| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF033H19 | Sequence | 488 | 003664 (5) | gb|KDP30591.1| | 4e-20 | hypothetical protein JCGZ_16244 [Jatropha curcas] | 783 | 010347 (7) | ref|XP_004229548.1| | 233 | PREDICTED: uncharacterized protein LOC101264758 [Solanum lycopersicum] |
| JMFF033H20 | Sequence | 178 | 010347 (7) | ||||||||
| JMFN002C03 | Sequence | 565 | 010347 (7) | ref|XP_004229548.1| | 105 | PREDICTED: uncharacterized protein LOC101264758 [Solanum lycopersicum] | |||||
| JMSF019B07 | Sequence | 417 | 003664 (5) | 776 | 010347 (7) | ref|XP_004229548.1| | 233 | PREDICTED: uncharacterized protein LOC101264758 [Solanum lycopersicum] | |||
| JMSF021J13 | Sequence | 611 | 003664 (5) | ref|XP_009613301.1| | 126 | PREDICTED: uncharacterized protein LOC104106458 [Nicotiana tomentosiformis] | 774 | 010347 (7) | ref|XP_004229548.1| | 234 | PREDICTED: uncharacterized protein LOC101264758 [Solanum lycopersicum] |
| JMSF034C22 | Sequence | 680 | 003664 (5) | ref|XP_009613301.1| | 169 | PREDICTED: uncharacterized protein LOC104106458 [Nicotiana tomentosiformis] | 692 | 010347 (7) | ref|XP_004229548.1| | 179 | PREDICTED: uncharacterized protein LOC101264758 [Solanum lycopersicum] |
| JMSF044J08 | Sequence | 523 | 003664 (5) | ref|XP_009785344.1| | 103 | PREDICTED: uncharacterized protein LOC104233617 [Nicotiana sylvestris] | 790 | 010347 (7) | ref|XP_004229548.1| | 235 | PREDICTED: uncharacterized protein LOC101264758 [Solanum lycopersicum] |
This contig is upended
. : . : . : . : . : . :
rJMSF044J08+ ATTCAGATCAACAACGAA
____________________________________________________________
consensus ATTCAGATCAACAACGAA
. : . : . : . : . : . :
rJMSF019B07+ TTTCCAGCTATCAAAGTTCTCAATATGATAT
rJMSF044J08+ ATCGCCATGGGAGCCAGCATTTCCCCTCTTTTCCAGCTATCAAAGTTCTCAATATGATAT
rJMSF021J13+ TTCCAGCTATCAAAGTTCTCAATATGATAT
rJMFF033H19+ TTCCAGCTATCAAAGTTCTCAATATGATAT
____________________________________________________________
consensus ATCGCCATGGGAGCCAGCATTTCCCCTCTTTTCCAGCTATCAAAGTTCTCAATATGATAT
. : . : . : . : . : . :
rJMSF034C22+ AGAGGGTAACTGGTGGATGCAATTTGGGAATGA
rJMSF019B07+ CAGCATTCTTGTCTGGAAGGATCCGAAAGAGGGTAACTGGTGGATGCAATTTGGGAATGA
rJMSF044J08+ CAGCATTCTTGTCTGGAAGGATCCGAAAGAGGGTAACTGGTGGATGCAATTTGGGAATGA
rJMSF021J13+ CAGCATTCTTGTCTGGAAGGATCCGAAAGAGGGTAACTGGTGGATGCAATTTGGGAATGA
