Contig 010328:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF049F24Sequence643010328 (2)ref|XP_009598864.1|3e-105PREDICTED: ATP synthase subunit d, mitochondrial-like [Nicotiana tomentosiformi597010328 (2)ref|XP_009598864.1|5e-70PREDICTED: ATP synthase subunit d, mitochondrial-like [Nicotiana tomentosiformi

Alignment

This contig is upended


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rJMFF049F24-                                ACCCTGGAGAGTTTTTTTTTTTTTTTTGATCTAATATT
                      ____________________________________________________________
consensus                                   ACCCTGGAGAGTTTTTTTTTTTTTTTTGATCTAATATT
 
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rJMFF049F24-          CCATTTTTAACTGGAAAATATTTGGTTCCTTAAGCGAAAGTATGCAATGACACCTCAAAA
                      ____________________________________________________________
consensus             CCATTTTTAACTGGAAAATATTTGGTTCCTTAAGCGAAAGTATGCAATGACACCTCAAAA
 
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rJMFF049F24-          ATATGTAATCTATTTGACATTCTTCAACTCAACCCGTAGATGGAACGGGGAACCAATTAA
                      ____________________________________________________________
consensus             ATATGTAATCTATTTGACATTCTTCAACTCAACCCGTAGATGGAACGGGGAACCAATTAA
 
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rJMFF049F24-          TTCTCTTTTATTTCTAAACCAATGATGAACGAAATAAAAGTCCACCAAGGCAATAAAGCA
                      ____________________________________________________________
consensus             TTCTCTTTTATTTCTAAACCAATGATGAACGAAATAAAAGTCCACCAAGGCAATAAAGCA
 
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rJMFF049F24-          GGCAGCTACATCAAGTCAACTAGTAACCCCAGTAATCATTACGAATTTCATCATCGAACT
JMFF049F24+                             ACTAGTAACCCCAGTAATCATTACGAATTTCATCATCGAACT
                      ____________________________________________________________
consensus             GGCAGCTACATCAAGTCAACTAGTAACCCCAGTAATCATTACGAATTTCATCATCGAACT
 
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rJMFF049F24-          TCTTCTTTAACTCTGGATGCTTAGCAAAGTATTCTTCTGCTGTCATAGTACTGAGTTTTT
JMFF049F24+           TCTTCTTTAACTCTGGATGCTTAGCAAAGTATTCTTCTGCTGTCATAGTACTGAGTTTTT
                      ____________________________________________________________
consensus             TCTTCTTTAACTCTGGATGCTTAGCAAAGTATTCTTCTGCTGTCATAGTACTGAGTTTTT
 
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rJMFF049F24-          TCTTCAACTCTTGGACATCTGCAACTTCTTTTTCTAGTCTTGCAGACTCCTTGAGAGATT
JMFF049F24+           TCTTCAACTCTTGGACATCTGCAACTTCTTTTTCTAGTCTTGCAGACTCCTTGAGAGATT
                      ____________________________________________________________
consensus             TCTTCAACTCTTGGACATCTGCAACTTCTTTTTCTAGTCTTGCAGACTCCTTGAGAGATT
 
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rJMFF049F24-          TCTGCTCAGCTTCTTTCAGCTCTACCACCAGGGCATCAAACTTGGGCATATATTGGGGAG
JMFF049F24+           TCTGCTCAGCTTCTTTCAGCTCTACCACCAGGGCATCAAACTTGGGCATATATTGGGGAG
                      ____________________________________________________________
consensus             TCTGCTCAGCTTCTTTCAGCTCTACCACCAGGGCATCAAACTTGGGCATATATTGGGGAG
 
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rJMFF049F24-          TGACAGTGTCCACGTATTTAGGGATTTCAATACTCTCATATGCCTGCTTGTACATATCCA
JMFF049F24+           TGACAGTGTCCACGTATTTAGGGATTTCAATACTCTCATATGCCTGCTTGTACATATCCA
                      ____________________________________________________________
consensus             TGACAGTGTCCACGTATTTAGGGATTTCAATACTCTCATATGCCTGCTTGTACATATCCA
 
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rJMFF049F24-          CCAAGCGAGAACCAAGTCCTTTTCTGTAATATTCCCAATCTATGGGTTCAGGTTCCTGGC
JMFF049F24+           CCAAGCGAGAACCAAGTCCTTTTCTGTAATATTCCCAATCTATGGGTTCAGGTTCCTGGC
                      ____________________________________________________________
consensus             CCAAGCGAGAACCAAGTCCTTTTCTGTAATATTCCCAATCTATGGGTTCAGGTTCCTGGC
 
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rJMFF049F24-          TAAACTTGGT                                                  
JMFF049F24+           TAAACTTGGTCTGAAGCTGGGAATTGACCTCGTCGAAGGCGCGGCGGAGGGAAGCGAACT
                      ____________________________________________________________
consensus             TAAACTTGGTCTGAAGCTGGGAATTGACCTCGTCGAAGGCGCGGCGGAGGGAAGCGAACT
 
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JMFF049F24+           CCTTCCGAGCCTCATCGGAGACGAGAAGCCTCGCCATTCCTTCCCAATCGATTGTCTTGC
                      ____________________________________________________________
consensus             CCTTCCGAGCCTCATCGGAGACGAGAAGCCTCGCCATTCCTTCCCAATCGATTGTCTTGC
 
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JMFF049F24+           CGGCCTTGAACGTAACGTCGGCAACTTTCTTCGCTGTTCCGCTCATTTTCTCGATCAAAT
                      ____________________________________________________________
consensus             CGGCCTTGAACGTAACGTCGGCAACTTTCTTCGCTGTTCCGCTCATTTTCTCGATCAAAT
 
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JMFF049F24+           TTGGGGTGGACGGGCGACTACTGAGCAGAAACCCAACGCAATGCAAAATCCCTCTCCCTT
                      ____________________________________________________________
consensus             TTGGGGTGGACGGGCGACTACTGAGCAGAAACCCAACGCAATGCAAAATCCCTCTCCCTT