . : . : . : . :
rJMFF031F17- AAGGTCCACCGCCGTGCTCCTCGTCAGCCCCACCACTGCGTGCTTCGAGCTCGTGTACGC
JMFF031F17+ AAGGTCCACCGCCGTGCTCCTCGTCAGCCCCACCACTGCGTGCTTCGAGCTCGTGTACGC
JMFN009F15+ AAGGTCCACCGCCGTGCTCCTCGTCAGCCCCACCACTGCGTGCTTCGAGCTCGTGTACGC
____________________________________________________________
consensus AAGGTCCACCGCCGTGCTCCTCGTCAGCCCCACCACTGCGTGCTTCGAGCTCGTGTACGC
. : . : . : . : . : . :
rJMFF031F17- GTGCG
JMFF031F17+ GTGCGTGGTGGCGCCGGCGATTACGGATGCCCCACTCGCCGTCGTGATTATGCATCCACG
JMFN009F15+ GTGCGTGGTGGCGCCGGCGATTACGGATGCCCCACTCGCCGTCGTGATTATGCATCCACG
____________________________________________________________
consensus GTGCGTGGTGGCGCCGGCGATTACGGATGCCCCACTCGCCGTCGTGATTATGCATCCACG
. : . : . : . : . : . :
JMFF031F17+ CCGGTTCGGGTCTTCGGGATCATCACTCGAGCGGCGTGTTTGGTTCCTAGGAATGCGCCC
JMFN009F15+ CCGGTTCGGGTCTTCGGGATCATCACTCGAGCGGCGTGTTTGGTTCCTAGGAATGCGCCC
____________________________________________________________
consensus CCGGTTCGGGTCTTCGGGATCATCACTCGAGCGGCGTGTTTGGTTCCTAGGAATGCGCCC
. : . : . : . : . : . :
JMFF031F17+ ACGAGGTTTGTTCTCACGACCTGCTCGAACTCGGAATTGTCGCTGTCGAGGATGCTG
JMFN009F15+ ACGAGGTTTGTTCTCACGACCTGCTCGAACTCGGAATTGTCGCTGTCGAGGATGCTGGGC
____________________________________________________________
consensus ACGAGGTTTGTTCTCACGACCTGCTCGAACTCGGAATTGTCGCTGTCGAGGATGCTGGGC
. : . : . : . : . : . :
JMFN009F15+ TTGTTCAATCCTCCGATGCCGGCGTTATTGTACATCACGTCGAGCTTGCCGAACTTTGAG
____________________________________________________________
consensus TTGTTCAATCCTCCGATGCCGGCGTTATTGTACATCACGTCGAGCTTGCCGAACTTTGAG
. : . : . : . : . : . :
JMFN009F15+ ACGGCAGTGTTGACGGCGTTTTCGACGTCAGCTTCCTTCGTCACGTCGCAGTGGACAAAG
____________________________________________________________
consensus ACGGCAGTGTTGACGGCGTTTTCGACGTCAGCTTCCTTCGTCACGTCGCAGTGGACAAAG
. : . : . : . : . : . :
JMFN009F15+ GCGGCTGAACCGGACTCCAATTCGCCGCAAACTTTCCGTCTTAAATCGTCCTGAACGTCC
____________________________________________________________
consensus GCGGCTGAACCGGACTCCAATTCGCCGCAAACTTTCCGTCTTAAATCGTCCTGAACGTCC
. : . : . : . : . : . :
JMFN009F15+ GCTATCACCACCTTAGCTCCGTGCCGGGAAAACAGTTTTGTCGTAGCTTTTCCGATGCCG
____________________________________________________________
consensus GCTATCACCACCTTAGCTCCGTGCCGGGAAAACAGTTTTGTCGTAGCTTTTCCGATGCCG
. : . : . : . : . : . :
JMFN009F15+ CTGGCGGCGCCGGTGATCAGCGCCACCTTACCTTCTAGCCTTCTTACAAAGGTTGATGCC
____________________________________________________________
consensus CTGGCGGCGCCGGTGATCAGCGCCACCTTACCTTCTAGCCTTCTTACAAAGGTTGATGCC
. : . : . : . : . : . :
JMFN009F15+ ATTGAGATCTTCCAAGGAATATAATGAACTGTGAAGAGAATTATTGTTGAGAACTTATGA
____________________________________________________________
consensus ATTGAGATCTTCCAAGGAATATAATGAACTGTGAAGAGAATTATTGTTGAGAACTTATGA