| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF012B10 | Sequence | 618 | 000628 (16) | ref|XP_004239121.1| | 9e-118 | PREDICTED: glutamate--glyoxylate aminotransferase 2 [Solanum lycopersicum] | 773 | 010348 (17) | ref|XP_009623844.1| | 9e-139 | PREDICTED: glutamate--glyoxylate aminotransferase 2 [Nicotiana tomentosiformis] |
| JMFF021M03 | Sequence | 374 | 000628 (16) | gb|EPS68501.1| | 9e-43 | hypothetical protein M569_06265, partial [Genlisea aurea] | 543 | 010348 (17) | ref|XP_008467047.1| | 2e-86 | PREDICTED: glutamate--glyoxylate aminotransferase 2-like, partial [Cucumis melo |
| JMFF035P23 | Sequence | 628 | 010348 (17) | ref|XP_008467047.1| | 7e-97 | PREDICTED: glutamate--glyoxylate aminotransferase 2-like, partial [Cucumis melo | |||||
| JMFF046P02 | Sequence | 516 | 000628 (16) | ref|XP_004239121.1| | 6e-92 | PREDICTED: glutamate--glyoxylate aminotransferase 2 [Solanum lycopersicum] | 433 | 010348 (17) | ref|XP_004239121.1| | 2e-41 | PREDICTED: glutamate--glyoxylate aminotransferase 2 [Solanum lycopersicum] |
| JMFN003F16 | Sequence | 610 | 010348 (17) | ref|XP_008467047.1| | 2e-78 | PREDICTED: glutamate--glyoxylate aminotransferase 2-like, partial [Cucumis melo | |||||
| JMSF009C01 | Sequence | 333 | 000628 (16) | gb|EPS68501.1| | 3e-29 | hypothetical protein M569_06265, partial [Genlisea aurea] | 714 | 010348 (17) | ref|XP_008467047.1| | 1e-132 | PREDICTED: glutamate--glyoxylate aminotransferase 2-like, partial [Cucumis melo |
| JMSF012A07 | Sequence | 394 | 000628 (16) | gb|EPS68501.1| | 4e-46 | hypothetical protein M569_06265, partial [Genlisea aurea] | 716 | 010348 (17) | ref|XP_008467047.1| | 7e-132 | PREDICTED: glutamate--glyoxylate aminotransferase 2-like, partial [Cucumis melo |
| JMSF012M05 | Sequence | 492 | 000628 (16) | ref|XP_006357614.1| | 7e-74 | PREDICTED: glutamate--glyoxylate aminotransferase 2-like [Solanum tuberosum] | 757 | 010348 (17) | ref|XP_009623844.1| | 8e-141 | PREDICTED: glutamate--glyoxylate aminotransferase 2 [Nicotiana tomentosiformis] |
| JMSF012M12 | Sequence | 520 | 022065 | ref|XP_006357614.1| | 1e-58 | PREDICTED: glutamate--glyoxylate aminotransferase 2-like [Solanum tuberosum] | 765 | 010348 (17) | ref|XP_009623844.1| | 1e-162 | PREDICTED: glutamate--glyoxylate aminotransferase 2 [Nicotiana tomentosiformis] |
| JMSF018C12 | Sequence | 529 | 000628 (16) | ref|XP_004239121.1| | 2e-74 | PREDICTED: glutamate--glyoxylate aminotransferase 2 [Solanum lycopersicum] | 777 | 010348 (17) | ref|XP_009623844.1| | 7e-146 | PREDICTED: glutamate--glyoxylate aminotransferase 2 [Nicotiana tomentosiformis] |
