Contig 010355:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFN006A01Sequence511010355 (4)ref|XP_002527254.1|6e-26lipid binding protein, putative [Ricinus communis] gb|EEF35098.1| lipid binding
JMFN008N03Sequence496010355 (4)ref|XP_002527254.1|5e-26lipid binding protein, putative [Ricinus communis] gb|EEF35098.1| lipid binding
JMFN037B09Sequence540010355 (4)ref|XP_002527254.1|8e-26lipid binding protein, putative [Ricinus communis] gb|EEF35098.1| lipid binding
JMFN039O08Sequence468010355 (4)ref|XP_002527254.1|1e-21lipid binding protein, putative [Ricinus communis] gb|EEF35098.1| lipid binding

Alignment

This contig is upended


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JMFN037B09+                                                                     GA
                      ____________________________________________________________
consensus                                                                       GA
 
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JMFN006A01+                                  ATATCACAAGACATCACTCATACAACTTAACTGGTAA
JMFN037B09+           ACCAAACATAACATTCATAATATATATCACAAGACATCACTCATACAACTTAACTGGTAA
JMFN008N03+                                                       ACAACTTAACTGGTAA
                      ____________________________________________________________
consensus             ACCAAACATAACATTCATAATATATATCACAAGACATCACTCATACAACTTAACTGGTAA
 
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JMFN006A01+           TTACTTAAAACAAGCACAGAGGATTTGGGTTAATGCCATAGAACATAATGAGGTGTTAAT
JMFN039O08+                 AAAACAAGCACAGAGGATTTGGGTTAATGCCATAGAACATAATGAGGTGTTAAT
JMFN037B09+           TTACTTAAAACAAGCACAGAGGATTTGGGTTAATGCCATAGAACATAATGAGGTGTTAAT
JMFN008N03+           TTACTTAAAACAAGCACAGAGGATTTGGGTTAATGCCATAGAACATAATGAGGTGTTAAT
                      ____________________________________________________________
consensus             TTACTTAAAACAAGCACAGAGGATTTGGGTTAATGCCATAGAACATAATGAGGTGTTAAT
 
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JMFN006A01+           TCACACAATTAAGATAATATAATTGCAGTGCAAAAAGTATAAGATGAGACCCTAACAATT
JMFN039O08+           TCAGACAATTAAGATAATATAATTGCAGTGCAAAAAGTATAAGATGAGACCCTAACAATT
JMFN037B09+           TCACACAATTAAGATAATATAATTGCAGTGCAAAAAGTATAAGATGAGACCCTAACAATT
JMFN008N03+           TCACACAATTAAGATAATATAATTGCAGTGCAAAAAGTATAAGATGAGACCCTAACAATT
                      ____________________________________________________________
consensus             TCACACAATTAAGATAATATAATTGCAGTGCAAAAAGTATAAGATGAGACCCTAACAATT
 
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JMFN006A01+           GGCAGGAGGGGTGAGATTACACTTCTTTGGAAGAGCCATGGCAAGGTCAGGATCAATCCC
JMFN039O08+           GGCAGGAGGG--GGGATTACACTTCTTTGGAAGAGCCATGGCAAGGTCAGGATCAATCCC
JMFN037B09+           GGCAGGAGGGGTGAGATTACACTTCTTTGGAAGAGCCATGGCAAGGTCAGGATCAATCCC
JMFN008N03+           GGCAGGAGGGGTGAGATTACACTTCTTTGGAAGAGCCATGGCAAGGTCAGGATCAATCCC
                      ____________________________________________________________
consensus             GGCAGGAGGGGTGAGATTACACTTCTTTGGAAGAGCCATGGCAAGGTCAGGATCAATCCC
 
