Contig 010318:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF035K12Sequence546010318 (8)ref|NP_001268047.1|2e-101caffeoyl-CoA O-methyltransferase [Vitis vinifera] sp|Q43237.1|CAMT_VITVI RecName621010318 (8)ref|XP_011000123.1|6e-99PREDICTED: caffeoyl-CoA O-methyltransferase 2 [Populus euphratica]
JMFF047H06Sequence608010318 (8)gb|AAT37172.1|4e-112caffeoyl-CoA-O-methyltransferase [Broussonetia papyrifera]444004693 (2)ref|XP_009784106.1|4e-32PREDICTED: caffeoyl-CoA O-methyltransferase 1 isoform X2 [Nicotiana sylvestris]
JMFN043I05Sequence609010318 (8)ref|NP_001268047.1|3e-125caffeoyl-CoA O-methyltransferase [Vitis vinifera] sp|Q43237.1|CAMT_VITVI RecName
JMSF014M18Sequence426010318 (8)ref|NP_001268047.1|6e-80caffeoyl-CoA O-methyltransferase [Vitis vinifera] sp|Q43237.1|CAMT_VITVI RecName766010318 (8)ref|XP_011092559.1|5e-153PREDICTED: caffeoyl-CoA O-methyltransferase-like [Sesamum indicum]
JMSF022C18Sequence664010318 (8)ref|NP_001268047.1|3e-131caffeoyl-CoA O-methyltransferase [Vitis vinifera] sp|Q43237.1|CAMT_VITVI RecName741010318 (8)gb|EYU37656.1|2e-138hypothetical protein MIMGU_mgv1a012535mg [Erythranthe guttata]

Alignment

This contig is upended


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rJMFF035K12-                                                          TATTATATTGTA
                      ____________________________________________________________
consensus                                                             TATTATATTGTA
 
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rJMFF035K12-          AATAGGTTGAAGTAGAATTTTGGAATACAATTGTTAATTCACAGAATTGAAAAGGGTGAA
rJMSF022C18-                        GAATTTTGGAATACAATTGTTAATTCACAGAATTGAAAAGGGTGAA
                      ____________________________________________________________
consensus             AATAGGTTGAAGTAGAATTTTGGAATACAATTGTTAATTCACAGAATTGAAAAGGGTGAA
 
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rJMFF035K12-          AATTACAGAGGAAACTAAGTAATGAAACAATATAATAGAAGATGGGCGTAACGGCGACGA
rJMSF022C18-          AATTACAGAGGAAACTAAGTAATGAAACAATATAATAGAAGATGGGCGTAACGGCGACGA
                      ____________________________________________________________
consensus             AATTACAGAGGAAACTAAGTAATGAAACAATATAATAGAAGATGGGCGTAACGGCGACGA
 
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rJMFF035K12-          TGAAGTTAAAGGTTTAGTAGAGACGGCGGCAGAGGGTGATCCCATCGCCGACGGGAAGTT
rJMSF022C18-          TGAAGTTAAAGGTTTAGTAGAGACGGCGGCAGAGGGTGATCCCATCGCCGACGGGAAGTT
rJMSF014M18-                      TTTAGTAGACACGGCGGCAGAGGGTGATCCCATCTCCGACGGGAAGTT
                      ____________________________________________________________
consensus             TGAAGTTAAAGGTTTAGTAGAGACGGCGGCAGAGGGTGATCCCATCGCCGACGGGAAGTT
 
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rJMFF035K12-          GGCAAATCTCAATTCTTGGGTCATCAGCCAATGCTTTGTTCAGCTCCAACACGAAATCTC
rJMSF022C18-          GGCAAATCTCAATTCTTGGGTCATCAGCCAATGCTTTGTTCAGCTCCAACACGAAATCTC
rJMSF014M18-          GGCAAATCTCAATTCTTGGGTCAGCAGCCAATGCTTTGTTCAGCTCCAACACGAAATCTC
                      ____________________________________________________________
consensus             GGCAAATCTCAATTCTTGGGTCATCAGCCAATGCTTTGTTCAGCTCCAACACGAAATCTC
 
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rJMFF035K12-          TGTAGTAGCGTACGTACTTCCTCAGCGGCGCATCCGCCGGCGCCACCACCGATCCATTCC
rJMSF022C18-          TGTAGTAGCGTACGTACTTCCTCAGCGGCGCATCCGCCGGCGCCACCACCGATCCATTCC
rJMSF014M18-          TGTAGTAGCGTACGTACTTCCTCAGCGGCGCATCCGCCGGCGCCACCACCGATCCATTCC
JMSF022C18+                                              GCCGGCGCCACCACCGATCCATTCC
                      ____________________________________________________________
consensus             TGTAGTAGCGTACGTACTTCCTCAGCGGCGCATCCGCCGGCGCCACCACCGATCCATTCC
 
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rJMFF035K12-          ACAACGTGTTGTCGTATCCAATCAGTCCACCAACCTTAACCAGATCGATCAGCCTCTTGT
rJMSF022C18-          ACAACGTGTTGTCGTATCCAATCAGTCCACCAACCTTAACCAGATCGATCAGCCTCTTGT
rJMSF014M18-          ACAACGTGTTGTCGTATCCAATCAGTCCACCAACCTTAACCAGATCGATCAGCCTCTTGT
JMSF022C18+           ACAACGTGTTGTCGTATCCAATCAGTCCACCAACCTTAACCAGATCGATCAGCCTCTTGT
JMFN043I05+            CAACGTGTTGTCGTATCCAATCAGTCCACCAACCTTAACCAGATCGATCAGCCTCTTGT
                      ____________________________________________________________
consensus             ACAACGTGTTGTCGTATCCAATCAGTCCACCAACCTTAACCAGATCGATCAGCCTCTTGT
 