| JMSF024M07 | Sequence | 676 | 000628 (16) | ref|XP_004239121.1| | 9e-110 | PREDICTED: glutamate--glyoxylate aminotransferase 2 [Solanum lycopersicum] | 721 | 010348 (17) | ref|XP_008467047.1| | 2e-132 | PREDICTED: glutamate--glyoxylate aminotransferase 2-like, partial [Cucumis melo |
| JMSF030B02 | Sequence | 675 | 000628 (16) | ref|XP_006357614.1| | 6e-83 | PREDICTED: glutamate--glyoxylate aminotransferase 2-like [Solanum tuberosum] | 701 | 010348 (17) | ref|XP_008467047.1| | 8e-127 | PREDICTED: glutamate--glyoxylate aminotransferase 2-like, partial [Cucumis melo |
| JMSF033J16 | Sequence | 163 | 010348 (17) | 114 | 010348 (17) | ||||||
| JMSF051H07 | Sequence | 690 | 000628 (16) | ref|XP_004239121.1| | 5e-113 | PREDICTED: glutamate--glyoxylate aminotransferase 2 [Solanum lycopersicum] | 761 | 010348 (17) | ref|XP_009623844.1| | 3e-141 | PREDICTED: glutamate--glyoxylate aminotransferase 2 [Nicotiana tomentosiformis] |
| JMSF052F07 | Sequence | 692 | 000628 (16) | ref|XP_006357614.1| | 6e-113 | PREDICTED: glutamate--glyoxylate aminotransferase 2-like [Solanum tuberosum] | 911 | 010348 (17) | ref|XP_009623844.1| | 1e-176 | PREDICTED: glutamate--glyoxylate aminotransferase 2 [Nicotiana tomentosiformis] |
| JMSF052K03 | Sequence | 668 | 000628 (16) | ref|XP_006357614.1| | 9e-116 | PREDICTED: glutamate--glyoxylate aminotransferase 2-like [Solanum tuberosum] | 892 | 010348 (17) | ref|XP_009623844.1| | 7e-171 | PREDICTED: glutamate--glyoxylate aminotransferase 2 [Nicotiana tomentosiformis] |
This contig is upended
. : . : . : . : . : . :
rJMSF052K03+ C
rJMSF052F07+ CCTACTGGGCAATGTCTTAGC
____________________________________________________________
consensus CCTACTGGGCAATGTCTTAGC
. : . : . : . : . : . :
rJMSF052K03+ GAAGCAAACTTGAAGGAGATATTACAATTCTGTTACCGAGAAAACTTGGTATTGCTTGGG
rJMSF012M12+ ACCGAGAAAACNTGGTATTGCTTGGG
rJMSF052F07+ GAAGCAAACTTGAAGGAGATATTACAATTCTGTTACCGAGAAAACTTGGTATTGCTTGGG
____________________________________________________________
consensus GAAGCAAACTTGAAGGAGATATTACAATTCTGTTACCGAGAAAACTTGGTATTGCTTGGG
. : . : . : . : . : . :
rJMSF052K03+ GATGAAGTTTATCAACAGAACATCTACCAAGATGAGCGGCCCTTTTTAAGTTTAAGGAAG
rJMSF018C12+ AAGGAAG
rJMSF012M12+ GATGAAGTTTATCAACAGAACATCTACCAAGATGAGCGGCCCTTTTTAAGTTCAAGGAAG
rJMSF052F07+ GATGAAGTTTATCAACAGAACATCTACCAAGATGAGCGGCCCTTTTTAAGTTCAAGGAAG
____________________________________________________________
consensus GATGAAGTTTATCAACAGAACATCTACCAAGATGAGCGGCCCTTTTTAAGTTCAAGGAAG
. : . : . : . : . : . :
