| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF016F14 | Sequence | 581 | 002363 (6) | ref|XP_009621368.1| | 9e-39 | PREDICTED: sucrose nonfermenting 4-like protein isoform X2 [Nicotiana tomentosi | 739 | 010352 (8) | ref|XP_009621368.1| | 4e-82 | PREDICTED: sucrose nonfermenting 4-like protein isoform X2 [Nicotiana tomentosi |
| JMFF020E14 | Sequence | 561 | 002363 (6) | ref|XP_009621368.1| | 3e-34 | PREDICTED: sucrose nonfermenting 4-like protein isoform X2 [Nicotiana tomentosi | 741 | 010352 (8) | ref|XP_009621368.1| | 1e-82 | PREDICTED: sucrose nonfermenting 4-like protein isoform X2 [Nicotiana tomentosi |
| JMFF029F13 | Sequence | 426 | 002363 (6) | 734 | 010352 (8) | ref|XP_009801936.1| | 8e-58 | PREDICTED: sucrose nonfermenting 4-like protein isoform X2 [Nicotiana sylvestri | |||
| JMFN006C11 | Sequence | 514 | 010352 (8) | emb|CDO98887.1| | 3e-30 | unnamed protein product [Coffea canephora] | |||||
| JMFN025M11 | Sequence | 526 | 010352 (8) | emb|CDO98887.1| | 3e-32 | unnamed protein product [Coffea canephora] | |||||
| JMSF009G07 | Sequence | 380 | 002363 (6) | 767 | 010352 (8) | ref|XP_009621368.1| | 4e-89 | PREDICTED: sucrose nonfermenting 4-like protein isoform X2 [Nicotiana tomentosi | |||
| JMSF015L02 | Sequence | 527 | 002363 (6) | ref|XP_009621368.1| | 2e-43 | PREDICTED: sucrose nonfermenting 4-like protein isoform X2 [Nicotiana tomentosi | 757 | 010352 (8) | ref|XP_009621368.1| | 2e-92 | PREDICTED: sucrose nonfermenting 4-like protein isoform X2 [Nicotiana tomentosi |
| JMSF037B12 | Sequence | 690 | 002363 (6) | ref|XP_009621368.1| | 4e-51 | PREDICTED: sucrose nonfermenting 4-like protein isoform X2 [Nicotiana tomentosi | 713 | 010352 (8) | ref|XP_009621368.1| | 2e-82 | PREDICTED: sucrose nonfermenting 4-like protein isoform X2 [Nicotiana tomentosi |
This contig is upended
. : . : . : . : . : . :
rJMSF009G07+ CTTCACTTGCTGAAGTACTAAAATATCTTNGTAGGTATTCAGGC
rJMSF015L02+ TTCAGGC
____________________________________________________________
consensus CTTCACTTGCTGAAGTACTAAAATATCTTNGTAGGTATTCAGGC
. : . : . : . : . : . :
rJMSF009G07+ ATTCACCAGCATCTCTTCCCATTCTTCAATTGCCAATTAATGCCATACCATTAGGGACCT
