Contig 010342:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF011M10Sequence579010342 (5)ref|XP_009605963.1|1e-58PREDICTED: BTB/POZ domain-containing protein At3g05675-like [Nicotiana tomentos763012763 (5)gb|KHG28215.1|9e-104hypothetical protein F383_15738 [Gossypium arboreum]
JMFF032H13Sequence478010342 (5)ref|XP_009605963.1|2e-39PREDICTED: BTB/POZ domain-containing protein At3g05675-like [Nicotiana tomentos588012763 (5)ref|XP_011088392.1|1e-45PREDICTED: BTB/POZ domain-containing protein At3g05675-like [Sesamum indicum]
JMFF051J12Sequence429010342 (5)ref|XP_009605963.1|9e-30PREDICTED: BTB/POZ domain-containing protein At3g05675-like [Nicotiana tomentos233012763 (5)
JMSF002H10Sequence486010342 (5)ref|XP_009605963.1|4e-46PREDICTED: BTB/POZ domain-containing protein At3g05675-like [Nicotiana tomentos749012763 (5)gb|KHG28215.1|2e-104hypothetical protein F383_15738 [Gossypium arboreum]
JMSF048E04Sequence698010342 (5)ref|XP_009605963.1|6e-77PREDICTED: BTB/POZ domain-containing protein At3g05675-like [Nicotiana tomentos761012763 (5)emb|CDO97055.1|2e-85unnamed protein product [Coffea canephora]

Alignment

This contig is upended


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JMSF048E04+                      CTCAAGGAACCGTACACAGGCCTTAATACACTCCTCAAATATCAACTTC
                      ____________________________________________________________
consensus                        CTCAAGGAACCGTACACAGGCCTTAATACACTCCTCAAATATCAACTTC
 
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JMFF011M10+                                                      TCGTCGCCGAATAGTCG
JMSF048E04+           AGAGCTACCTCAAGCAATGACAGCGCTGTTGAAACGCTATCTATCGTCGCCGAATAGTCG
                      ____________________________________________________________
consensus             AGAGCTACCTCAAGCAATGACAGCGCTGTTGAAACGCTATCTATCGTCGCCGAATAGTCG
 
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JMSF002H10+                                                                  CCGGA
JMFF011M10+           TCTGTATAGAGAAGTTGAAGAACAGTGATGTGGTCGTCGATTGATCTAGGCGTATCCGGA
JMSF048E04+           TCTGTATAGAGAAGTTGAAGAACAGTGATGTGGTCGTCGATTGATCTAGGCGTATCCGGA
                      ____________________________________________________________
consensus             TCTGTATAGAGAAGTTGAAGAACAGTGATGTGGTCGTCGATTGATCTAGGCGTATCCGGA
 
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JMSF002H10+           ACGCCGAGACTAAACCGGTGCATCTTAGATGCGCTTCCAGAATCCCCCGCAGTGTCCTTT
JMFF011M10+           ACGCCGAGACTAAACCGGTGCATCTTAGATGCGCTTCCAGAATCCCCCGCAGTGTCCTTT
JMSF048E04+           ACGCCGAGACTAAACCGGTGCATCTTAGATGCGCTTCCAGAATCCCCCGCAGTGTCCTTT
                      ____________________________________________________________
consensus             ACGCCGAGACTAAACCGGTGCATCTTAGATGCGCTTCCAGAATCCCCCGCAGTGTCCTTT
 
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JMSF002H10+           GACTCATTCAACCACCGCTCAGACAAAAGAGCCTCGAAGTACTCGCAGCGGCGAAGCACA
JMFF011M10+           GACTCATTCAACCACCGCTCAGACAAAAGAGCCTCGAAGTACTCGCAGCGGCGAAGCACA
JMSF048E04+           GACTCATTCAACCACCGCTCAGACAAAAGAGCCTCGAAGTACTCGCAGCGGCGAAGCACA
JMFF032H13+             CTCATTCAACCACCGCTCAGACAAAAGAGCCTCGAAGTACTCGCAGCGGCGAAGCACA
JMFF051J12+                                                              CGAAGCACA
                      ____________________________________________________________
consensus             GACTCATTCAACCACCGCTCAGACAAAAGAGCCTCGAAGTACTCGCAGCGGCGAAGCACA
 
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JMSF002H10+           TCGGAATGGAGATAGATCTGGACATCGGACTGGTCCAGAGAATCGACGGCTGAGATCGAC
JMFF011M10+           TCGGAATGGAGATAGATCTGGACATCGGACTGGTCCAGAGAATCGACGGCTGAGATCGAC
JMSF048E04+           TCGGAATGGAGATAGATCTGGACATCGGACTGGTCCAGAGAATCGACGGCTGAGATCGAC
JMFF032H13+           TCGGAATGGAGATAGATCTGGACATCGGACTGGTCCAGAGAATCGACGGCTGAGATCGAC
JMFF051J12+           TCGGAATGGAGATAGATCTGGACATCGGACTGGTCCAGAGAATCGACGGCTGAGATCGAC
                      ____________________________________________________________
consensus             TCGGAATGGAGATAGATCTGGACATCGGACTGGTCCAGAGAATCGACGGCTGAGATCGAC
 
