Contig 010353:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFN007D12Sequence566010353 (4)ref|XP_004233473.1|87.8PREDICTED: uncharacterized protein LOC101251647 [Solanum lycopersicum]
JMFN013C11Sequence475010353 (4)ref|XP_004233473.1|87.8PREDICTED: uncharacterized protein LOC101251647 [Solanum lycopersicum]
JMSF007N04Sequence336010353 (4)ref|XP_004233473.1|80.5PREDICTED: uncharacterized protein LOC101251647 [Solanum lycopersicum]502010353 (4)ref|XP_004233473.1|87.8PREDICTED: uncharacterized protein LOC101251647 [Solanum lycopersicum]

Alignment

This contig is upended


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JMFN007D12+                                            CAATAAGCTTTGAAATTGAGCAATAAT
                      ____________________________________________________________
consensus                                              CAATAAGCTTTGAAATTGAGCAATAAT
 
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JMFN013C11+                                      GTATATATGTGCTTTAATTGAGGAATAGATCTT
rJMSF007N04-                                     GTATATATGTGCTTTAATTGAGGAATAGATCTT
JMFN007D12+           GAAGCAATTCAATTGACATTGCAGTATGTATATATGTGCTTTAATTGAGGAATAGATCTT
                      ____________________________________________________________
consensus             GAAGCAATTCAATTGACATTGCAGTATGTATATATGTGCTTTAATTGAGGAATAGATCTT
 
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JMFN013C11+           GGCCGGAGGTTTTCAAAGTAACGAGACACAAAAACAGACACTACTAATCTTTATTATACT
rJMSF007N04-          GGCCGGAGGTTTTCAAAGTAACGAGACACAAAAACAGACACTACTAATCTTTATTATACT
JMFN007D12+           GGCCGGAGGTTTTCAAAGTAA-GAGACACAAAAACAGACACTACTAATCTTTATTATACT
                      ____________________________________________________________
consensus             GGCCGGAGGTTTTCAAAGTAACGAGACACAAAAACAGACACTACTAATCTTTATTATACT
 
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JMFN013C11+           TATAAAGCAAACTAATTATGTACATTCAATCGGAGATCCCGGCAAACGTGATGTCTCCGG
rJMSF007N04-          TATAAAGCAAACTAATTATGTACATTCAATCGGAGATCCCGGCAAACGTGATGTCTCCGG
JMFN007D12+           TATAAAGCAAACTAATTATGTACATTCAATCGGAGATCCCGGCAAACGTGATGTCTCCGG
                      ____________________________________________________________
consensus             TATAAAGCAAACTAATTATGTACATTCAATCGGAGATCCCGGCAAACGTGATGTCTCCGG
 
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JMFN013C11+           GGAAACTCGTCGTCGCGGCGCCCCTCGTCGAAGTTCTGTGAGTAGCTAACGGCGTCGTAC
JMSF007N04+                     CGTCGCGGCGCCCCTCGTCGAAGTTCTGTGAGTAGCTAACGGCGTCGTAC
rJMSF007N04-          GGAAACTCGTCGTCGCGGCGCCCCTCGTCGAAGTTCTGTGAGTAGCTAACGGCGTCGTAC
JMFN007D12+           GGAAACTCGTCGTCGCGGCGCCCCTCGTCGAAGTTCTGTGAGTAGCTAACGGCGTCGTAC
                      ____________________________________________________________
consensus             GGAAACTCGTCGTCGCGGCGCCCCTCGTCGAAGTTCTGTGAGTAGCTAACGGCGTCGTAC
 
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JMFN013C11+           TGGAACGACGTCGTCATCGGCTTGGATCTACACATGATCTTGCCGTCGTTCACCAACTTC
JMSF007N04+           TGGAACGACGTCGTCATCGGCTTGGATCTACACATGATCTTGCCGTCGTTCACCAACTTC
rJMSF007N04-          TGGAACGACGTCGTCATCGGCTTGGATCTACACATGATCTTGCCGTCGTTCACCAACTTC
JMFN007D12+           TGGAACGACGTCGTCATCGGCTTGGATCTACACATGATCTTGCCGTCGTTCACCAACTTC
                      ____________________________________________________________
consensus             TGGAACGACGTCGTCATCGGCTTGGATCTACACATGATCTTGCCGTCGTTCACCAACTTC
 
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JMFN013C11+           TTTATGATCTTCCCCCACGAGGAGGAGGAGGAGGAGGACGGTCTCCGGTACCGGCCGCCG
JMSF007N04+           TTTATGATCTTCCCCCACGAGGAGGAGGAGGAGGAGGACGGTCTCCGGTACCGGCCGCCG
rJMSF007N04-          TTTATGATCTTCCCCCACGAGGAGGAGGAGGAGGAGGACGGTCTCCGGTACCGGCCGCCG
JMFN007D12+           TTTATGATCTTCCCCCACGAGGAGGAGGAGGAGGAGGACGGTCTCCGGTACCGGCCGCCG
                      ____________________________________________________________
consensus             TTTATGATCTTCCCCCACGAGGAGGAGGAGGAGGAGGACGGTCTCCGGTACCGGCCGCCG
 
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JMFN013C11+           CCGCCGTCGACGTGGCAGGCGTTTATCCGCGAGTACTCCTCGTGCACGGGGACGCACGAC
JMSF007N04+           CCGCCGTCGACGTGGCAGGCGTTTATCCGCGAGTACTCCTCGTGCACGGGGACGCACGAC
rJMSF007N04-          CCGCCGTCGACGTGGCAGGCGTTTATCCGCGAGTACTCCTCGTGCACGGGGACGCACGAC
JMFN007D12+           CCGCCGTCGACGTGGCAGGCGTTTATCCGCGAGTACTCCTCGTGCACGGGGACGCACGAC
                      ____________________________________________________________
consensus             CCGCCGTCGACGTGGCAGGCGTTTATCCGCGAGTACTCCTCGTGCACGGGGACGCACGAC
 
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JMFN013C11+           GGCGACATGCAGCTGTAGAAGCCGTGATATTGGCGGCGGCGCGTCGGATCGGGCCCCATA
JMSF007N04+           GGCGACATGCAGCTGTAGAAGCCGTGATATTGGCGGCGGCGCGTCGGATCGGGCCCCATA
rJMSF007N04-          GGCGACATGCAGCTGTAGAAGCCGTGATATTGGCGGCGGCGCGTCGGATCGGGCCCCATA
JMFN007D12+           GGCGACATGCAGCTGTAGAAGCCGTGATATTGGCGGCGGCGCGTCGGATCGGGCCCCATA
                      ____________________________________________________________
consensus             GGCGACATGCAGCTGTAGAAGCCGTGATATTGGCGGCGGCGCGTCGGATCGGGCCCCATA
 
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JMFN013C11+           TCCATAGTGTAGTGTATACGCG                                      
JMSF007N04+           TCCATAGTGTAGTGTATACGCGCTAAAGTTGTAAAATGTGAGAAG               
rJMSF007N04-          TCCATAGTGTAGTGTATACGCGCTAAAGTTGTAAAATGTGAGAAG               
JMFN007D12+           TCCATAGTGTAGTGTATACGCGCTAAAGTTGTAAAATGTGAGAAGACGAAAAATGGTTTT
                      ____________________________________________________________
consensus             TCCATAGTGTAGTGTATACGCGCTAAAGTTGTAAAATGTGAGAAGACGAAAAATGGTTTT