rJMSF037B12+ CTTCAATTGCCAATTAATGCCATACCATTAGGGACCT
rJMSF015L02+ ATTCACCAGCATCTCTTCCCATTCTTCAATTGCCAATTAATGCCATACCATTAGGGACCT
rJMFF020E14+ CTTCAATTGCCAATTAATGCCATACCATTAGGGACCT
rJMFF016F14+ TCAATTGCCAATTAATGCCATACCATTAGGGACCT
rJMFF029F13+ GCCAATTAATGCCATACCATTAGGGACCT
____________________________________________________________
consensus ATTCACCAGCATCTCTTCCCATTCTTCAATTGCCAATTAATGCCATACCATTAGGGACCT
. : . : . : . : . : . :
rJMSF009G07+ -GGGTTCCCAAAATTGGAGAGCCAAATCGACGGCCGTTGGCGATGTTGAGACCTACTGCC
rJMSF037B12+ -GGGTTCCCAAAATTGGAGAGCCAAATCGACGGCCGTTGGCGATGTTGAGACCTACTGCC
rJMSF015L02+ -GGGTTCCCAAAATTGGAGAGCCAAATCGACGGCCGTTGGCGATGTTGAGACCTACTGCC
rJMFF020E14+ -GGGTTCCCAAAATTGGAGAGCCAAATCGACGGCCGTTGGCGATGTTGAGACCTACTGCC
rJMFF016F14+ -GGGTTCCCAAAATTGGAGAGCCAAATCGACGGCCGTTGGCGATGTTGAGACCTACTGCC
rJMFF029F13+ GGGGTTCCCAAAATNGGAGAGCCAAATCGACGGCCGTTGGCGATGTTGAGACNTACTGCC
____________________________________________________________
consensus -GGGTTCCCAAAATTGGAGAGCCAAATCGACGGCCGTTGGCGATGTTGAGACCTACTGCC
. : . : . : . : . : . :
rJMSF009G07+ TCGCTTAGTGCAGCACTGAATTTATTGATTCAAGCTCAAGTTGGTGCAATTCCCATTGTT
rJMSF037B12+ TCGCTTAGTGCAGCACTGAATTTATTGATTCAAGCTCAAGTTGGTGCAATTCCCATTGTT
rJMSF015L02+ TCGCTTAGTGCAGCACTGAATTTATTGATTCAAGCTCAAGTTGGTGCAATTCCCATTGTT
rJMFF020E14+ TCGCTTAGTGCAGCACTGAATTTATTGATTCAAGCTCAAGTTGGTGCAATTCCCATTGTT
rJMFF016F14+ TCGCTTAGTGCAGCACTGAATTTATTGATTCAAGCTCAAGTTGGTGCAATTCCCATTGTT
rJMFF029F13+ TCGCTTAGTGCAGCACTGAATTTATTGATTCAAGCTCAAGTTGGTGCAATTCCCATTGTT
____________________________________________________________
consensus TCGCTTAGTGCAGCACTGAATTTATTGATTCAAGCTCAAGTTGGTGCAATTCCCATTGTT
. : . : . : . : . : . :
rJMSF009G07+ GATGAGAATGACTCATTATTGGATATATATTCTCGAAGTGATATCACAGCCTTGGCCAAG
rJMSF037B12+ GATGAGAATGACTCATTATTGGATATATATTCTCGAAGTGATATCACAGCCTTGGCCAAG
rJMSF015L02+ GATGAGAATGACTCATTATTGGATATATATTCTCGAAGTGATATCACAGCCTTGGCCAAG
rJMFF020E14+ GATGAGAATGACTCATTATTGGATATATATTCTCGAAGTGATATCACAGCCTTGGCCAAG
rJMFF016F14+ GATGAGAATGACTCATTATTGGATATATATTCTCGAAGTGATATCACAGCCTTGGCCAAG
rJMFF029F13+ GATGAGAATGACTCATTATTGGATATATATTCTCGAAGTGATATCACAGCCTTGGCCAAG
____________________________________________________________
consensus GATGAGAATGACTCATTATTGGATATATATTCTCGAAGTGATATCACAGCCTTGGCCAAG
