Contig 010325:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF038P19Sequence435010325 (3)ref|XP_009761391.1|9e-67PREDICTED: acyl-coenzyme A thioesterase 9, mitochondrial isoform X2 [Nicotiana 721011130 (3)gb|EYU46078.1|5e-92hypothetical protein MIMGU_mgv1a006555mg [Erythranthe guttata]
JMFF048K23Sequence555010325 (3)gb|EYU46078.1|2e-77hypothetical protein MIMGU_mgv1a006555mg [Erythranthe guttata]461011130 (3)ref|XP_009761392.1|6e-27PREDICTED: uncharacterized protein LOC104213559 isoform X3 [Nicotiana sylvestri
JMSF005E18Sequence414010325 (3)ref|XP_009761392.1|1e-48PREDICTED: uncharacterized protein LOC104213559 isoform X3 [Nicotiana sylvestri

Alignment

This contig is upended


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JMFF048K23+                                                        ATCAACAGAAGCGGT
                      ____________________________________________________________
consensus                                                          ATCAACAGAAGCGGT
 
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JMFF038P19+                                                 AACAATGTTTGACTGAAATGGT
JMFF048K23+           CACCAAATACAGGGGTCTGGTCGTGCTATCTTCATCCGAACAATGTTTGACTGAAATGGT
                      ____________________________________________________________
consensus             CACCAAATACAGGGGTCTGGTCGTGCTATCTTCATCCGAACAATGTTTGACTGAAATGGT
 
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JMFF038P19+           TCCAGCAAGGGCATCAAGATCCTCAAGCAACTTCCCAATTCTAACCTCATTCCCAGGATC
JMSF005E18+                                                         TCATTCCCAGGATC
JMFF048K23+           TCCAGCAAGGGCATCAAGATCCTCAAGCAACTTCCCAATTCTAACCTCATTCCCAGGATC
                      ____________________________________________________________
consensus             TCCAGCAAGGGCATCAAGATCCTCAAGCAACTTCCCAATTCTAACCTCATTCCCAGGATC
 
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JMFF038P19+           CCTATACTGCTCTCTCAAAATATAATCAGTGGAGAAGTTATAAAGAATGGTAGTTCTGCT
JMSF005E18+           CCTATACTGCTCTCTCAAAATATAATCAGTGGAGAAGTTATAAAGAATGGTAGTTCTGCT
JMFF048K23+           CCTATACTGCTCTCTCAAAATATAATCAGTGGAGAAGTTATAAAGAATGGTAGTTCTGCT
                      ____________________________________________________________
consensus             CCTATACTGCTCTCTCAAAATATAATCAGTGGAGAAGTTATAAAGAATGGTAGTTCTGCT
 
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JMFF038P19+           CTGGGACGGCGTCTTGGTGAGCAATTCACTCTGAGGCGGTGCATCCAGCGGCGGATCAAG
JMSF005E18+           CTGGGACGGCGTCTTGGTGAGCAATTCACTCTGAGGCGGTGCATCCAGCGGCGGATCAAG
JMFF048K23+           CTGGGACGGCGTCTTGGTGAGCAATTCACTCTGAGGCGGTGCATCCAGCGGCGGATCAAG
                      ____________________________________________________________
consensus             CTGGGACGGCGTCTTGGTGAGCAATTCACTCTGAGGCGGTGCATCCAGCGGCGGATCAAG
 
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JMFF038P19+           AAGCCTTTCAAAAATCTTAGACCTTGTTTCCCAGAGAGCATTGGTTACCGGAGAATGGTA
JMSF005E18+           AAGCCTTTCAAAAATCTTAGACCTTGTTTCCCAGAGAGCATTGGTTACCGGAGAATGGTA
JMFF048K23+           AAGCCTTTCAAAGTTCTTAGACCTTGTTTCCCAGAGAGCATTGGTTACCGGAGAATGGTA
                      ____________________________________________________________
consensus             AAGCCTTTCAAAAATCTTAGACCTTGTTTCCCAGAGAGCATTGGTTACCGGAGAATGGTA
 
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JMFF038P19+           CATCCCTGGCCACAAACTCAGCTGCTTTCTGCTCGAATCATTTGCATCCGGTGAGCTCTC
JMSF005E18+           CATCCCTGGCCACAAACTCAGCTGCTTTCTGCTCGAATCATTTGCATCCGGTGAGCTCTC
JMFF048K23+           CATCCCTGGCCACAAACTCAGCTGCTTTCTGCTCGAATCATTTGCATCCGGTGAGCTCTC
                      ____________________________________________________________
consensus             CATCCCTGGCCACAAACTCAGCTGCTTTCTGCTCGAATCATTTGCATCCGGTGAGCTCTC
 
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JMFF038P19+           GAAGGGAGAACCCAAAGTGGATACGATTGGAATAACTTTTGAAGGAGAGGAATTGGGATC
JMSF005E18+           GAAGGGAGAACCCAAAGTGGATACGATTGGAATAACTTTTGAAGGAGAGGAATTGGGATC
JMFF048K23+           GAAGGGAGAACCCAAAGTGGATACGATTGGAATAACTTTTGAAGGAGAGGAATTGGGATC
                      ____________________________________________________________
consensus             GAAGGGAGAACCCAAAGTGGATACGATTGGAATAACTTTTGAAGGAGAGGAATTGGGATC
 
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JMFF038P19+           CATCAAATTACACGAATTCTTGGGTTTGTTTTGGTTTGTTTATGACAAAATAT       
JMSF005E18+           CATCAAATTACACGAATTCTTGGGTTTGTTTTGGTTTGTTTATGACAAAATATGGCCGGC
JMFF048K23+           CATCAAATTACACGAATTCTTGGGTTTGTTTTGGTTTGTTTATGACAAAATATGGCCGGC
                      ____________________________________________________________
consensus             CATCAAATTACACGAATTCTTGGGTTTGTTTTGGTTTGTTTATGACAAAATATGGCCGGC
 
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JMSF005E18+           CTTTCTTTAATGGGGTTGGAGCTTGGAAGCCTAGCAGT                      
JMFF048K23+           CTTTCTTTAATGGGGTTGGAGCTTGGAAGCCTAGCAGTTGGGAAGATGGTAGCTGATGCA
                      ____________________________________________________________
consensus             CTTTCTTTAATGGGGTTGGAGCTTGGAAGCCTAGCAGTTGGGAAGATGGTAGCTGATGCA