Contig 010341:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF002B20Sequence576010341 (6)ref|XP_002285452.1|1e-95PREDICTED: pre-mRNA-processing factor 19 [Vitis vinifera] emb|CBI23714.3| unname799009748 (5)ref|XP_009594705.1|1e-114PREDICTED: U-box domain-containing protein 72-like isoform X3 [Nicotiana toment
JMFF026H01Sequence561010341 (6)ref|XP_002285452.1|5e-96PREDICTED: pre-mRNA-processing factor 19 [Vitis vinifera] emb|CBI23714.3| unname661009748 (5)ref|XP_009594705.1|4e-89PREDICTED: U-box domain-containing protein 72-like isoform X3 [Nicotiana toment
JMFF037E11Sequence578010341 (6)ref|XP_002285452.1|1e-95PREDICTED: pre-mRNA-processing factor 19 [Vitis vinifera] emb|CBI23714.3| unname674009748 (5)ref|XP_009594705.1|1e-90PREDICTED: U-box domain-containing protein 72-like isoform X3 [Nicotiana toment
JMFF051B09Sequence645010341 (6)ref|XP_002285452.1|3e-106PREDICTED: pre-mRNA-processing factor 19 [Vitis vinifera] emb|CBI23714.3| unname554022414ref|XP_009594705.1|8e-50PREDICTED: U-box domain-containing protein 72-like isoform X3 [Nicotiana toment
JMSF012P15Sequence463010341 (6)emb|CDO99306.1|8e-77unnamed protein product [Coffea canephora]714009748 (5)ref|XP_009594705.1|2e-97PREDICTED: U-box domain-containing protein 72-like isoform X3 [Nicotiana toment
JMSF042A04Sequence638010341 (6)ref|XP_002285452.1|6e-104PREDICTED: pre-mRNA-processing factor 19 [Vitis vinifera] emb|CBI23714.3| unname254009748 (5)ref|XP_009594705.1|1e-16PREDICTED: U-box domain-containing protein 72-like isoform X3 [Nicotiana toment

Alignment

This contig is upended


. : . : . : . : . : . :
JMSF042A04+ CTGTAATAATAGCTGATGAAATCCCAGGACGAATTCTCTTGCCTC
JMFF051B09+ CTGTAATAATAGCTGATGAAATCCCAGGACGAATCTTCTTGCCTC
                      ____________________________________________________________
consensus CTGTAATAATAGCTGATGAAATCCCAGGACGAATTTTCTTGCCTC
 
. : . : . : . : . : . :
JMSF042A04+ CGGGATCCATCTCCACATCTTCAGCAGCTCTTTTCCCATTGCTTAAGGTAGTAGCATTAT
JMFF002B20+ TTCAGCAGCTCTTTTCCCATTGCTTAAGGTAGTAGCATTAT
JMFF037E11+ TTCAGCAGCTCTTTTCCCATTGCTTAAGGTAGTAGCATTAT
JMFF026H01+ TTCAGCAGCTCTTTTCCCATTGCTTAAGGTAGTAGCATTAT
JMFF051B09+ CGGGATCCATCTCCACATCTTCAGCAGCTCTTTCCCCATTGCTTAAGGTAGTAGCATTAT
                      ____________________________________________________________
consensus CGGGATCCATCTCCACATCTTCAGCAGCTCTTTTCCCATTGCTTAAGGTAGTAGCATTAT
 
. : . : . : . : . : . :
JMSF042A04+ CGGCACTTTCCATGGCTGCTGCACTGGGTAGTTGTCTGTCAGCCTGGGCAAGCAATTCCC
JMFF002B20+ CGGCACTTTCCATGGCTGCTGCACTGGGTAGTTGTCTGTCAGCCTGGGCAAGCAATTCCC
JMFF037E11+ CGGCACTTTCCATGGCTGCTGCACTGGGTAGTTGTCTGTCAGCCTGGGCAAGCAATTCCC
JMFF026H01+ CGGCACTTTCCATGGCTGCTGCACTGGGTAGTTGTCTGTCAGCCTGGGCAAGCAATTCCC
JMFF051B09+ CGGCACTTTCCATGGCTGCTGCACTGGGTAGTTGTCTGTCAGCCTGGGCAAGCAATTCCC
                      ____________________________________________________________
consensus CGGCACTTTCCATGGCTGCTGCACTGGGTAGTTGTCTGTCAGCCTGGGCAAGCAATTCCC
 