. : . : . : . : . : . :
rJMSF009G07+ GACAAAATTTATACACACATCAATCTTGACGAAATGACCATTCATAAGGCATTGCAGCTT
rJMSF037B12+ GACAAAATTTATACACACATCAATCTTGACGAAATGACCATTCATAAGGCATTGCAGCTT
rJMSF015L02+ GACAAAATTTATACACACATCAATCTTGACGAAATGACCATTCATAAGGCATTGCAGCTT
rJMFF020E14+ GACAAAATTTATACACACATCAATCTTGACGAAATGACCATTCATAAGGCATTGCAGCTT
rJMFF016F14+ GACAAAATTTATACACACATCAATCTTGACGAAATGACCATTCATAAGGCATTGCAGCTT
rJMFF029F13+ GACAAAATTTATACACACATCAATCTTGACGAAATGACCATTCATAAGGCATTGCAGCTT
JMFN025M11- ACACATCAATCTTGACGAAATGACCATTCATAAGGCATTGCAGCTT
JMFN006C11- TGACGAAATGACCATTCATAAGGCATTGCAGCTT
____________________________________________________________
consensus GACAAAATTTATACACACATCAATCTTGACGAAATGACCATTCATAAGGCATTGCAGCTT
. : . : . : . : . : . :
rJMSF009G07+ GGAGAGGAACCGTATGCTTCCCCATACATGGTTGGCAATGAAAGATGTCACATGTGTTTA
rJMSF037B12+ GGAGAGGAACCGTATGCTTCCCCATTCATGGTTGGCAATGAAAGATGTCACATGTGTTTA
rJMSF015L02+ GGAGAGGAACCGTATGCTTCCCCATACATGGTTGGCAATGAAAGATGTCACATGTGTTTA
rJMFF020E14+ GGAGAGGAACCGTATGCTTCCCCATACATGGTTGGCAATGAAAGATGTCACATGTGTTTA
rJMFF016F14+ GGAGAGGAACCGTATGCTTCCCCATACATGGTTGGCAATGAAAGATGTCACATGTGTTTA
rJMFF029F13+ GGAGAGGAACCGTATGCTTCCCCATACATGGTTGGCAATGAAAGATGTCACATGTGTTTA
JMFN025M11- GGAGAGGAACCGTATGCTTCCCCATACATGGTTGGCAATGAAAGATGTCACATGTGTTTA
JMFN006C11- GGAGAGGAACCGTATGCTTCCCCATACATGGTTGGCAATGAAAGATGTCACATGTGTTTA
____________________________________________________________
consensus GGAGAGGAACCGTATGCTTCCCCATACATGGTTGGCAATGAAAGATGTCACATGTGTTTA
. : . : . : . : . : . :
rJMSF009G07+ CGGTCTGACCCGCTCCATAAAGTGATGGACAAGTTATCCAAGCCAGGTGTTAGACGGCTT
rJMSF037B12+ CGGTCTGACCCGCTCCATAAAGTGATGGACAAGTTATCCAAGCCAGGTGTTAGACGGCTT
rJMSF015L02+ CGGTCTGACCCGCTCCATAAAGTGATGGACAAGTTATCCAAGCCAGGTGTTAGACGGCTT
rJMFF020E14+ CGGTCTGACCCGCTCCATAAAGTGATGGACAAGTTATCCAAGCCAGGTGTTAGACGGCTT
rJMFF016F14+ CGGTCTGACCCGCTCCATAAAGTGATGGACAAGTTATCCAAGCCAGGTGTTAGACGGCTT
rJMFF029F13+ CGGTCTGACCCGCTCCATAAAGTGATGGACAAGTTATCCAAGCCAGGTGTTAGACGGCTT
JMFN025M11- CGGTCTGACCCGCTCCATAAAGTGATGGACAAGTTATCCAAGCCAGGTGTTAGACGGCTT
JMFN006C11- CGGTCTGACCCGCTCCATAAAGTGATGGACAAGTTATCCAAGCCAGGTGTTAGACGGCTT
____________________________________________________________
consensus CGGTCTGACCCGCTCCATAAAGTGATGGACAAGTTATCCAAGCCAGGTGTTAGACGGCTT
