Contig 010351:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMSF017I20-                       CTCTTCGTTTGCAAGCTAGGTTTGTCAAACATGGCGGAGCTCTAAGG
rJMSF017H20-                     AGCTCTTCGTTTGCAAGCTAGGTTTGTCAAACATGGCGGAGCTCTAAGG
                      ____________________________________________________________
consensus                        AGCTCTTCGTTTGCAAGCTAGGTTTGTCAAACATGGCGGAGCTCTAAGG
 
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rJMSF017I20-          CCTACGAAATCATCCAAAACATATATACAATCTTCATACATATGATAGCTCGAGTTTGGC
rJMSF017H20-          CCTACGAAATCATCCAAAACATATATACAATCTTCATACATATGATAGCTCGAGTTTGGC
                      ____________________________________________________________
consensus             CCTACGAAATCATCCAAAACATATATACAATCTTCATACATATGATAGCTCGAGTTTGGC
 
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rJMSF017I20-          TTAAATTCGAAAGAAATCATACCATATTAAAAACAATAAAATACAATATTGGATATTAAT
rJMSF017H20-          TTAAATTCGAAAGAAATCATACCATATTAAAAACAATAAAATACAATATTGGATATTAAT
                      ____________________________________________________________
consensus             TTAAATTCGAAAGAAATCATACCATATTAAAAACAATAAAATACAATATTGGATATTAAT
 
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rJMSF017I20-          ATGTGTTTCCCCCGTTCTGGTTTGCCTGCAAACACAAGGAATTAATATGAGGAGTGGTGA
rJMSF017H20-          ATGTGTTTCCCCCGTTCTGGTTTGCCTGCAAACACAAGGAATTAATATGAGGAGTGGTGA
                      ____________________________________________________________
consensus             ATGTGTTTCCCCCGTTCTGGTTTGCCTGCAAACACAAGGAATTAATATGAGGAGTGGTGA
 
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rJMSF017I20-          AAAGGCCATCCAGTAAACCCTTGGAAATCCAATGATATGCTGCCTCAGTGAAGTGTGCAC
rJMSF017H20-          AAAGGCCATCCAGTAAACCCTTGGAAATCCAATGATATGCTGCCTCAGTGAAGTGTGCAC
                      ____________________________________________________________
consensus             AAAGGCCATCCAGTAAACCCTTGGAAATCCAATGATATGCTGCCTCAGTGAAGTGTGCAC
 
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rJMSF017I20-          CGTCCCAGTTGATATGATCCGAAGGGTCGACGCAGGCGTGGGTGGGTGGATAGCCACATC
rJMSF017H20-          CGTCCCAGTTGATATGATCCGAAGGGTCGACGCAGGCGTGGGTGGGTGGATAGCCACATC
                      ____________________________________________________________
consensus             CGTCCCAGTTGATATGATCCGAAGGGTCGACGCAGGCGTGGGTGGGTGGATAGCCACATC
 
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rJMSF017I20-          TTCTGCTGGAGTTATAATTGTATGGTCCTCCTCCTCCACAACAAGCCTCTAGTGGTTTGC
rJMSF017H20-          TTCTGCTGGAGTTATAATTGTATGGTCCTCCTCCTCCACAACAAGCCTCTAGTGGTTTGC
                      ____________________________________________________________
consensus             TTCTGCTGGAGTTATAATTGTATGGTCCTCCTCCTCCACAACAAGCCTCTAGTGGTTTGC
 
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rJMSF017I20-          TTTCAAATCCAAAATTTTCTGGGGAGTTGTAAAGTTGTAATCCCGCATTGTAATAGTCAG
rJMSF017H20-          TTTCAAATCCAAAATTTTCTGGGGAGTTGTAAAGTTGTAATCCCGCATTGTAATAGTCAG
                      ____________________________________________________________
consensus             TTTCAAATCCAAAATTTTCTGGGGAGTTGTAAAGTTGTAATCCCGCATTGTAATAGTCAG
 
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rJMSF017I20-          CGTATACAAGGAAGACATTAGGATGACGGTCTCGAATGCGAGACAGTGCCTTTTGAAGAA
rJMSF017H20-          CGTATACAAGGAAGACATTAGGATGACGGTCTCGAATGCGAGACAGTGCCTTTTGAAGAA
                      ____________________________________________________________
consensus             CGTATACAAGGAAGACATTAGGATGACGGTCTCGAATGCGAGACAGTGCCTTTTGAAGAA
 
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rJMSF017I20-          GGATGTTGTGATTTTCTGATTGTTTATTCAGCCAATCCAGACAACCTGTTTTTGGGTTGT
rJMSF017H20-          GGATGTTGTGATTTTCTGATTGTTTATTCAGCCAATCCAGACAACCTGTTTTTGGGTTGT
                      ____________________________________________________________
consensus             GGATGTTGTGATTTTCTGATTGTTTATTCAGCCAATCCAGACAACCTGTTTTTGGGTTGT
 
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rJMSF017I20-          AATCCCCATCATTTGAACCATAGAAGAATGATAACGTGGCGGCTAAACATCCGTCTGCCA
rJMSF017H20-          AATCCCCATCATTTGAACCATAGAAGAATGATAACGTGGCGGCTAAACATCCGTCTGCCA
                      ____________________________________________________________
consensus             AATCCCCATCATTTGAACCATAGAAGAATGATAACGTGGCGGCTAAACATCCGTCTGCCA
 