rJMSF052K03+ GTTTTATTGGATATGGGCCCACCCATAAGCAAAGAACTTCAGCTCGTCTCTTTCCACACG
rJMSF009C01+ TCTTTCCACACG
rJMSF012M05+ GGATATGGGCCCACCCATAAGCAAATAACTTCAGCTCGTCTCTTTCCACACG
rJMSF024M07+ TCTCTTTCCACACG
rJMSF012A07+ TTCCACACG
rJMSF018C12+ GTTTTATTGGATATGGGCCCACCCATAAGCAAAGAACTTCAGCTCGTCTCTTTCCACACG
rJMSF051H07+ GGATATGGGCCCACCCATAAGCAAAGAACTTCAGCTCGTCTCTTTCCACACG
rJMSF012M12+ GTTTTATTGGATATGGGCCCACCCATAAGCAAAGAACTTCAGCTCGTCTCTTTCCACACG
rJMSF052F07+ GTTTTATTGGATATGGGCCCACCCATAAGCAAAGAACTTCAGCTCGTCTCTTTCCACACG
rJMFF012B10+ CCCATAAGCAAAGAACTTCAGCTCGTCTCTTTCCACACG
____________________________________________________________
consensus GTTTTATTGGATATGGGCCCACCCATAAGCAAAGAACTTCAGCTCGTCTCTTTCCACACG
. : . : . : . : . : . :
rJMSF052K03+ GTCTCAAAAGGATACTGGGGTGAATGTGGACAGCGCGGTGGATATTTTGAGATGACTAAT
rJMSF009C01+ GTCTCAAAAGGATACTGGGGTGAATGTGGACAGCGCGGTGGATATTTTGAGATGACTAAT
rJMSF012M05+ GTCTCAAAAGGATACTGGGGTGAATGTGGACAGCGCGGTGGATATTTTGAGATGACTAAT
rJMSF024M07+ GTCTCAAAAGGATACTGGGGTGAATGTGGACAGCGCGGTGGATATTTTGAGATGACTAAT
rJMSF012A07+ GTCTCAAAAGGATACTGGGGTGAATGTGGACAGCGCGGTGGATATTTTGAGATGACTAAT
rJMSF018C12+ GTCTCAAAAGGATACTGGGGTGAATGTGGACAGCGCGGTGGATATTTTGAGATGACTAAT
rJMSF051H07+ GTCTCAAAAGGATACTGGGGTGAATGTGGACAGCGCGGTGGATATTTTGAGATGACTAAT
rJMSF012M12+ GTCTCAAAAGGATACTGGGGTGAATGTGGACAGCGCGGTGGATATTTTGAGATGACTAAT
rJMSF030B02+ AAGGATACTGGGGTGAATGTGGACAGCGCGGTGGATATTTTGAGATGACTAAT
rJMSF052F07+ GTCTCAAAAGGATACTGGGGTGAATGTGGACAGCGCGGTGGATATTTTGAGATGACTAAT
rJMFF012B10+ GTCTCAAAAGGATACTGGGGTGAATGTGGACAGCGCGGTGGATATTTTGAGATGACTAAT
____________________________________________________________
consensus GTCTCAAAAGGATACTGGGGTGAATGTGGACAGCGCGGTGGATATTTTGAGATGACTAAT
. : . : . : . : . : . :
rJMSF052K03+ ATCCCTCCCAGGAGTGTTGAGGAGATATACAAGGTTGCTTCAATATCCCTTAGTCCAAAT
rJMSF009C01+ ATCCCTCCCAGGAGTGTTGAGGAGATATACAAGGTTGCTTCAATATCCCTTAGTCCAAAT
rJMSF012M05+ ATCCCTCCCAGGAGTGTTGAGGAGATATACAAGGTTGCTTCAATATCCCTTAGTCCAAAT
rJMSF024M07+ ATCCCTCCCAGGAGTGTTGAGGAGATATACAAGGTTGCTTCAATATCCCTTAGTCCAAAT
rJMSF012A07+ ATCCCTCCCAGGAGTGTTGAGGAGATATACAAGGTTGCTTCAATATCCCTTAGTCCAAAT
rJMSF018C12+ ATCCCTCCCAGGAGTGTTGAGGAGATATACAAGGTTGCTTCAATATCCCTTAGTCCAAAT
rJMSF051H07+ ATCACTCCCAGGAGTGTTGAGGAGATATACAAGGTTGCTTCAATATCCCTTAGTCCAAAT
rJMSF012M12+ ATCCCTCCCAGGAGTGTTGAGGAGATATACAAGGTTGCTTCAATATCCCTTAGTCCAAAT
rJMFF035P23+ CTCCCAGGAGTGTTGAGGAGATATACAAGGTTGCTTCAATATCCCTTAGTCCAAAT
rJMSF030B02+ ATCCCTCCCAGGAGTGTTGAGGAGATATACAAGGTTGCTTCAATATCCCTTAGTCCAAAT
rJMSF052F07+ ATCCCTCCCAGGAGTGTTGAGGAGATATACAAGGTTGCTTCAATATCCCTTAGTCCAAAT
rJMFF012B10+ ATCCCTCCCAGGAGTGTTGAGGAGATATACAAGGTTGCTTCAATATCCCTTAGTCCAAAT