. : . : . : . : . : . :
rJMSF009G07+ GTGATTGTGGAGGCTGGGAGCAAGCGCGTTGAAGGTATCATATCTCTTAGTGATGTTTTC
rJMSF037B12+ GTGATTGTGGAGGCTGGGAGCAAGCGCGTTGAAGGTATCATATCTCTTAGTGATGTTTTC
rJMSF015L02+ GTGATTGTGGAGGCTGGGAGCAAGCGCGTTGAAGGTATCATATCTCTTAGTGATGTTTTC
rJMFF020E14+ GTGATTGTGGAGGCTGGGAGCAAGCGCGTTGAAGGTATCATATCTCTTAGTGATGTTTTC
rJMFF016F14+ GTGATTGTGGAGGCTGGGAGCAAGCGCGTTGAAGGTATCATATCTCTTAGTGATGTTTTC
rJMFF029F13+ GTGATTGTGGAGGCTGGGAGCAAGCGCGTTGAAGGTATCATATCTCTTAGTGATGTTTTC
JMFN025M11- GTGATTGTGGAGGCTGGGAGCAAGCGCGTTGAAGGTATCATATCTCTTAGTGATGTTTTC
JMFN006C11- GTGATTGTGGAGGCTGGGAGCAAGCGCGTTGAAGGTATCATATCTCTTAGTGATGTTTTC
____________________________________________________________
consensus GTGATTGTGGAGGCTGGGAGCAAGCGCGTTGAAGGTATCATATCTCTTAGTGATGTTTTC
. : . : . : . : . : . :
rJMSF009G07+ CGGTTCTTGCTTGGATAGGGTGGGAGTGGGAACAATGACTTTGATGGTGCCACTGCTGCA
rJMSF037B12+ CGGTTCTTGCTTGGATAGGGTGGGAGTGGGAACAATGACTTTGATGGTGCCACTGCTGCA
rJMSF015L02+ CGGTTCTTGCTTGGATAGGGTGGGAGTGGGAACAATGACTTTGATGGTGCCACTGCTGCA
rJMFF020E14+ CGGTTCTTGCTTGGATAGGGTGGGAGTGGGAACAATGACTTTGATGGTGCCACTGCTGCA
rJMFF016F14+ CGGTTCTTGCTTGGATAGGGTGGGAGTGGGAACAATGACTTTGATGGTGCCACTGCTGCA
rJMFF029F13+ CGGTTCTTGCTTGGATAGGGTGGGAGTGGGAACAATGACTTTGATGGTGCCACTGCTGCA
JMFN025M11- CGGTTCTTGCTTGGATAGGGTGGGAGTGGGAACAATGACTTTGATGGTGCCACTGCTGCA
JMFN006C11- CGGTTCTTGCTTGGATAGGGTGGGAGTGGGAACAATGACTTTGATGGTGCCACTGCTGCA
____________________________________________________________
consensus CGGTTCTTGCTTGGATAGGGTGGGAGTGGGAACAATGACTTTGATGGTGCCACTGCTGCA
. : . : . : . : . : . :
rJMSF009G07+ ACGACGCCCACTTTCAGCAGTGATCTAATCTCAATTCTTTCATGTATACACAACTGGATT
rJMSF037B12+ ACGACGCCCACTTTCAGCAGTGATCTAATCTCAATTCTTTCATGTATACACAACTGGATT
rJMSF015L02+ ACGACGCCCACTTTCAGCAGTGATCTAATCTCAATTCTTTCATGTATACACAACTGGATT
rJMFF020E14+ ACGACGCCCACTTTCAGCAGTGATCTAATCTCAATTCTTTCATGTATACACAACTGGATT
rJMFF016F14+ ACGACGCCCACTTTCAGCAGTGATCTAATCTCAATTCTTTCATGTATACACAACTGGATT
rJMFF029F13+ ACGACGCCCACTTTCAGCAGTGATCTAATCTCAATTCTTTCATGTATACACAACTGGATT
JMFN025M11- ACGACGCCCACTTTCAGCAGTGATCTAATCTCAATTCTTTCATGTATACACAACTGGATT
JMFN006C11- ACGACGCCCACTTTCAGCAGTGATCTAATCTCAATTCTTTCATGTATACACAACTGGATT
