| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF041C12 | Sequence | 623 | 010327 (6) | ref|XP_006467243.1| | 2e-62 | PREDICTED: protein PHR1-LIKE 1-like isoform X1 [Citrus sinensis] | 582 | 010327 (6) | ref|XP_011095855.1| | 7e-35 | PREDICTED: myb family transcription factor APL-like [Sesamum indicum] ref|XP_01 |
| JMFF049C13 | Sequence | 512 | 010327 (6) | ref|XP_007026438.1| | 3e-23 | Myb-like HTH transcriptional regulator family protein [Theobroma cacao] gb|EOY2 | 296 | 004153 (2) | |||
| JMSF018L16 | Sequence | 506 | 010327 (6) | ref|XP_006449962.1| | 9e-50 | hypothetical protein CICLE_v10015893mg [Citrus clementina] gb|ESR63202.1| hypoth | 790 | 010327 (6) | ref|XP_011095855.1| | 3e-68 | PREDICTED: myb family transcription factor APL-like [Sesamum indicum] ref|XP_01 |
| JMSF021L22 | Sequence | 667 | 010327 (6) | ref|XP_010647088.1| | 4e-40 | PREDICTED: protein PHR1-LIKE 1-like isoform X2 [Vitis vinifera] | 769 | 004153 (2) | ref|XP_009374806.1| | 4e-29 | PREDICTED: myb family transcription factor APL isoform X1 [Pyrus x bretschneide |
This contig is upended
. : . : . : . : . : . :
rJMFF041C12- CTTTTTTTTTTTTTTTTTAAAACA
____________________________________________________________
consensus CTTTTTTTTTTTTTTTTTAAAACA
. : . : . : . : . : . :
rJMFF041C12- AGAGTTTAAACATACTGCATTTTAAACCAAGAGGTTTCAGTGGCCTAATAGAAATACATA
rJMSF018L16- AACATACTGCATTTTAAACCAAGAGGTTTCAGTGGCCTAATAGAAATACATA
____________________________________________________________
consensus AGAGTTTAAACATACTGCATTTTAAACCAAGAGGTTTCAGTGGCCTAATAGAAATACATA
. : . : . : . : . : . :
rJMFF041C12- TGTTTTACAGGGATGAAGGTGTTACACAGCTACACTGCCATAGGGCATTAAATAACACTA
rJMSF018L16- TGTTTTACAGGGATGAAGGTGTTACACAGCTACACTGCCATAGGGCATTAAATAACACTA
____________________________________________________________
consensus TGTTTTACAGGGATGAAGGTGTTACACAGCTACACTGCCATAGGGCATTAAATAACACTA
. : . : . : . : . : . :
rJMFF041C12- CATATTGCCACTGCAGATTTTCTCCCTCGGGTCTTCATTACCGATAGATAGTCCCGACGA
rJMSF018L16- CATATTGCCACTGCAGATTTTCTCCCTCGGGTCTTCATTACCGATAGATAGTCCCGACGA
____________________________________________________________
consensus CATATTGCCACTGCAGATTTTCTCCCTCGGGTCTTCATTACCGATAGATAGTCCCGACGA
. : . : . : . : . : . :
rJMFF041C12- ATGGCTGAGATGCTCTCTTGTCAGGAAAACTGTATCTGGCTGCTGGTATGAGGGGGGGCT
rJMSF018L16- ATGGCTGAGATGCTCTCTTGTCAGGAAAACTGTATCTGGCTGCTGGTATGAGGGGGGGCT
____________________________________________________________
consensus ATGGCTGAGATGCTCTCTTGTCAGGAAAACTGTATCTGGCTGCTGGTATGAGGGGGGGCT
. : . : . : . : . : . :
rJMFF041C12- CAAGCTTGATTCCAATATTGGATGAGTGAGCATCACATTGGGTTTGGCGAGTGCAGCGCC
rJMSF018L16- CAAGCTTGATTCCAATATTGGATGAGTGAGCATCACATTGGGTTTGGCGAGTGCAGCGCC
____________________________________________________________
consensus CAAGCTTGATTCCAATATTGGATGAGTGAGCATCACATTGGGTTTGGCGAGTGCAGCGCC
. : . : . : . : . : . :
rJMFF041C12- CGAATCTAGCTTCTGCATTTTGGAAGGCCTCTCGCCTGTAGGGGATTCTATTTGAGAGGT