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JMFN006A01+           AAGGAAGGACAGCATGGGGGAGCCCTTCTGCGAGCACAAGCACGGCAGGTCAGCCGTGGA
JMFN039O08+           AAGGAAGGACAGCATGGGGGAGCCCTTCTGCGAGCACAAGCACGGCAGGTCAGCCGTGGA
JMFN037B09+           AAGGAAGGACAGCATGGGGGAGCCCTTCTGCGAGCACAAGCACGGCAGGTCAGCCGTGGA
JMFN008N03+           AAGGAAGGACAGCATGGGGGAGCCCTTCTGCGAGCACAAGCACGGCAGGTCAGCCGTGGA
                      ____________________________________________________________
consensus             AAGGAAGGACAGCATGGGGGAGCCCTTCTGCGAGCACAAGCACGGCAGGTCAGCCGTGGA
 
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JMFN006A01+           GAGGGCGGTGCAGCAGGCGGCCGACGGCGGGTCCACCGGGTCCGGCAGCGTCACAGATGG
JMFN039O08+           GAGGGCGGTGCAGCAGGCGGCCGACGGCGGGTCCACCGGGTCCGGCAGCGTCACAGATGG
JMFN037B09+           GAGGGCGGTGCAGCAGGCGGCCGACGGCGGGTCCACCGGGTCCGGCAGCGTCACAGATGG
JMFN008N03+           GAGGGCGGTGCAGCAGGCGGCCGACGGCGGGTCCACCGGGTCCGGCAGCGTCACAGATGG
                      ____________________________________________________________
consensus             GAGGGCGGTGCAGCAGGCGGCCGACGGCGGGTCCACCGGGTCCGGCAGCGTCACAGATGG
 
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JMFN006A01+           CTTGCATGCCTGCAGCCCATCATCAGTCATGTTGCACAGAGTGTAGCAATCTCCATGGAA
JMFN039O08+           CTTGCATGCCTGCAGCCCATCATCAGTCATGTTGCACAGAGTGTAGCAATCTCCATGGAA
JMFN037B09+           CTTGCATGCCTGCAGCCCATCATCAGTCATGTTGCACAGAGTGTAGCAATCTCCATGGAA
JMFN008N03+           CTTGCATGCCTGCAGCCCATCATCAGTCATGTTGCACAGAGTGTAGCAATCTCCATGGAA
                      ____________________________________________________________
consensus             CTTGCATGCCTGCAGCCCATCATCAGTCATGTTGCACAGAGTGTAGCAATCTCCATGGAA
 
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JMFN006A01+           AATGTTGGCTGCAAGGATGATGGACATTATCATGAGAATAGCCATGGGTGTTTTGTTTCC
JMFN039O08+           AATGTTGGCTGCAAGGATGATGGACATTATCATGAGAATAGCCATGGGTGTTTTGTTTCC
JMFN037B09+           AATGTTGGCTGCAAGGATGATGGACATTATCATGAGAATAGCCATGGGTGTTTTGTTTCC
JMFN008N03+           AATGTTGGCTGCAAGGATGATGGACATTATCATGAGAATAGCCATGGGTGTTTTGTTTCC
                      ____________________________________________________________
consensus             AATGTTGGCTGCAAGGATGATGGACATTATCATGAGAATAGCCATGGGTGTTTTGTTTCC
 
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JMFN006A01+           GATGAAGACATTATTATTATTCTCCATTTTTGGCAGTTCGTAGTGCTAATTAAG      
JMFN039O08+           GATGAAGACATTATTATTATTCTCCATTTTTGGCAGTTCGTAGTGCTAATTAAG      
JMFN037B09+           GATGAAGACATTATTATTATTCTCCATTTTTGGCAGTTCGTAGTGCTAATTAAG      
JMFN008N03+           GATGAAGACATTATTATTATTCTCCATTTTTGGCAGTTCGTAGTGCTAATTAAGGTTGTC
                      ____________________________________________________________
consensus             GATGAAGACATTATTATTATTCTCCATTTTTGGCAGTTCGTAGTGCTAATTAAGGTTGTC