. : . : . : . : . : . :
JMSF042A04+ TTGCCTCATCCCTTTCCTTCTTCAACCTTGCAATCACACGGCAAGCAG---CATGCTGGT
JMFF002B20+ TTGCCTCATCCCTTTCCTTCTTCAACCTTGCAATCACACGGCAAGCAGCATCATGCTGGT
JMFF037E11+ TTGCCTCATCCCTTTCCTTCTTCAACCTTGCAATCACACGGCAAGCAGCATCATGCTGGT
JMFF026H01+ TTGCCTCATCCCTTTCCTTCTTCAACCTTGCAATCACACGGCAAGCAGCATCATGCTGGT
JMSF012P15+ TTCTTCAACCTTGCAATCACACGGCAAGCAGCATCATGCTGGT
JMFF051B09+ TTGCCTCATCCCTTTCCTTCTTCAACCTTGCAATCACACGGCAAGCAGCATCATGCTGGT
                      ____________________________________________________________
consensus TTGCCTCATCCCTTTCCTTCTTCAACCTTGCAATCACACGGCAAGCAGCATCATGCTGGT
 
. : . : . : . : . : . :
JMSF042A04+ AGAGTGCATGGCTTAACTCTTGTCTTGCAGTATGTAATTGTTGCTCCAGTGCAAAATTTG
JMFF002B20+ AGAGTGCATGGCTTAACTCTTGTCTTGCAGTATGTAATTGTTGCTCCAGTGCAAAATTTG
JMFF037E11+ AGAGTGCATGGCTTAACTCTTGTCTTGCAGTATGTAATTGTTGCTCCAGTGCAAAATTTG
JMFF026H01+ AGAGTGCATGGCTTAACTCTTGTCTTGCAGTATGTAATTGTTGCTCCAGTGCAAAATTTG
JMSF012P15+ AGAGTGCATGGCTTAACTCTTGTCTTGCAGTATGTAATTGTTGCTCCAGTGCAAAATTTG
JMFF051B09+ AGAGTGCATGGCTTAACTCTTGTCTTGCAGTATGTAATTGTTGCTCCAGTGCAAAATTTG
                      ____________________________________________________________
consensus AGAGTGCATGGCTTAACTCTTGTCTTGCAGTATGTAATTGTTGCTCCAGTGCAAAATTTG
 
. : . : . : . : . : . :
JMSF042A04+ ATAGCATCAAACTATCCCATTCAATCTGAAACATTCCCAACATCCCAGGAATACTTGCAG
JMFF002B20+ ATAGCATCAAACTATCCCATTCAATCTGAAACATTCCCAACATCCCAGGAATACTTGCAG
JMFF037E11+ ATAGCATCAAACTATCCCATTCAATCTGAAACATTCCCAACATCCCAGGAATACTTGCAG
JMFF026H01+ ATAGCATCAAACTATCCCATTCAATCTGAAACATTCCCAACATCCCAGGAATACTTGCAG
JMSF012P15+ ATAGCATCAAACTATCCCATTCAATCTGAAACATTCCCAACATCCCAGGAATACTTGCAG
JMFF051B09+ ATAGCATCAAACTATCCCATTCAATCTGAAACATTCCCAACATCCCAGGAATACTTGCAG
                      ____________________________________________________________
consensus ATAGCATCAAACTATCCCATTCAATCTGAAACATTCCCAACATCCCAGGAATACTTGCAG
 
. : . : . : . : . : . :
JMSF042A04+ CCTGTACAGGTCGGGGTTTCACGATCTTTCCTGTTTTGATTGGGACAATATCATCCATTG
JMFF002B20+ CCTGTACAGGTCGGGGTTTCACGATCTTTCCTGTTTTGATTGGGACAATATCATCCATTG
JMFF037E11+ CCTGTACAGGTCGGGGTTTCACGATCTTTCCTGTTTTGATTGGGACAATATCATCCATTG
JMFF026H01+ CCTGTACAGGTCGGGGTTTCACGATCTTTCCTGTTTTGATTGGGACAATATCATCCATTG
JMSF012P15+ CCTGTACAGGTCGGGGTTTCACGATCTTTCCTGTTTTGATTGGGACAATATCATCCATTG
JMFF051B09+ CCTGTACAGGTCGGGGTTTCACGATCTTTCCTGTTTTGATTGGGACAATATCATCCATTG
                      ____________________________________________________________
consensus CCTGTACAGGTCGGGGTTTCACGATCTTTCCTGTTTTGATTGGGACAATATCATCCATTG
 
