Contig 010319:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF047H18Sequence602010319 (3)ref|XP_009777886.1|4e-12PREDICTED: probable plastidic glucose transporter 3 [Nicotiana sylvestris] ref|588001220 (3)
JMSF004D17Sequence356010319 (3)ref|XP_009777886.1|9e-25PREDICTED: probable plastidic glucose transporter 3 [Nicotiana sylvestris] ref|281012538 (3)ref|XP_006349909.1|7e-32PREDICTED: apyrase 2 isoform X1 [Solanum tuberosum]
JMSF030E21Sequence651010319 (3)632001220 (3)ref|XP_008353709.1|1e-42PREDICTED: probable plastidic glucose transporter 2 [Malus domestica]

Alignment

This contig is upended


. : . : . : . : . : . :
JMSF030E21+ ATCAGGTATGTTCATCAAAGCATAGGATGTCCTCACATATAC
                      ____________________________________________________________
consensus ATCAGGTATGTTCATCAAAGCATAGGATGTCCTCACATATAC
 
. : . : . : . : . : . :
JMSF030E21+ CAACTATTATTATTCAATTATATACCCTTTACTTTACTTTATCTGGGGAGCATTAATATA
                      ____________________________________________________________
consensus CAACTATTATTATTCAATTATATACCCTTTACTTTACTTTATCTGGGGAGCATTAATATA
 
. : . : . : . : . : . :
JMSF030E21+ TTATTGGAACTGCAAGTTGCAAGTTTACCAATATGCAGACTAAAAAAATAATAGAAATAG
                      ____________________________________________________________
consensus TTATTGGAACTGCAAGTTGCAAGTTTACCAATATGCAGACTAAAAAAATAATAGAAATAG
 
. : . : . : . : . : . :
JMSF030E21+ CCCCTTATATATAATCTGCTCTAAAATCACACAGATTTCTACACAACTGAGGCTCAAAAA
                      ____________________________________________________________
consensus CCCCTTATATATAATCTGCTCTAAAATCACACAGATTTCTACACAACTGAGGCTCAAAAA
 
. : . : . : . : . : . :
JMSF004D17+ CCTGCTTCTTCCTTATCGTG
JMSF030E21+ GGTAGATGTTTAAATATCTCAAAATGAGTATGTAACTTTACCTGCTTCTTCCTTATCGTG
JMFF047H18+ CCTGCTTCTTCCTTATCGTG
                      ____________________________________________________________
consensus GGTAGATGTTTAAATATCTCAAAATGAGTATGTAACTTTACCTGCTTCTTCCTTATCGTG
 
. : . : . : . : . : . :
JMSF004D17+ AGGATAGGGATGTTCCTCCCTCTCGTAAGAATGGGAATGTTCCTCCCTCTCGTGAGGTTG
JMSF030E21+ AGGATAGGGATGTTCCTCCCTCTCGTAAGAATGGGAATGTTCCTCCCTCTCGTGAGGTTG
JMFF047H18+ AGGATAGGGATGTTCCTCCCTCTCGTAAGAATGGGAATGTTCCTCCCTCTCGTGAGGTTG
                      ____________________________________________________________
consensus AGGATAGGGATGTTCCTCCCTCTCGTAAGAATGGGAATGTTCCTCCCTCTCGTGAGGTTG
 
. : . : . : . : . : . :
JMSF004D17+ TGGATGATCCTTACTAAATGCACGTTTGTACATCGAGTATATATCTCCCTCACGCCCTCG
JMSF030E21+ TGGATGATCCTTACTAAATGCACGTTTGTACATCGAGTATATATCTCCCTCACGCCCTCG
JMFF047H18+ TGGATGATCCTTACTAAATGCACGTTTGTACATCGAGTATATATCTCCCTCACGCCCTCG
                      ____________________________________________________________
consensus TGGATGATCCTTACTAAATGCACGTTTGTACATCGAGTATATATCTCCCTCACGCCCTCG
 
. : . : . : . : . : . :
JMSF004D17+ CATATCAACAGCTGCTTAGGAACTCAAATCAACTCTGGAGCTGGCAGAAAGTTTGAAATC
JMSF030E21+ CATATCAACAGCTGCTTAGGAACTCAAATCAACTCTGGAGCTGGCAGAAAGTTTGAAATC
JMFF047H18+ CATATCAACAGCTGCTTAGGAACTCAAATCAACTCTGGAGCTGGCAGAAAGTTTGAAATC
                      ____________________________________________________________
consensus CATATCAACAGCTGCTTAGGAACTCAAATCAACTCTGGAGCTGGCAGAAAGTTTGAAATC
 
. : . : . : . : . : . :
JMSF004D17+ C
JMSF030E21+ CTGAAATTGGTAAAAATAAAAATGCAGAGATTGTATATAGAGGTGGGAGGTGGCTAAAAT
JMFF047H18+ CTGAAATTGGTAAAAATAAAAATGCAGAGATTGTATATAGAGGTGGGAGGTGGCTAAAAT
                      ____________________________________________________________
consensus CTGAAATTGGTAAAAATAAAAATGCAGAGATTGTATATAGAGGTGGGAGGTGGCTAAAAT
 
. : . : . : . : . : . :
JMSF030E21+ GCGCCCGTGGCGAAAGAGTTGGAGTTACGTAAAGGCGCCACGAGAAAAATGCAGAAATGG
JMFF047H18+ GCGCCCGTGGCGAAAGAGTTGGAGTTACGTAAAGGCGCCACGAGAAAAATGCAGAAATGG
                      ____________________________________________________________
consensus GCGCCCGTGGCGAAAGAGTTGGAGTTACGTAAAGGCGCCACGAGAAAAATGCAGAAATGG
 
. : . : . : . : . : . :
JMSF030E21+ ATGCTAGAGTGCGCCGTGAGTAAAGGTTTTGTGTTTCGGTCGGTGGACGGTGGTATTGCT
JMFF047H18+ ATGCTAGAGTGCGCCGTGAGTAAAGGTTTTGTGTTTCGGTCGGTGGACGGTGGTATTGCT
                      ____________________________________________________________
consensus ATGCTAGAGTGCGCCGTGAGTAAAGGTTTTGTGTTTCGGTCGGTGGACGGTGGTATTGCT
 
. : . : . : . : . : . :
JMSF030E21+ TTGGCGGT
JMFF047H18+ TTGGCGGTGAGAGTGATCCACCGGAAACCAAATCTTATATAAATCGCCGGTGAGAGTTCT
                      ____________________________________________________________
consensus TTGGCGGTGAGAGTGATCCACCGGAAACCAAATCTTATATAAATCGCCGGTGAGAGTTCT
 
. : . : . : . : . : . :
JMFF047H18+ GTGTAGATTTTTTTTCTGTTGTCTCTTCTGTGAGAGAGAGAGAAGTGTCTAGAACGCCGC
                      ____________________________________________________________
consensus GTGTAGATTTTTTTTCTGTTGTCTCTTCTGTGAGAGAGAGAGAAGTGTCTAGAACGCCGC