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rJMSF017I20-          TCATTCCTGGGACCATCATGTTTACCACTCCTAACTCGATCAATTCCTCAACCGCAGAAG
rJMSF017H20-          TCATTCCTGGGACCATCATGTTTACCACTCCTAACTCGATCAATTCCTCAACCGCAGAAG
JMFN005H16+                                            ACTCGATCAATTCCTCAACCGCAGAAG
                      ____________________________________________________________
consensus             TCATTCCTGGGACCATCATGTTTACCACTCCTAACTCGATCAATTCCTCAACCGCAGAAG
 
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rJMSF017I20-          CGACGGCGTCGATGATGAGAGGCTGAAATGACTGGGCATCCTCTACGCTCTTCTGAAAGA
rJMSF017H20-          CGACGGCGTCGATGATGAGAGGCTGAAATGACTGGGCATCCTCTACGCTCTTCTGAAAGA
JMFN005H16+           CGACGGCGTCGATGATGAGAGGCTGAAATGACTGGGCATCCTCTACGCTCTTCTGAAAGA
                      ____________________________________________________________
consensus             CGACGGCGTCGATGATGAGAGGCTGAAATGACTGGGCATCCTCTACGCTCTTCTGAAAGA
 
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rJMSF017I20-          TGGCGTTACCATAATCGTCG                                        
rJMSF017H20-          TGGCGTTACCATAATCGTCG                                        
JMFN005H16+           TGGCGTTACCATAATCGTCGCCGCCGAACGGTCCAAATACGAATAACGATTTTTTAAACA
                      ____________________________________________________________
consensus             TGGCGTTACCATAATCGTCGCCGCCGAACGGTCCAAATACGAATAACGATTTTTTAAACA
 
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JMFN005H16+           TTTCAGTGCAGCTTGAGTTTTTGCAGAGAAATGGGAGCAAATCTCTGAACCATTGGAGTT
                      ____________________________________________________________
consensus             TTTCAGTGCAGCTTGAGTTTTTGCAGAGAAATGGGAGCAAATCTCTGAACCATTGGAGTT
 
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JMSF017I20+                                                                      T
JMFN005H16+           GAGTCCTCATGGATATGTTGTTATGCAGCTCAATACCTCTTTCCTGATAAAACTCAGCGT
                      ____________________________________________________________
consensus             GAGTCCTCATGGATATGTTGTTATGCAGCTCAATACCTCTTTCCTGATAAAACTCAGCGT
 
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JMSF017I20+           CCAGGGCCGTAACTCCGGCGACGGCGAAGTTCACGCCGCCTTCAAAATTGTCTTTCTGGC
JMFN005H16+           CCAGGGCCGTAACTCCGGCGACGGCGAAGTTCACGCCGCCTTCAAAATTGTCTTTCTGGC
                      ____________________________________________________________
consensus             CCAGGGCCGTAACTCCGGCGACGGCGAAGTTCACGCCGCCTTCAAAATTGTCTTTCTGGC
 
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JMSF017I20+           CGCCCAAGTATGGCTGCACGTGCGGAACCCCATAATGCTCCGCGATGAAATCTAGAACAA
JMFN005H16+           CGCCCAAGTATGGCTGCACGTGCGGAACCCCATAATGCTCCGCGATGAAATCTAGAACAA
                      ____________________________________________________________
consensus             CGCCCAAGTATGGCTGCACGTGCGGAACCCCATAATGCTCCGCGATGAAATCTAGAACAA
 
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JMSF017I20+           GACGGCCGTCGGAGCAGCGGCCGGTGGGGTGGTGGAAGAAGGTTTCTCCGTAGGGCGGGA
JMFN005H16+           GACGGCCGTCGGAGCAGCGGCCGGTGGGGTGGTGGAAGAAGGTTTCTCCGTAGGGCGGGA
                      ____________________________________________________________
consensus             GACGGCCGTCGGAGCAGCGGCCGGTGGGGTGGTGGAAGAAGGTTTCTCCGTAGGGCGGGA
 
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JMSF017I20+           GGCCGATGTAGGGGTATCGATCATCAGATTGAAGTCCCTTCAGGCACAAGGCAAGATAAT
JMFN005H16+           GGCCGATGTAGGGGTATCGATCATCAGATTGAAGTCCCTTCAGGCACAAGGCAAGATAAT
                      ____________________________________________________________
consensus             GGCCGATGTAGGGGTATCGATCATCAGATTGAAGTCCCTTCAGGCACAAGGCAAGATAAT
 
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JMSF017I20+           TTCCAGTGTCAGTCAGTGAATCGCCGAATGCAAATATGGAAGTGTAGCATCCATGTGCAA
JMFN005H16+           TTCCAGTGTCAGTCAGTGAATCGCCGAATGCAAATATGGAAGTGTAGCATCCATGTGCAA
                      ____________________________________________________________
consensus             TTCCAGTGTCAGTCAGTGAATCGCCGAATGCAAATATGGAAGTGTAGCATCCATGTGCAA
 
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JMSF017I20+           ACTGAGAAGAAGAAGAAGAAGAA                                     
JMFN005H16+           ACTGAGAAGAAGAAGAAGAAGAAAGCAGTAGAGTGAGAAGAAGAAGAAGAGTGAATCTGA
                      ____________________________________________________________
consensus             ACTGAGAAGAAGAAGAAGAAGAAAGCAGTAGAGTGAGAAGAAGAAGAAGAGTGAATCTGA