rJMSF018L16- CGAATCTAGCTTCTGCATTTTGGAAGGCCTCTCGCCTGTAGGGGATTCTATTTGAGAGGT
____________________________________________________________
consensus CGAATCTAGCTTCTGCATTTTGGAAGGCCTCTCGCCTGTAGGGGATTCTATTTGAGAGGT
. : . : . : . : . : . :
rJMFF041C12- CTCGTGGCCACCAAAATCGGGGGTGAGAGGTTCGTGATGAGAAGAGAATGACTCATCGAG
rJMSF018L16- CTCGTGGCCACCAGAATCGGGGGTGAGAGGTTCGTGATGAGAAGAGAATGACTCATCGAG
____________________________________________________________
consensus CTCGTGGCCACCAGAATCGGGGGTGAGAGGTTCGTGATGAGAAGAGAATGACTCATCGAG
. : . : . : . : . : . :
rJMFF041C12- GGAATGGCTCTTGGCTGGTGCACGCTCCTTTGCATGCTTGTCGCCGTGAGGAGACTCGGA
rJMSF018L16- GGAATGGCTCTTGGCTGGTGCACGCTCCTTTGCATGCTTGTCGCCGTGAGGAGACTCGGA
____________________________________________________________
consensus GGAATGGCTCTTGGCTGGTGCACGCTCCTTTGCATGCTTGTCGCCGTGAGGAGACTCGGA
. : . : . : . : . : . :
rJMFF041C12- TGTAGGCGCGGGAGTTGATGGAGGATCAGTCGCATTGATAGATTCGGGGCCATGCTCACC
rJMSF018L16- TGTAGGCGCGGGAGTTGATGGAGGATCAGTCGCATTGATAGATTCGGGGCCATGCTCACC
____________________________________________________________
consensus TGTAGGCGCGGGAGTTGATGGAGGATCAGTCGCATTGATAGATTCGGGGCCATGCTCACC
. : . : . : . : . : . :
rJMFF041C12- TGCCGCTGGATTCACCCC
rJMSF018L16- TGCCGCTGGATTCACCCCGCTTCCCGGGGCTTCCGTAAGCACCCCACTCAGTCGCTGTTG
____________________________________________________________
consensus TGCCGCTGGATTCACCCCGCTTCCCGGGGCTTCCGTAAGCACCCCACTCAGTCGCTGTTG
. : . : . : . : . : . :
rJMSF018L16- TTCTTCGATTATCTTCTTCAAATACTTCCCTTGAGCTTCTATTCTCAGTTGTAGCTGGCG
____________________________________________________________
consensus TTCTTCGATTATCTTCTTCAAATACTTCCCTTGAGCTTCTATTCTCAGTTGTAGCTGGCG
. : . : . : . : . : . :
rJMSF018L16- CTGAACCTCTAGTTGCTCATGTAGTCGCTTTTGCACCTCCATCTGCAGCTTTAATGCCTC
JMFF041C12+ ACCTCTAGTTGCTCATGTAGTCGCTTNTGCACCTCCATCTGCAGCTTTAATGCCTC
____________________________________________________________
consensus CTGAACCTCTAGTTGCTCATGTAGTCGCTTTTGCACCTCCATCTGCAGCTTTAATGCCTC
. : . : . : . : . : . :
rJMSF018L16- AGTGATTTGCATTCCAGATGA
JMSF018L16+ AGATGAGCCATCCAAATTTGAGATCATATCCCTCGACTCTTTCTT
JMFF041C12+ AGTGATTTGCATTCCAGATGAGCCATCCAAATTTGAGATCATATCCCTCGACTCTTTCTT
____________________________________________________________
consensus AGTGATTTGCATTCCAGATGAGCCATCCAAATTTGAGATCATATCCCTCGACTCTTTCTT
. : . : . : . : . : . :
JMSF018L16+ GTCAGC-TTTTTCCCATCGGAAGAGGAATCAGGAAGGTATTTGGCAAGTCGATATTTCTG
JMFF041C12+ GTCAGCTTTTTTCCCATCGGAAGAGGAATCAGGAAGGTATTTGGCAAGTCGATATTTCTG
____________________________________________________________
consensus GTCAGCTTTTTTCCCATCGGAAGAGGAATCAGGAAGGTATTTGGCAAGTCGATATTTCTG
. : . : . : . : . : . :
JMSF018L16+ CAAATGGCTCTTTACGTGATAAATTGTAAGCCCTTGCACACCCATGACTCTCAAGACACC
JMFF041C12+ CAAATGGCTCTTTACGTGATAAATTGTAAGCCCTTGCACACCCATGACTCTCAAGACACC
JMSF021L22+ AAATGGCTTTTTACATGATAAATTGTCAGCCCTTGCACACCCATGAGTCTCAAAACACC
JMFF049C13+ AGCCCTTGCACACCCATGAGTCTCAAAACACC