____________________________________________________________
consensus ATCCCTCCCAGGAGTGTTGAGGAGATATACAAGGTTGCTTCAATATCCCTTAGTCCAAAT
. : . : . : . : . : . :
rJMSF052K03+ GTG-CCCGGGCAGATATTTCTAGGGCTAATGGTGAACCCTCCTAAACCTGGAGATATCTC
rJMSF009C01+ GTG-CCCGGGCAGATATTTCTAGGGCTAATGGTGAACCCTCCTAAACCTGGAGATATCTC
rJMSF012M05+ GTG-CCCGGGCAGATATTTCTAGGGCTAATGGTGAACCCTCCTAAACCTGGAGATATCTC
rJMSF024M07+ GTG-CCCGGGCAGATATTTCTAGGGCTAATGGTGAACCCTCCTAAACCTGGAGATATCTC
rJMSF012A07+ GTG-CCCGGGCAGATATTTCTAGGGCTAATGGTGAACCCTCCTAAACCTGGAGATATCTC
rJMSF018C12+ GTG-CCCGGGCAGATATTTCTAGGGCTAATGGTGAACCCTCCTAAACCTGGAGATATCTC
rJMSF051H07+ GTG-CCCGGGCAGATATTTCTAGGGCTAATGGTGAACCCTCCTAAACCTGGAGATATCTC
rJMSF012M12+ GTG-CCCGGGCAGATATTTCTAGGGCTAATGGTGAACCCTCCTAAACCTGGAGATATCTC
rJMFF035P23+ GTGCCCCGGGCAGATATTTCTAGGGCTAATGGTGAACCCTCCTAAACCTGGAGATATCTC
rJMSF030B02+ GTG-CCCGGGCAGATATTTCTAGGGCTAATGGTGAACCCTCCTAAACCTGGAGATATCTC
rJMSF052F07+ GTG-CCCGGGCAGATATTTCTAGGGCTAATGGTGAACCCTCCTAAACCTGGAGATATCTC
rJMFF021M03+ TGGAGATATCTC
rJMFF012B10+ GTG-CCCGGGCAGATATTTCTAGGGCTAATGGTGAACCCTCCTAAACCTGGAGATATCTC
____________________________________________________________
consensus GTG-CCCGGGCAGATATTTCTAGGGCTAATGGTGAACCCTCCTAAACCTGGAGATATCTC
. : . : . : . : . : . :
rJMSF052K03+ TTATGATCAATTTGTTAGGGAAAGCAAAGGTATCCTTGAGTCGCTAAGGAAGAGGGCACG
rJMSF009C01+ TTATGATCAATTTGTTAGGGAAAGCAAAGGTATCCTTGAGTCGCTAAGGAAGAGGGCACG
rJMSF012M05+ TTATGATCAATTTGTTAGGGAAAGCAAAGGTATCCTTGAGTCGCTAAGGAAGAGGGCACG
rJMSF024M07+ TTATGATCAATTTGTTAGGGAAAGCAAAGGTATCCTTGAGTCGCTAAGGAAGAGGGCACG
rJMSF012A07+ TTATGATCAATTTGTTAGGGAAAGCAAAGGTATCCTTGAGTCGCTAAGGAAGAGGGCACG
rJMSF018C12+ TTATGATCAATTTGTTAGGGAAAGCAAAGGTATCCTTGAGTCGCTAAGGAAGAGGGCACG
rJMSF051H07+ TTATGATCAATTTGTTAGGGAAAGCAAAGGTATCCTTGAGTCGCTAAGGAAGAGGGCACG
rJMSF012M12+ TTATGATCAATTTGTTAGGGAAGGCAAAGGTATCCTTGAGTCGCTAAGGAAGAGGGCACG
rJMFF035P23+ TTATGATCAATTTGTTAGGGAAAGCAAAGGTATCCTTGAGTCGCTAAGGAAGAGGGCACG
rJMSF030B02+ TTATGATCAATTTGTTAGGGAAAGCAAAGGTATCCTTGAGTCGCTAAGGAAGAGGGCACG
rJMSF052F07+ TTATGATCAATTTGTTAGGGAAAGCAAAGGTATCCTTGAGTCGCTAAGGAAGAGGGCACG
rJMFF021M03+ TTATGATCAATTTGTTAGGGAAAGCAAAGGTATCCTTGAGTCGCTAAGGAAGAGGGCACG
rJMFF012B10+ TTATGATCAATTTGTTAGGGAAAGCAAAGGTATCCTTGAGTCGCTAAGGAAGAGGGCACG
JMFN003F16+ AGCAAAGGTATCCTTGAGTCGCTAAGGAAGAGGGCACG
____________________________________________________________
consensus TTATGATCAATTTGTTAGGGAAAGCAAAGGTATCCTTGAGTCGCTAAGGAAGAGGGCACG
. : . : . : . : . : . :
rJMSF052K03+ TATAATGACCGATGGATTCAATAGCTGCAGAAATGTTGTCTGTAATTTCACAGAAGGTGC
rJMSF009C01+ TATAATGACCGATGGATTCAATAGCTGCAGAAATGTTGTCTGTAATTTCACAGAAGGTGC