rJMFF033H19+ CAGCATTCTTGTCTGGAAGGATCCGAAAGAGGGTAACTGGTGGATGCAATTTGGGAATGA
____________________________________________________________
consensus CAGCATTCTTGTCTGGAAGGATCCGAAAGAGGGTAACTGGTGGATGCAATTTGGGAATGA
. : . : . : . : . : . :
rJMSF034C22+ TAACGTGTTGGGGTACTGGCCAGCATTGCTGTTTTTCTAACCTTAAAGACAGTGCTTCAA
rJMSF019B07+ TAACGTGTTGGGGTACTGGCCAGCATTGCTG-TTTTCTAACCTTAAAGACAGTGCTTCAA
rJMSF044J08+ TAACGTGTTGGGGTACTGGCCAGCATTGCTG-TTTTCTAACCTTAAAGACAGTGCTTCAA
rJMSF021J13+ TAACGTGTTGGGGTACTGGCCAGCATTGCTG-TTTTCTAACCTTAAAGACAGTGCTTCAA
rJMFF033H19+ TAACGTGTTGGGGTACTGGCCAGCATTGCTG-TTTTCTAACCTTAAAGACAGTGCTTCAA
____________________________________________________________
consensus TAACGTGTTGGGGTACTGGCCAGCATTGCTG-TTTTCTAACCTTAAAGACAGTGCTTCAA
. : . : . : . : . : . :
rJMSF034C22+ TGGTGGAGTGGGGTGGGGAGGTGGTGAACGGGGAGCCAGACGGGATGCACACCACAACTC
rJMSF019B07+ TGGTGGAGTGGGGTGGGGAGGTGGTGAACGGGGAGCCAGACGGGATGCACACCACAACTC
rJMSF044J08+ TGGTGGAGTGGGGTGGGGAGGTGGTGAACGGGGAGCCAGACGGGATGCACACCACAACTC
rJMSF021J13+ TGGTGGAGTGGGGTGGGGAGGTGGTGAACGGGGAGCCAGACGGGATGCACACCACAACTC
rJMFF033H19+ TGGTGGAGTGGGGTGGGGAGGTGGTGAACGGGGAGCCAGACGGGATGCACACCACAACTC
____________________________________________________________
consensus TGGTGGAGTGGGGTGGGGAGGTGGTGAACGGGGAGCCAGACGGGATGCACACCACAACTC
. : . : . : . : . : . :
rJMSF034C22+ AAATGGGCAGTGGGCATTTCCCCGATGAAGGATTCGGGAAGGCTAGCTACCTGAGGAACA
rJMSF019B07+ AAATGGGCAGTGGGCATTTCCCCGATGAAGGATTCGGGAAGGCTAGCTACCTGAGGAACA
rJMSF044J08+ AAATGGGCAGTGGGCATTTCCCCGATGAAGGATTCGGGAAGGCTAGCTACCTGAGGAACA
rJMSF021J13+ AAATGGGCAGTGGGCATTTCCCCGATGAAGGATTCGGGAAGGCTAGCTACCTGAGGAACA
rJMFF033H19+ AAATGGGCAGTGGGCATTTCCCCGATGAAGGATTCGGGAAGGCTAGCTACCTGAGGAACA
JMFN002C03- GGGAAGGCTAGCTACCTGAGGAACA
____________________________________________________________
consensus AAATGGGCAGTGGGCATTTCCCCGATGAAGGATTCGGGAAGGCTAGCTACCTGAGGAACA
. : . : . : . : . : . :
rJMSF034C22+ TTCAGATAGTCGACGAGTCGAACAACCTAAGGGCTCCTGAAGATCTTGGCACTTTCACCG
rJMSF019B07+ TTCAGATAGTCGACGAGTCGAACAACCTAAGGGCTCCTGAAGATCTTGGCACTTTCACCG
rJMSF044J08+ TTCAGATAGTCGACGAGTCGAACAACCTAAGGGCTCCTGAAGATCTTGGCACTTTCACCG
rJMSF021J13+ TTCAGATAGTCGACGAGTCGAACAACCTAAGGGCTCCTGAAGATCTTGGCACTTTCACCG
rJMFF033H19+ TTCAGATAGTCGACGAGTCGAACAACCTAAGGGCTCCTGAAGATCTTGGCACTTTCACCG
JMFN002C03- TTCAGATAGTCGACGAGTCGAACAACCTAAGGGCTCCTGAAGATCTTGGCACTTTCACCG
____________________________________________________________
consensus TTCAGATAGTCGACGAGTCGAACAACCTAAGGGCTCCTGAAGATCTTGGCACTTTCACCG