____________________________________________________________
consensus CAAATGGCTCTTTACGTGATAAATTGTAAGCCCTTGCACACCCATGAGTCTCAAGACACC
. : . : . : . : . : . :
JMSF018L16+ TTTCGGTGTAGCCCGATCGGGGCCACCGAGTTGTGCCACTGCATCAAC-AAATCGCTCAT
JMFF041C12+ TTTCGGTGTAGCCCGATCGGGGCCACCGAGTTGTGCCACTGCATCAAC-AAATCGCTCAT
JMSF021L22+ TTTAGGAGTAGCCCTATCTGGGCCACCAAGTTGTGCAACTGAATCAAC-AAATCTTTCAT
JMFF049C13+ TTTAGGAGTAGCCCTATCTGGGGCACCAAGTTGTGCAACTGAATCAACAAAATCTTTCAT
____________________________________________________________
consensus TTTCGGTGTAGCCCTATCTGGGCCACCGAGTTGTGCCACTGCATCAAC-AAATCTTTCAT
. : . : . : . : . : . :
JMSF018L16+ GAAGTTCATTTGTCCAACGGAGACGTTGTTTTGAAGCGAGACTTGGATTGTTGTTGAGGT
JMFF041C12+ GAAGTTCATTTGTCCAACGGAGACGTTGTTTTGAAGCGAGACTTGGATTGTTGTTGAGGT
JMSF021L22+ GAAGCTCATGTGACCAACGCAGACGTTGTTTTGAAGCAAGACTAGGATTGTTGTTGAGAT
JMFF049C13+ GAAGCTCATGTGACCAACGCAGACGTTGTTTTGAAGCAAGACTAGGATTGTTGTTGAGAT
____________________________________________________________
consensus GAAGTTCATTTGTCCAACGGAGACGTTGTTTTGAAGCGAGACTTGGATTGTTGTTGAGGT
. : . : . : . : . : . :
JMSF018L16+ TATTACCCCCACTGATTGGATCCATTGTGCTGG
JMFF041C12+ TATTACCCCCACTGATTGGATCCATTGTGCTGG
JMSF021L22+ TGTTATCCCCATTGATTGGTTCCATTGTGCTGGCACTAAAGTCTAATGTCTGCTGGCTGA
JMFF049C13+ TGTTATCCCCATTGATTGGTTCCATTGTGCTGGCACTAAAGTCTAATGTCTGCTGGCTGA
____________________________________________________________
consensus TGTTATCCCCATTGATTGGTTCCATTGTGCTGGCACTAAAGTCTAATGTCTGCTGGCTGA
. : . : . : . : . : . :
JMSF021L22+ CTATTGCCTTGTTGGGTACTAAGCTTGAACTAAGAACAGCTTTCGGTTGGTACATTACAT
JMFF049C13+ CTATTGCCTTGTTGGGTACTAAGCTTGAACTAAGAACAGCTTTCGGTTGGTACATTACAT
____________________________________________________________
consensus CTATTGCCTTGTTGGGTACTAAGCTTGAACTAAGAACAGCTTTCGGTTGGTACATTACAT
. : . : . : . : . : . :
JMSF021L22+ TAAGCGCCCAAATAAGAGGTTGAACAGTGCTTCCTCTCCTCCTCCTCTGTCTTTGACGGC
JMFF049C13+ TAAGCGCCCAAATAAGAGGTTGAACAGTGCTTCCTCTCCTCCTCCTCTGTCTTTGA-GGC
____________________________________________________________
consensus TAAGCGCCCAAATAAGAGGTTGAACAGTGCTTCCTCTCCTCCTCCTCTGTCTTTGACGGC
. : . : . : . : . : . :
JMSF021L22+ GATCTCCGATCCTTCTCTCTCTGTGCTTTGACTTATAGAGAAAGGACGTAGACAAAGATG
JMFF049C13+ GATCTCCGATCCTTCTCTCTCTGTGCTTTGACTTATAGAGAAAGGACGTAGACAAAGATG
____________________________________________________________
consensus GATCTCCGATCCTTCTCTCTCTGTGCTTTGACTTATAGAGAAAGGACGTAGACAAAGATG
. : . : . : . : . : . :
JMSF021L22+ AAAGTCGGAGATATGAATTTAAAATCCGCGGCGATTACGTAAGGCGGCTGCCGAAGCTGA
JMFF049C13+ AAAGTCGGAGATATGAATTTAAAATCCGCGGCGATTACGTAAGGCGGCTGCCGAAGCTGA
____________________________________________________________
consensus AAAGTCGGAGATATGAATTTAAAATCCGCGGCGATTACGTAAGGCGGCTGCCGAAGCTGA
. : . : . : . : . : . :
JMSF021L22+ GGTGAGGCGGAGTAGGAAGAGATCAGAGATGAGATGATTGTTCAGCCGGCG
JMFF049C13+ GGTGAGGCGGAGTAGGAAGAGATCAGAGATGAGATGATTGTTCAGCCGGCGGTTCACAAT
____________________________________________________________
consensus GGTGAGGCGGAGTAGGAAGAGATCAGAGATGAGATGATTGTTCAGCCGGCGGTTCACAAT