rJMSF012M05+ TATAATGACCGATGGATTCAATAGCTGCAGAAATGTTGTCTGTAATTTCACAGAAGGTGC
rJMSF024M07+ TATAATGACCGATGGATTCAATAGCTGCAGAAATGTTGTCTGTAATTTCACAGAAGGTGC
rJMSF012A07+ TATAATGACCGATGGATTCAATAGCTGCAGAAATGTTGTCTGTAATTTCACAGAAGGTGC
rJMSF018C12+ TATAATGACCGATGGATTCAATAGCTGCAGAAATGTTGTCTGTAATTTCACAGAAGGTGC
rJMSF051H07+ TATAATGACCGATGGATTCAATAGCTGCAGAAATGTTGTCTGTAATTTCACAGAAGGTGC
rJMSF012M12+ TATAATGACCGATGGATTCAATAGCTGCAGAAATGTTGTCTGTAATTTCACAGAAGGTGC
rJMFF035P23+ TATAATGACCGATGGATTCAATAGCTGCAGAAATGTTGTCTGTAATTTCACAGAAGGTGC
rJMSF030B02+ TATAATGACCGATGGATTCAATAGCTGCAGAAATGTTGTCTGTAATTTCACAGAAGGTGC
rJMSF052F07+ TATAATGACCGATGGATTCAATAGCTGCAGAAATGTTGTCTGTAATTTCACAGAAGGTGC
rJMFF021M03+ TATAATGACCGATGGATTCAATAGCTGCAGAAATGTTGTCTGTAATTTCACAGAAGGTGC
rJMFF012B10+ TATAATGACCGATGGATTCAATAGCTGCAGAAATGTTGTCTGTAATTTCACAGAAGGTGC
JMFN003F16+ TATAATGACCGATGGATTCAATAGCTGCAGAAATGTTGTCTGTAATTTCACAGAAGGTGC
____________________________________________________________
consensus TATAATGACCGATGGATTCAATAGCTGCAGAAATGTTGTCTGTAATTTCACAGAAGGTGC
. : . : . : . : . : . :
rJMSF052K03+ CATGTATTCCTTCCCACAAATACGCTTGCCCCCAAGAGCTATTGAGACTGCACAAGGTCT
rJMSF009C01+ CATGTATTCCTTCCCACAAATACGCTTGCCCCCAAGAGCTATTGAGACTGCACAAGGTCT
rJMSF012M05+ CATGTATTCCTTCCCACAAATACGCTTGCCCCCAAGAGCTATTGAGACTGCACAAGGTCT
rJMSF024M07+ CATGTATTCCTTCCCACAAATACGCTTGCCCCCAAGAGCTATTGAGACTGCACAAGGTCT
rJMSF012A07+ CATGTATTCCTTCCCACAAATACGCTTGCCCCCAAGAGCTATTGAGACTGCACAAGGTCT
rJMSF018C12+ CATGTATTCCTTCCCACAAATACGCTTGCCCCCAAGAGCTATTGAGACTGCACAAGGTCT
rJMSF051H07+ CATGTATTCCTTCCCACAAATACGCTTGCCCCCAAGAGCTATTGAGACTGCACAAGGTCT
rJMSF012M12+ CATGTATTCCTTCCCACAAATACGCTTGCCCCCAAGAGCTATTGAGACTGCACAAGGTCT
rJMFF035P23+ CATGTATTCCTTCCCACAAATACGCTTGCCCCCAAGAGCTATTGAGACTGCACAAGGTCT
rJMSF030B02+ CATGTATTCCTTCCCACAAATACGCTTGCCCCCAAGAGCTATTGAGACTGCACAAGGTCT
rJMSF052F07+ CATGTATTCCTTCCCACAAATACGCTTGCCCCCAAGAGCTATTGAGACTGCACAAGGTCT
rJMFF021M03+ CATGTATTCCTTCCCACAAATACGCTTGCCCCCAAGAGCTATTGAGACTGCACAAGGTCT
rJMFF012B10+ CATGTATTCCTTCCCACAAATACGCTTGCCCCCAAGAGCTATTGAGACTGCACAAGGTCT
rJMFF046P02+ TATTGAGACTGCACAAGGTCT
JMFN003F16+ CATGTATTCCTTCCCACAAATACGCTTGCCCCCAAGAGCTATTGAGACTGCACAAGGTCT
____________________________________________________________
consensus CATGTATTCCTTCCCACAAATACGCTTGCCCCCAAGAGCTATTGAGACTGCACAAGGTCT
. : . : . : . : . : . :
rJMSF052K03+ TGGAAAAGCTCCTGATGTTTACTACTGTCTCAAGCTCTTGGAAGCCACCGGCATCTCCAC
rJMSF009C01+ TGGAAAAGCTCCTGATGTTTACTACTGTCTCAAGCTCTTGGAAGCCACCGGCATCTCCAC
rJMSF012M05+ TGGAAAAGCTCCTGATGTTTACTACTGTCTCAAGCTCTTGGAAGCCACCGGCATCTCCAC
rJMSF024M07+ TGGAAAAGCTCCTGATGTTTACTACTGTCTCAAGCTCTTGGAAGCCACCGGCATCTCCAC