. : . : . : . : . : . :
rJMSF034C22+ AGAACTCCAACTGCTATGATGTGAAGCTGGGGAATAACGACAACTGGGGGAGCTATTTCT
rJMSF019B07+ AGAACTCCAACTGCTATGATGTGAAGCTGGGGAATAACGACAACTGGGGGAGCTATTTCT
rJMSF044J08+ AGAACTCCAACTGCTATGATGTGAAGCTGGGGAATAACGACAACTGGGGGAGCTATTTCT
rJMSF021J13+ AGAACTCCAACTGCTATGATGTGAAGCTGGGGAATAACGACAACTGGGGGAGCTATTTCT
rJMFF033H19+ AGAACTCCAACTGCTATGATGTGAAGCTGGGGAATAACGACAACTGGGGGAGCTATTTCT
JMFN002C03- AGAACTCCAACTGCTATGATGTGAAGCTGGGGAATAACGACAACTGGGGGAGCTATTTCT
____________________________________________________________
consensus AGAACTCCAACTGCTATGATGTGAAGCTGGGGAATAACGACAACTGGGGGAGCTATTTCT
. : . : . : . : . : . :
rJMSF034C22+ ACTTTGGAGGACCCGGGAGAAACCCGAAATGCCCATGACCAAGTTGCTCGAATTCGAAGC
rJMSF019B07+ ACTTTGGAGGACCCGGGAGAAACCCGAAATGCCCATGACCAAGTTGCTCGAATTCGAAGC
rJMSF044J08+ ACTTTGGAGGACCCGGGAGAAACCCGAAATGCCCATGACCAAGTTGCTCGAATTCGAAGC
rJMSF021J13+ ACTTTGGAGGACCCGGGAGAAACCCGAAATGCCCATGACCAAGTTGCTCGAATTCGAAGC
rJMFF033H19+ ACTTTGGAGGACCCGGGAGAAACCCGAAATGCCCATGACCAAGTTGCTCGAATTCGAAGC
JMFN002C03- ACTTTGGAGGACCCGGGAGAAACCCGAAATGCCCATGACCAAGTTGCTCGAATTCGAAGC
____________________________________________________________
consensus ACTTTGGAGGACCCGGGAGAAACCCGAAATGCCCATGACCAAGTTGCTCGAATTCGAAGC
. : . : . : . : . : . :
rJMSF034C22+ GTTTTCGTGGTTATTTCACTAGTATAGTTCTTGCAACTCGCAAAACCTTTTGTTTAGGTC
rJMFF033H20+ CGTGGTTATTTCACTAGTATAGTTCNTGCAACTCGCAAAACCTTTTGTTTAGGTC
rJMSF019B07+ GTTTTCGTGGTTATTTCACTAGTATAGTTCTTGCAACTCGCAAAACCTTTTGTTTAGGTC
rJMSF044J08+ GTTTTCGTGGTTATTTCACTAGTATAGTTCTTGCAACTCGCAAAACCTTTTGTTTAGGTC
rJMSF021J13+ GTTTTCGTGGTTATTTCACTAGTATAGTTCTTGCAACTCGCAAAACCTTTTGTTTAGGTC
rJMFF033H19+ GTTTTCGTGGTTATTTCACTAGTATAGTTCTTGCAACTCGCAAAACCTTTTGTTTAGGTC
JMFN002C03- GTTTTCGTGGTTATTTCACTAGTATAGTTCTTGCAACTCGCAAAACCTTTTGTTTAGGTC
____________________________________________________________
consensus GTTTTCGTGGTTATTTCACTAGTATAGTTCTTGCAACTCGCAAAACCTTTTGTTTAGGTC
. : . : . : . : . : . :
rJMSF034C22+ CCAGGTTTACACTAGAGTACTAATATATGAAACCGGCATCCTTGTAAAAAGTGTCCAAGA
rJMFF033H20+ CCAGGTTNACNCTANAGTANTAATATATGAAACCGGCATCCTTGTAAAAAGTGTCCAAGA
rJMSF019B07+ CCAGGTTTACACTAGAGTACTAATATATGAAACCGGCATCCTTGTAAAAAGTGTCCAAGA
rJMSF044J08+ CCAGGTTTACACTAGAGTACTAATATATGAAACCGGCATCCTTGTAAAAAGTGTCCAAGA
rJMSF021J13+ CCAGGTTTACACTAGAGTACTAATATATGAAACCGGCATCCTTGTAAAAAGTGTCCAAGA
