Contig 010319:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF047H18Sequence602010319 (3)ref|XP_009777886.1|4e-12PREDICTED: probable plastidic glucose transporter 3 [Nicotiana sylvestris] ref|588001220 (3)
JMSF004D17Sequence356010319 (3)ref|XP_009777886.1|9e-25PREDICTED: probable plastidic glucose transporter 3 [Nicotiana sylvestris] ref|281012538 (3)ref|XP_006349909.1|7e-32PREDICTED: apyrase 2 isoform X1 [Solanum tuberosum]
JMSF030E21Sequence651010319 (3)632001220 (3)ref|XP_008353709.1|1e-42PREDICTED: probable plastidic glucose transporter 2 [Malus domestica]

Alignment

This contig is upended


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JMSF030E21+                             ATCAGGTATGTTCATCAAAGCATAGGATGTCCTCACATATAC
                      ____________________________________________________________
consensus                               ATCAGGTATGTTCATCAAAGCATAGGATGTCCTCACATATAC
 
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JMSF030E21+           CAACTATTATTATTCAATTATATACCCTTTACTTTACTTTATCTGGGGAGCATTAATATA
                      ____________________________________________________________
consensus             CAACTATTATTATTCAATTATATACCCTTTACTTTACTTTATCTGGGGAGCATTAATATA
 
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JMSF030E21+           TTATTGGAACTGCAAGTTGCAAGTTTACCAATATGCAGACTAAAAAAATAATAGAAATAG
                      ____________________________________________________________
consensus             TTATTGGAACTGCAAGTTGCAAGTTTACCAATATGCAGACTAAAAAAATAATAGAAATAG
 
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JMSF030E21+           CCCCTTATATATAATCTGCTCTAAAATCACACAGATTTCTACACAACTGAGGCTCAAAAA
                      ____________________________________________________________
consensus             CCCCTTATATATAATCTGCTCTAAAATCACACAGATTTCTACACAACTGAGGCTCAAAAA
 
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JMSF004D17+                                                   CCTGCTTCTTCCTTATCGTG
JMSF030E21+           GGTAGATGTTTAAATATCTCAAAATGAGTATGTAACTTTACCTGCTTCTTCCTTATCGTG
JMFF047H18+                                                   CCTGCTTCTTCCTTATCGTG
                      ____________________________________________________________
consensus             GGTAGATGTTTAAATATCTCAAAATGAGTATGTAACTTTACCTGCTTCTTCCTTATCGTG
 
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JMSF004D17+           AGGATAGGGATGTTCCTCCCTCTCGTAAGAATGGGAATGTTCCTCCCTCTCGTGAGGTTG
JMSF030E21+           AGGATAGGGATGTTCCTCCCTCTCGTAAGAATGGGAATGTTCCTCCCTCTCGTGAGGTTG
JMFF047H18+           AGGATAGGGATGTTCCTCCCTCTCGTAAGAATGGGAATGTTCCTCCCTCTCGTGAGGTTG
                      ____________________________________________________________
consensus             AGGATAGGGATGTTCCTCCCTCTCGTAAGAATGGGAATGTTCCTCCCTCTCGTGAGGTTG
 
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JMSF004D17+           TGGATGATCCTTACTAAATGCACGTTTGTACATCGAGTATATATCTCCCTCACGCCCTCG
JMSF030E21+           TGGATGATCCTTACTAAATGCACGTTTGTACATCGAGTATATATCTCCCTCACGCCCTCG
JMFF047H18+           TGGATGATCCTTACTAAATGCACGTTTGTACATCGAGTATATATCTCCCTCACGCCCTCG
                      ____________________________________________________________
consensus             TGGATGATCCTTACTAAATGCACGTTTGTACATCGAGTATATATCTCCCTCACGCCCTCG
 
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JMSF004D17+           CATATCAACAGCTGCTTAGGAACTCAAATCAACTCTGGAGCTGGCAGAAAGTTTGAAATC
JMSF030E21+           CATATCAACAGCTGCTTAGGAACTCAAATCAACTCTGGAGCTGGCAGAAAGTTTGAAATC
JMFF047H18+           CATATCAACAGCTGCTTAGGAACTCAAATCAACTCTGGAGCTGGCAGAAAGTTTGAAATC
                      ____________________________________________________________
consensus             CATATCAACAGCTGCTTAGGAACTCAAATCAACTCTGGAGCTGGCAGAAAGTTTGAAATC
 
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JMSF004D17+           C                                                           
JMSF030E21+           CTGAAATTGGTAAAAATAAAAATGCAGAGATTGTATATAGAGGTGGGAGGTGGCTAAAAT
JMFF047H18+           CTGAAATTGGTAAAAATAAAAATGCAGAGATTGTATATAGAGGTGGGAGGTGGCTAAAAT
                      ____________________________________________________________
consensus             CTGAAATTGGTAAAAATAAAAATGCAGAGATTGTATATAGAGGTGGGAGGTGGCTAAAAT
 
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JMSF030E21+           GCGCCCGTGGCGAAAGAGTTGGAGTTACGTAAAGGCGCCACGAGAAAAATGCAGAAATGG
JMFF047H18+           GCGCCCGTGGCGAAAGAGTTGGAGTTACGTAAAGGCGCCACGAGAAAAATGCAGAAATGG
                      ____________________________________________________________
consensus             GCGCCCGTGGCGAAAGAGTTGGAGTTACGTAAAGGCGCCACGAGAAAAATGCAGAAATGG
 
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JMSF030E21+           ATGCTAGAGTGCGCCGTGAGTAAAGGTTTTGTGTTTCGGTCGGTGGACGGTGGTATTGCT
JMFF047H18+           ATGCTAGAGTGCGCCGTGAGTAAAGGTTTTGTGTTTCGGTCGGTGGACGGTGGTATTGCT
                      ____________________________________________________________
consensus             ATGCTAGAGTGCGCCGTGAGTAAAGGTTTTGTGTTTCGGTCGGTGGACGGTGGTATTGCT
 
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JMSF030E21+           TTGGCGGT                                                    
JMFF047H18+           TTGGCGGTGAGAGTGATCCACCGGAAACCAAATCTTATATAAATCGCCGGTGAGAGTTCT
                      ____________________________________________________________
consensus             TTGGCGGTGAGAGTGATCCACCGGAAACCAAATCTTATATAAATCGCCGGTGAGAGTTCT
 
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JMFF047H18+           GTGTAGATTTTTTTTCTGTTGTCTCTTCTGTGAGAGAGAGAGAAGTGTCTAGAACGCCGC
                      ____________________________________________________________
consensus             GTGTAGATTTTTTTTCTGTTGTCTCTTCTGTGAGAGAGAGAGAAGTGTCTAGAACGCCGC