rJMSF012A07+ TGGAAAAGCTCCTGATGTTTACTACTGTCTCAAGCTCTTGGAAGCCACCGGCATCTCCAC
rJMSF018C12+ TGGAAAAGCTCCTGATGTTTACTACTGTCTCAAGCTCTTGGAAGCCACCGGCATCTCCAC
rJMSF051H07+ TGGAAAAGCTCCTGATGTTTACTACTGTCTCAAGCTCTTGGAAGCCACCGGCATCTCCAC
rJMSF012M12+ TGGAAAAGCTCCTGATGTTTACTACTGTCTCAAGCTCTTGGAAGCCACCGGCATCTCCAC
rJMFF035P23+ TGGAAAAGCTCCTGATGTTTACTACTGTCTCAAGCTCTTGGAAGCCACCGGCATCTCCAC
rJMSF030B02+ TGGAAAAGCTCCTGATGTTTACTACTGTCTCAAGCTCTTGGAAGCCACCGGCATCTCCAC
rJMSF052F07+ TGGAAAAGCTCCTGATGTTTACTACTGTCTCAAGCTCTTGGAAGCCACCGGCATCTCCAC
rJMFF021M03+ TGGAAAAGCTCCTGATGTTTACTACTGTCTCAAGCTCTTGGAAGCCACCGGCATCTCCAC
rJMFF012B10+ TGGAAAAGCTCCTGATGTTTACTACTGTCTCAAGCTCTTGGAAGCCACCGGCATCTCCAC
rJMFF046P02+ GNGAAAAGCTCCTGATGTTTACTACTGTCTCAAGCTCTTGGAAGCCACCGGCATCTCCAC
JMFN003F16+ TGGAAAAGCTCCTGATGTTTACTACTGTCTCAAGCTCTTGGAAGCCACCGGCATCTCCAC
____________________________________________________________
consensus TGGAAAAGCTCCTGATGTTTACTACTGTCTCAAGCTCTTGGAAGCCACCGGCATCTCCAC
. : . : . : . : . : . :
rJMSF052K03+ CGTCCCTGGCTCAGGGTTCGGTCAAAAGGAAGGGGTTTTCCACCTTAGGACGACTATCTT
rJMSF009C01+ CGTCCCTGGCTCAGGGTTCGGTCAAAAGGAAGGGGTTTTCCACCTTAGGACGACTATCTT
rJMSF012M05+ CGTCCCTGGCTCAGGGTTCGGTCAAAAGGAAGGGGTTTTCCACCTTAGGACGACTATCTT
rJMSF024M07+ CGTCCCTGGCTCAGGGTTCGGTCAAAAGGAAGGGGTTTTCCACCTTAGGACGACTATCTT
rJMSF012A07+ CGTCCCTGGCTCAGGGTTCGGTCAAAAGGAAGGGGTTTTCCACCTTAGGACGACTATCTT
rJMSF018C12+ CGTCCCTGGCTCAGGGTTCGGTCAAAAGGAAGGGGTTTTCCACCTTAGGACGACTATCTT
rJMSF051H07+ CGTCCCTGGCTCAGGGTTCGGTCAAAAGGAAGGGGTTTTCCACCTTAGGACGACTATCTT
rJMSF012M12+ CGTCCCTGGCTCAGGGTTCGGTCAAAAGGAAGGGGTTTTCCACCTTAGGACGACTATCTT
rJMFF035P23+ CGTCCCTGGCTCAGGGTTCGGTCAAAAGGAAGGGGTTTTCCACCTTAGGACGACTATCTT
rJMSF030B02+ CGTCCCTGGCTCAGGGTTCGGTCAAAAGGAAGGGGTTTTCCACCTTAGGACGACTATCTT
rJMSF052F07+ CGTCCCTGGCTCAGGGTTCGGTCAAAAGGAAGGGGTTTTCCACCTTAGGACGACTATCTT
rJMFF021M03+ CGTCCCTGGCTCAGGGTTCGGTCAAAAGGAAGGGGTTTTCCACCTTAGGACGACTATCTT
rJMFF012B10+ CGTCCCTGGCTCAGGGTTCGGTCAAAAGGAAGGGGTTTTCCACCTTAGGACGACTATCTT
rJMFF046P02+ CGTCCCTGGCTCAGGGTTCGGTCAAAAGGAAGGGGTTTTCCACCTTAGGACGACTATCTT
JMFN003F16+ CGTCCCTGGCTCAGGGTTCGGTCAAAAGGAAGGGGTTTTCCACCTTAGGACGACTATCTT
____________________________________________________________
consensus CGTCCCTGGCTCAGGGTTCGGTCAAAAGGAAGGGGTTTTCCACCTTAGGACGACTATCTT
. : . : . : . : . : . :
rJMSF052K03+ GCCTGCTGAGGAAGACATGCCAGCAATAATGGAGAGTTTCAAGAAGTTCAACGACGAGTT
rJMSF009C01+ GCCTGCTGAGGAAGACATGCCAGCAATAATGGAGAGTTTCAAGAAGTTCAACGACGAGTT
rJMSF012M05+ GCCTGCTGAGGAAGACATGCCAGCAATAATGGAGAGTTTCAAGAAGTTCAACGACGAGTT
rJMSF024M07+ GCCTGCTGAGGAAGACATGCCAGCAATAATGGAGAGTTTCAAGAAGTTCAACGACGAGTT