rJMFF033H19+ CCAGGTTTACACTAGAGTACTAATATATGAAACCGGCATCCTTGTAAAAAGTGTCCAAGA
JMFN002C03- CCAGGTTTACACTAGAGTACTAATATATGAAACCGGCATCCTTGTAAAAAGTGTCCAAGA
____________________________________________________________
consensus CCAGGTTTACACTAGAGTACTAATATATGAAACCGGCATCCTTGTAAAAAGTGTCCAAGA
. : . : . : . : . : . :
rJMSF034C22+ AGGTCATAGCAGACAGAAGGGCGGAGCGGCTAAGGTTTCTCCCGGGTTGATTCTTTTATG
rJMFF033H20+ AGGTCATAGCAGACAGAAGGNCGGAGCGNCTAAGGTTTCTCCCGGGTTGATTNTTTTATG
rJMSF019B07+ AGGTCATAGCAGACAGAAGGGCGGAGCGGCTAAGGTTTCTCCCGGGTTGATTCTTTTATG
rJMSF044J08+ AGGTCATAGCAGACAGAAGGGCGGAGCGGCTAAGGTTTCTCCCGGGTTGATTCTTTTATG
rJMSF021J13+ AGGTCATAGCAGACAGAAGGGCGGAGCGGCTAAGGTTTCTCCCGGGTTGATTCTTTTATG
rJMFF033H19+ AGGTCATAGCAGACAGAAGGGCGGAGCGGCTAAGGTTTCTCCCGGGTTGATTCTTTTATG
JMFN002C03- AGGTCATAGCAGACAGAAGGGCGGAGCGGCTAAGGTTTCTCCCGGGTTGATTCTTTTATG
____________________________________________________________
consensus AGGTCATAGCAGACAGAAGGGCGGAGCGGCTAAGGTTTCTCCCGGGTTGATTCTTTTATG
. : . : . : . : . : . :
rJMSF034C22+ CGTTTGTTCGGCCTGCAACTTATTGGAACTTATCTATGCCAAAAAAGCTGTAAGTTTGCA
rJMSF019B07+ CGTTTGTTCGGCCTGCAACTTATTGGAACTTATCTATGCCAAAAAAGCTGTAAGTTTGCA
rJMSF044J08+ CGTTTGTTCGGCCTGCAACTTATTGGAACTTATCTATGCCAAAAAAGCTGTAAGTTTGCA
rJMSF021J13+ CGTTTGTTCGGCCTGCAACTTATTGGAACTTATCTATGCCAAAAAAGCTGTAAGTTTGCA
rJMFF033H19+ CGTTTGTTCGGCCTGCAACTTATTGGAACTTATCTATGCCAAAAAAGCTGTAAGTTTGCA
JMFN002C03- CGTTTGTTCGGCCTGCAACTTATTGGAACTTATCTATGCCAAAAAAGCTGTAAGTTTGCA
____________________________________________________________
consensus CGTTTGTTCGGCCTGCAACTTATTGGAACTTATCTATGCCAAAAAAGCTGTAAGTTTGCA
. : . : . : . : . : . :
rJMSF034C22+ CCTGCTATTCATGTTTAGTGTAACTATTTGGTTATATTC
rJMSF019B07+ CCTGCTATTCATGTTTAGTGTAACTATTTGGTTATATTCTTGATTGGTTC
rJMSF044J08+ CCTGCTATTCATGTTTAGTGTAACTATTTGGTTATATTCTTGATTGGTTCTGT
rJMSF021J13+ CCTGCTATTCATGTTTAGTGTAACTATTTGGTTATATTCTTGATTGGTTCTGT
rJMFF033H19+ CCTGCTATTCATGTTTAGTGTAACTATTTGGTTATATTCTTGATTGGTTCTGTTGAATAT
JMFN002C03- CCTGCTATTCATGTTTAGTGTAACTATTTGGTTATATTCTTGATTGGTTCTGTTGAATAT
____________________________________________________________
consensus CCTGCTATTCATGTTTAGTGTAACTATTTGGTTATATTCTTGATTGGTTCTGTTGAATAT
. : . : . : . : . : . :
rJMFF033H19+ TGATCAGAATA
JMFN002C03- TGATCAGAATAAACTTTTCAAGGCAAAACCTTCACAAATTCACAGGCTTTACAGTGACTG
____________________________________________________________
consensus TGATCAGAATAAACTTTTCAAGGCAAAACCTTCACAAATTCACAGGCTTTACAGTGACTG