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JMSF002H10+           TCGGCGTCATCGTCATCGAAGGGACAATCAACGTAGAGCCGGAGGACGGTATCAGCGGAT
JMFF011M10+           TCGGCGTCATCGTCATCGAAGGGACAATCAACGTAGAGCCGGAGGACGGTATCAGCGGAT
JMSF048E04+           TCGGCGTCATCGTCATCGAAGGGACAATCAACGTAGAGCCGGAGGACGGTATCAGCGGAT
JMFF032H13+           TCGGCGTCATCGTCATCGAAGGGACAATCAACGTAGAGCCGGAGGACGGTATCAGCGGAT
JMFF051J12+           TCGGCGTCATCGTCATCGAAGGGACAATCAACGTAGAGCCGGAGGACGGTATCAGCGGAT
                      ____________________________________________________________
consensus             TCGGCGTCATCGTCATCGAAGGGACAATCAACGTAGAGCCGGAGGACGGTATCAGCGGAT
 
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JMSF002H10+           GCCGAATCATTAAACGCGCCGCGCGAGGAGATCGGAAGATGAGAGTGAGAGGCGGTGCGC
JMFF011M10+           GCCGAATCATTAAACGCGCCGCGCGAGGAGATCGGAAGATGAGAGTGAGAGGCGGTGCGC
JMSF048E04+           GCCGAATCATTAAACGCGCCGCGCGAGGAGATCGGAAGATGAGAGTGAGAGGCGGTGCGC
JMFF032H13+           GCCGAATCATTAAACGCGCCGCGCGAGGAGATCGGAAGATGAGAGTGAGAGGCGGTGCGC
JMFF051J12+           GCCGAATCATTAAACGCGCCGCGCGAGGAGATCGGAAGATGAGAGTGAGAGGCGGTGCGC
                      ____________________________________________________________
consensus             GCCGAATCATTAAACGCGCCGCGCGAGGAGATCGGAAGATGAGAGTGAGAGGCGGTGCGC
 
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JMSF002H10+           CGAAGAGCAGATGGTTTGTGAGAACATTCGTCCAGGATTTCGTCGGGACGGGAGGAATCA
JMFF011M10+           CGAAGAGCAGATGGTTTGTGAGAACATTCGTCCAGGATTTCGTCGGGACGGGAGGAATCA
JMSF048E04+           CGAAGAGCAGATGGTTTGTGAGAACATTCGTCCAGGATTTCGTCGGGACGGGAGGAATCA
JMFF032H13+           CGAAGAGCAGATGGTTTGTGAGAACATTCGTCCAGGATTTCGTCGGGACGGGAGGAATCA
JMFF051J12+           CGAAGAGCAGATGGTTTGTGAGAACATTCGTCCAGGATTTCGTCGGGACGGGAGGAATCA
                      ____________________________________________________________
consensus             CGAAGAGCAGATGGTTTGTGAGAACATTCGTCCAGGATTTCGTCGGGACGGGAGGAATCA
 
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JMSF002H10+           ATGGCTGCGACGGTGGAGGACAGACGGTTGCTGCTTCCGGTACGTTGTCTCTTCTTCGCC
JMFF011M10+           ATGGCTGCGACGGTGGAGGACAGACGGTTGCTGCTTCCGGTACGTTGTCTCTTCTTCGCC
JMSF048E04+           ATGGCTGCGACGGTGGAGGACAGACGGTTGCTGCTTCCGGTACGTTGTCTCTTCTTCGCC
JMFF032H13+           ATGGCTGCGACGGTGGAGGACAGACGGTTGCTGCTTCCGGTACGTTGTCTCTTCTTCGCC
JMFF051J12+           ATGGCTGCGACGGTGGAGGACAGACGGTTGCTGCTTCCGGTACGTTGTCTCTTCTTCGCC
                      ____________________________________________________________
consensus             ATGGCTGCGACGGTGGAGGACAGACGGTTGCTGCTTCCGGTACGTTGTCTCTTCTTCGCC
 
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JMSF002H10+           GCAACACCGGTTGCGCCACCACCACCACCAATCTTCATTTGCGGTATCGATCGAGAATTC
JMFF011M10+           GCAACACCGGTTGCGCCACCACCACCACCAATCTTCATTTGCGGTATCGATCGAGAATTC
JMSF048E04+           GCAACACCGGTTGCGCCACCACCACCACCAATCTTCATTTGCGGTATCGATCGAGAATTC
JMFF032H13+           GCAACACCGGTTGCGCCACCACCACCACCAATCTTCATTTGCGGTATCGATCGAGAATTC
JMFF051J12+           GCAACACCGGTTGCGCCACCACCACCACCAATCTTCATTTGCGGTATCGATCGAGAATTC
                      ____________________________________________________________
consensus             GCAACACCGGTTGCGCCACCACCACCACCAATCTTCATTTGCGGTATCGATCGAGAATTC
 
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JMFF011M10+           AAGGAATGATTGAAATTGCAAT                                      
JMSF048E04+           AAGGAATGATTGAAATTGCAATACTACTTCACCGAAACAGGTTATCC             
JMFF032H13+           AAGGAATGATTGAAATTGCAATACTACTTCACCGAAACAGGTTATCCAATCTTATCTTCC
JMFF051J12+           AAGGAATGATTGAAATTGCAATACTACTTCACCGAAACAGGTTATCCAATCTTATCTTCC
                      ____________________________________________________________
consensus             AAGGAATGATTGAAATTGCAATACTACTTCACCGAAACAGGTTATCCAATCTTATCTTCC