rJMSF012A07+ GCCTGCTGAGGAAGACATGCCAGCAATAATGGAGAGTTTCAAGAAGTTCAACGACGAGTT
rJMSF018C12+ GCCTGCTGAGGAAGACATGCCAGCAATAATGGAGAGTTTCAAGAAGTTCAACGACGAGTT
rJMSF051H07+ GCCTGCTGAGGAAGACATGCCAGCAATAATGGAGAGTTTCAAGAAGTTCAACGACGAGTT
rJMSF012M12+ GCCTGCTGAGGAAGACATGCCAGCAATAATGGAGAGTTTCAAGAAGTTCAACGACGAGTT
rJMFF035P23+ GCCTGCTGAGGAAGACATGCCAGCAATAATGGAGAGTTTCAAGAAGTTCAACGACGAGTT
rJMSF030B02+ GCCTGCTGAGGAAGACATGCCAGCAATAATGGAGAGTTTCAAGAAGTTCAACGACGAGTT
rJMSF052F07+ GCCTGCTGAGGAAGACATGCCAGCAATAATGGAGAGTTTCAAGAAGTTCAACGACGAGTT
rJMFF021M03+ GCCTGCTGAGGAAGACATGCCAGCAATAATGGAGAGTTTCAAGAAGTTCAACGACGAGTT
rJMFF012B10+ GCCTGCTGAGGAAGACATGCCAGCAATAATGGAGAGTTTCAAGAAGTTCAACGACGAGTT
rJMFF046P02+ GCCTGCTGAGGAAGACATGCCAGCAATAATGGAGAGTTTCAAGAAGTTCAACGACGAGTT
JMFN003F16+ GCCTGCTGAGGAAGACATGCCAGCAATAATGGAGAGTTTCAAGAAGTTCAACGACGAGTT
____________________________________________________________
consensus GCCTGCTGAGGAAGACATGCCAGCAATAATGGAGAGTTTCAAGAAGTTCAACGACGAGTT
. : . : . : . : . : . :
rJMSF052K03+ CATGGATCAATATGAAGACCACAGAGGTTATTCAAGAATGTGACAGATTGCTGATAATAT
rJMSF009C01+ CATGGATCAATATGAAGACCACAGAGGTTATTCAAGAATGTGACAGATTGCTGATAATAT
rJMSF012M05+ CATGGATCAATATGAAGACCACAGAGGTTATTCAAGAATGTGACAGATTGCTGATAATAT
rJMSF024M07+ CATGGATCAATATGAAGACCACAGAGGTTATTCAAGAATGTGACAGATTGCTGATAATAT
rJMSF012A07+ CATGGATCAATATGAAGACCACAGAGGTTATTCAAGAATGTGACAGATTGCTGATAATAT
rJMSF018C12+ CATGGATCAATATGAAGACCACAGAGGTTATTCAAGAATGTGACAGATTGCTGATAATAT
rJMSF033J16+ GCTGATAATAT
rJMSF051H07+ CATGGATCAATATGAAGACCACAGAGGTTATTCAAGAATGTGACAGATTGCTGATAATAT
rJMSF012M12+ CATGGATCAATATGAAGACCACAGAGGTTATTCAAGAATGTGACAGATTGCTGATAATAT
rJMFF035P23+ CATGGATCAATATGAAGACCACAGAGGTTATTCAAGAATGTGACAGATTGCTGATAATAT
rJMSF030B02+ CATGGATCAATATGAAGACCACAGAGGTTATTCAAGAATGTGACAGATTGCTGATAATAT
rJMSF052F07+ CATGGATCAATATGAAGACCACAGAGGTTATTCAAGAATGTGACAGATTGCTGATAATAT
rJMFF021M03+ CATGGATCAATATGAAGACCACAGAGGTTATTCAAGAATGTGACAGATTGCTGATAATAT
rJMFF012B10+ CATGGATCAATATGAAGACCACAGAGGTTATTCAAGAATGTGACAGATTGCTGATAATAT
JMSF033J16- GCTGATAATAT
rJMFF046P02+ CATGGATCAATATGAAGACCACAGAGGTTATTCAAGAATGTGACAGATTGCTGATAATAT
JMFN003F16+ CATGGATCAATATGAAGACCACAGAGGTTATTCAAGAATGTGACAGATTGCTGATAATAT
____________________________________________________________
consensus CATGGATCAATATGAAGACCACAGAGGTTATTCAAGAATGTGACAGATTGCTGATAATAT
. : . : . : . : . : . :
rJMSF052K03+ GAAACAACTCTTGAAATCACATAAATAAATTCTATAAATACTCTTTCCTTTCTCAGTTCA
rJMSF009C01+ GAAACAACTCTTGAAATCACATAAATAAATTCTATAAATACTCTTTCCTTTCTCAGTTCA
rJMSF012M05+ GAAACAACTCTTGAAATCACATAAATAAATTCTATAAATACTCTTTCCTTTCTCAGTTCA
rJMSF024M07+ GAAACAACTCTTGAAATCACATAAATAAATTCTATAAATACTCTTTCCTTTCTCAGTTCA