____________________________________________________________
consensus ACGACGCCCACTTTCAGCAGTGATCTAATCTCAATTCTTTCATGTATACACAACTGGATT
. : . : . : . : . : . :
rJMSF009G07+ GGCCTCAAATGTTGGGGCCTGGTTCTTTTTACTATGTTGGGCTTCAAATGAGGCGTGATG
rJMSF037B12+ GGCCTCAAATGTTGGGGCCTGGTTCTTTTTACTATGTTGGGCTTCAAATGAGGCGTGATG
rJMSF015L02+ GGCCTCAAATGTTGGGGCCTGGTTCTTTTTACTATGTTGGGCTTCAAATGAGGCGTGATG
rJMFF020E14+ GGCCTCAAATGTTGGGGCCTGGTTCTTTTTACTATGTTGGGCTTCAAATGAGGCGTGATG
rJMFF016F14+ GGCCTCAAATGTTGGGGCCTGGTTCTTTTTACTATGTTGGGCTTCAAATGAGGCGTGATG
rJMFF029F13+ GGCCTCAAATGTTGGGGCCTGGTTCTTTTTACTATGTTGGGCTTCAAATGAGGCGTGATG
JMFN025M11- GGCCTCAAATGTTGGGGCCTGGTTCTTTTTACTATGTTGGGCTTCAAATGAGGCGTGATG
JMFN006C11- GGCCTCAAATGTTGGGGCCTGGTTCTTTTTACTATGTTGGGCTTCAAATGAGGCGTGATG
____________________________________________________________
consensus GGCCTCAAATGTTGGGGCCTGGTTCTTTTTACTATGTTGGGCTTCAAATGAGGCGTGATG
. : . : . : . : . : . :
rJMSF009G07+ TAAATTGTCATATTTGTTTTCTTTTCCTTGTTTCAAAACGTCGTCAAATATGTAGCAGCA
rJMSF037B12+ TAAATTGTCATATTTGTTTTCTTTTCCTTGTTTCAAAACGTCGTCAAATATGTAGCAGCA
rJMSF015L02+ TAAATTGTCATATTTGTTTTCTTTTCCTTGTTTCAAAACGTCGTCAAATATGTAGCAGCA
rJMFF020E14+ TAAATTGTCATATTTGTTTTCTTTTCCTTGTTTCAAAACGTCGTCAAATATGTAGCAGCA
rJMFF016F14+ TAAATTGTCATATTTGTTTTCTTTTCCTTGTTTCAAAACGTCGTCAAATATGTAGCAGCA
rJMFF029F13+ TAAATTGTCATATTTGTTTTCTTTTCCTTGTTTCAAAACGTCGTCAAATATGTAGCAGCA
JMFN025M11- TAAATTGTCATATTTGTTTTCTTTTCCTTGTTTCAAAACGTCGTCAAATATGTAGCAGCA
JMFN006C11- TAAATTGTCATATTTGTTTTCTTTTCCTTGTTTCAAAACGTCGTCAAATATGTAGCAGCA
____________________________________________________________
consensus TAAATTGTCATATTTGTTTTCTTTTCCTTGTTTCAAAACGTCGTCAAATATGTAGCAGCA
. : . : . : . : . : . :
rJMSF009G07+ TTTA
rJMSF037B12+ TTTACTATATAAACTAG
rJMSF015L02+ TTTACTATATAAACTAG
rJMFF020E14+ TTTACTATATAAACTAGTGTCTCCTTGTTCTGCAGCAAAGACAGC
rJMFF016F14+ TTTACTATATAAACTAGTGTCTCCTTGTTCTGCAGCAAAGACAGC
rJMFF029F13+ TTTACTATATAAACTAGTGTCTCCTTGTTCTGCAGCAAAGACAGC
JMFN025M11- TTTACTATATAAACTAGTGTCTCCTTGTTCTGCAGCAAAGACAGCTGCCATTTTTCCTCC
JMFN006C11- TTTACTATATAAACTAGTGTCTCCTTGTTCTGCAGCAAAGACAGCTGCCATTTTTCCTCC
____________________________________________________________
consensus TTTACTATATAAACTAGTGTCTCCTTGTTCTGCAGCAAAGACAGCTGCCATTTTTCCTCC