. : . : . : . : . : . :
JMSF042A04+ TCAGAGGCTCTCCAGTAACTGGACATTTACCATAATCCGAGATGTGTCGTTCAATTAAAC
JMFF002B20+ TCAGAGGCTCTCCAGTAACTGGACATTTACCATAATCCGAGATGTGTCGTTCAATTAAAC
JMFF037E11+ TCAGAGGCTCTCCAGTAACTGGACATTTACCATAATCCGAGATGTGTCGTTCAATTAAAC
JMFF026H01+ TCAGAGGCTCTCCAGTAACTGGACATTTACCATAATCCGAGATGTGTCGTTCAATTAAAC
JMSF012P15+ TCAGAGGCTCTCCAGTAACTGGACATTTACCATAATCCGAGATGTGTCGTTCAATTAAAC
JMFF051B09+ TCAGAGGCTCTCCAGTAACTGGACATTTACCATAATCCGAGATGTGTCGTTCAATTAAAC
                      ____________________________________________________________
consensus TCAGAGGCTCTCCAGTAACTGGACATTTACCATAATCCGAGATGTGTCGTTCAATTAAAC
 
. : . : . : . : . : . :
JMSF042A04+ GCTTCTCGAAGAGCAAACCGGACTTCGTGGAGACAACCGGCTCCTCCGGCACCTCGCCAG
JMFF002B20+ GCTTCTCGAAGAGCAAACCGGACTTCGTGGAGACAACCGGCTCCTCCGGCACCTCGCCAG
JMFF037E11+ GCTTCTCGAAGAGCAAACCGGACTTCGTGGAGACAACCGGCTCCTCCGGCACCTCGCCAG
JMFF026H01+ GCTTCTCGAAGAGCAAACCGGACTTCGTGGAGACAACCGGCTCCTCCGGCACCTCGCCAG
JMSF012P15+ GCTTCTCGAAGAGCAAACCGGACTTCGTGGAGACAACCGGCTCCTCCGGCACCTCGCCAG
JMFF051B09+ GCTTCTCGAAGAGCAAACCGGACTTCGTGGAGACAACCGGCTCCTCCGGCACCTCGCCAG
                      ____________________________________________________________
consensus GCTTCTCGAAGAGCAAACCGGACTTCGTGGAGACAACCGGCTCCTCCGGCACCTCGCCAG
 
. : . : . : . : . : . :
JMSF042A04+ AAATTGAGCAGTTCATTGTAGAGAGAGATGTGAGAGAGCTAAGATTTCAGCTCAGAGCAA
JMFF002B20+ AAATTGAGCAGTTCATTGTAGAGAGAGATGTGAGAGAGCTAAGATTTCAGCTCAGAGCAA
JMFF037E11+ AAATTGAGCAGTTCATTGTAGAGAGAGATGTGAGAGAGCTAAGATTTCAGCTCAGAGCAA
JMFF026H01+ AAATTGAGCAGTTCATTGTAGAGAGAGATGTGAGAGAGCTAAGATTTCAGCTCAGAGCAA
JMSF012P15+ AAATTGAGCAGTTCATTGTAGAGAGAGATGTGAGAGAGCTAAGATTTCAGCTCAGAGCAA
JMFF051B09+ AAATTGAGCAGTTCATTGTAGAGAGAGATGTGAGAGAGCTAAGATTTCAGCTCAGAGCAA
                      ____________________________________________________________
consensus AAATTGAGCAGTTCATTGTAGAGAGAGATGTGAGAGAGCTAAGATTTCAGCTCAGAGCAA
 
. : . : . : . : . : . :
JMSF042A04+ GCTTTCCTNTTCTTCCCTGCTGCTCGGAAGTGGAAGCGCCGACGGGAAAGATAGC
JMFF002B20+ GCTTTCCTCTTCTTCCCTGCTGCTCGGAAGTGGAAGCGCCGACGGGAAAGA
JMFF037E11+ GCTTTCCTCTTCTTCCCTGCTGCTCGGAAGTGGAAGCGCCGACGGGAAAGATAGC
JMFF026H01+ GCTTTCCTCTTCTTCCCTGCTGCTCGGAAGTGGAAGCGCC
JMSF012P15+ GCTTTCCTCTTCTTCCCTGCTGCTCGGAAGTGGAAGCGCCGACGGGAAAGATAGC
JMFF051B09+ GCTTTCCTCTTCTTCCCTGCTGCTCGGAAGTGGAAGCGCCGACGGGAAAGATAGCGGGGC
                      ____________________________________________________________
consensus GCTTTCCTCTTCTTCCCTGCTGCTCGGAAGTGGAAGCGCCGACGGGAAAGATAGCGGGGC