rJMSF012A07+ GAAACAACTCTTGAAATCACATAAATAAATTCTATAAATACTCTTTCCTTTCTCAGTTCA
rJMSF018C12+ GAAACAACTCTTGAAATCACATAAATAAATTCTATAAATACTCTTTCCTTTCTCAGTTCA
rJMSF033J16+ GAAACAACTCTTGAAATCACATAAATAAATTCTATAAATACTCTTTCCTTTCTCAGTTCA
rJMSF051H07+ GAAACAACTCTTGAAATCACATAAATAAATTCTATAAATACTCTTTCCTTTCTCAGTTCA
rJMSF012M12+ GAAACAACTCT
rJMFF035P23+ GAAACAACTCTTGAAATCACATAAATAAATTCTATAAATACTCTTTCCTTTCTCAGTTCA
rJMSF030B02+ GAAACAACTCTTGAAATCACATAAATAAATTCTATAAATACTCTTTCCTTTCTCAGTTCA
rJMSF052F07+ GAAACAACTCTTGAAATCACATAAATAAATTCTATAAATACTCTTTCCTTTCTCAGTTCA
rJMFF021M03+ GAAACAACTCTTGAAATCACATAAATAAATTCTATAAATACTCTTTCCTTTCTCAGTTCA
rJMFF012B10+ GAAACAACTCTTGAAATCACATAAATAAATTCTATAAATACTCTTTCCTTTCTCAGTTCA
JMSF033J16- GAAACAACTCTTGAAATCACATAAATAAATTCTATAAATACTCTTTCCTTTCTCAGTTCA
rJMFF046P02+ GAAACAACTCTTGAAATCACATAAATAAATTCTATAAATACTCTTTCCTTTCTCAGTTCA
JMFN003F16+ GAAACAACTCTTGAAATCACATAAATAAATTCTATAAATACTCTTTCCTTTCTCAGTTCA
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consensus GAAACAACTCTTGAAATCACATAAATAAATTCTATAAATACTCTTTCCTTTCTCAGTTCA
. : . : . : . : . : . :
rJMSF052K03+ CTCACTGATTGTTTCAGGTTATGTATGTTCCAAATAC
rJMSF009C01+ CTCACTGATTGTTTCAGGTTATGTATGTTCCAAATACTTGAGC
rJMSF012M05+ CTCACTGATTGTTTCAGGTTATGTATGTTCCAAATAC-TTGAGCATC
rJMSF024M07+ CTCACTGATTGTTTCAGGTTATGTATGTTCCAAATAC-TTGAGCATCCA
rJMSF012A07+ CTCACTGATTGTTTCAGGTTATGTATTTTCCAAATAC-TTGAGCATCCA
rJMSF018C12+ CTCACTGATTGTTTCAGGTTATGTATGTTCCAAATAC-TTGAGCATCCA
rJMSF033J16+ CTCACTGATTGTTTCAGGTTATGTATGTTCCAAATACTTGAGC
rJMSF051H07+ CTCACTGATTGTTTCAGGTTATGTATGTTCCAAATAC-TTGAGCATCCA
rJMFF035P23+ CTCACTGATTGTTTCAGGTTATGTA
rJMSF030B02+ CTCACTGATTGTTTCAGGTTATGTATGTTCCAAATACTTTGAGCATCCA
rJMSF052F07+ CTCACTGATTGTTTCAGGTTATGTATGTTCCAAATACTTTGAGCATCCATC
rJMFF021M03+ CTCACTGATTGTTTCAGGTTATGTATGTTCCAAATACTTTGAGCATCCATC
rJMFF012B10+ CTCACTGATTGTTTCAGGTTATGTATGTTCCAAATACTTTGAGCATCCATCTACTTTCAA
JMSF033J16- CTCACTGATTGTTTCAGGTTATGTATGTTCCAAATACTTTGAGCATCCATCTACTTTCAA
rJMFF046P02+ CTCACTGATTGTTTCAGGTTATGTATGTTCCAAATACTTTGAGCATCCATCTACTTTCAA
JMFN003F16+ CTCACTGATTGTTTCAGGTTATGTATGTTCCAAATACTTTGAGCATCCATCTACTTTCAA
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consensus CTCACTGATTGTTTCAGGTTATGTATGTTCCAAATACTTTGAGCATCCATCTACTTTCAA
. : . : . : . : . : . :
rJMFF012B10+ TATATTTAGTCCA
JMSF033J16- TATATTTAGTCCATAAATTTCTAAA
rJMFF046P02+ TATATTTAGTCCATAAATTTCTAAAC
JMFN003F16+ TATATTTAGTCCATAAATTTCTAAACXXXXXXXXXXXXXXXXXXCTCGAGACTAGTTCTC
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consensus TATATTTAGTCCATAAATTTCTAAACNNNNNNNNNNNNNNNNNNCTCGAGACTAGTTCTC