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rJMFF035K12-          GATAGTTCAAGTAGTTGTCCTTGTCGGCATCCACGAAGATAAAATCATACGAGCCCTGGT
rJMSF022C18-          GATAGTTCAAGTAGTTGTCCTTGTCGGCATCCACGAAGATAAAATCATACGAGCCCTGGT
rJMSF014M18-          GATAGTTCAAGTAGTTGTCCTTGTCGGCATCCACGAAGATAAAATCATACGAGCCCTGGT
JMFF035K12+                                         CCACGAAGATAAAATCATACGAGCCCTGGT
JMSF022C18+           GATAGTTCAAGTAGTTGTCCTTGTCGGCATCCACGAAGATAAAATCATACGAGCCCTGGT
JMFN043I05+           GATAGTTCAAGTAGTTGTCCTTGTCGGCATCCACGAAGATAAAATCATACGAGCCCTGGT
                      ____________________________________________________________
consensus             GATAGTTCAAGTAGTTGTCCTTGTCGGCATCCACGAAGATAAAATCATACGAGCCCTGGT
 
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rJMFF035K12-          ATTTTCCATCTTGGATCATTTGATCAAGAACAGGAAGTGCAGGGCCTTCCTTGAATTCAA
rJMSF022C18-          ATTTTCCATCTTGGATCATTTGATCAAGAACAGGAAGTGCAGGGCCTTCCTTGAATTCAA
rJMSF014M18-          ATTTTCCATCTTGGATCATTTGATCAAGAACAGGAAGTGCAGGGCCTTCCTTGAATTCAA
JMFF035K12+           ATTTTCCATCTTGGATCATTTGATCAAGAACAGGAAGTGCAGGGCCTTCCTTGAATTCAA
JMSF022C18+           ATTTTCCATCTTGGATCATTTGATCAAGAACAGGAAGTGCAGGGCCTTCCTTGAATTCAA
JMFN043I05+           ATTTTCCATCTTGGATCATTTGATCAAGAACAGGAAGTGCAGGGCCTTCCTTGAATTCAA
JMFF047H06+                                                              TGAAATCAA
                      ____________________________________________________________
consensus             ATTTTCCATCTTGGATCATTTGATCAAGAACAGGAAGTGCAGGGCCTTCCTTGAATTCAA
 
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rJMFF035K12-          TCTTGTGAGCTACGCCGGCCTTTTGGATGACCGGGAGACCCAACTCGTAGTTTTCGCGGT
rJMSF022C18-          TCTTGTGAGCTACGCCGGCCTTTTGGATGACCGGGAGACCCAACTCGTAGTTTTCGCGGT
rJMSF014M18-          TCTTGTGAGCTACGCCGGCCTTTTGGATGACCGGGAGACCCAACTCGTAGTTTTCGCGGT
JMFF035K12+           TCTTGTGAGCTACGCCGGCCTTTTGGATGACCGGGAGACCCAACTCGTAGTTTTCGCGGT
JMSF022C18+           TCTTGTGAGCTACGCCGGCCTTTTGGATGACCGGGAGACCCAACTCGTAGTTTTCGCGGT
JMSF014M18+           TCTTGTGAGCTACGCCGGCCTTTTGGATGACCGGGAGACCCAACTCGTAGTTTTCGCGGT
JMFN043I05+           TCTTGTGAGCTACGCCGGCCTTTTGGATGACCGGGAGACCCAACTCGTAGTTTTCGCGGT
JMFF047H06+           TCTTGTGTGCAACGCCGGCCTTTTCGATCACCGGAAGACCCAAATCGTAGTTTTCCCGGT
                      ____________________________________________________________
consensus             TCTTGTGAGCTACGCCGGCCTTTTGGATGACCGGGAGACCCAACTCGTAGTTTTCGCGGT
 
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rJMFF035K12-          TGATATCCATGGCCAAAATCTTGCCGTCATGAGGGAGAGCAAGGGCAGTGGCGANAANAN
rJMSF022C18-          TGATATCCATGGCCAAAATCTTGCCGTCATGAGGGAGAGCAAGGGCAGTGGCGAGAAGAG
rJMSF014M18-          TGATATCCATGGCCAAAATCTTGCCGTCATGAGGGAGAGCAAGAGCAGTGGCGAGAAGAG
JMFF035K12+           TGATATCCATGGCCAAAATCTTGCCGTCATGAGGGAGAGCAAGGGCAGTGGCGAGAAGAG
JMSF022C18+           TGATATCCATGGCCAAAATCTTGCCGTCATGAGGGAGAGCAAGGGCAGTGGCGAGAAGAG
JMSF014M18+           TGATATCCATGGCCAAAATCTNGCCGTCATGAGGGAGAGCAAGAGCAGTGGCGAGAAGAG
JMFN043I05+           TGATATCCATGGCCAAAATCTTGCCGTCATGAGGGAGAGCAAGAGCAGTGGCGAGAAGAG
JMFF047H06+           TAATGTCCATGGCCAAAATCTTGCCGTCATCTGGAAGAGCGAGGGCGGTGGCGAGGAGAG
                      ____________________________________________________________
consensus             TGATATCCATGGCCAAAATCTTGCCGTCATGAGGGAGAGCAAGGGCAGTGGCGAGAAGAG
 
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rJMFF035K12-          AGTAACCAG                                                   
rJMSF022C18-          AGTAACCAGTGTAGACGCCAATCTCCATGGTGTTTTTGGCATCGATGAGCTTGAGAAGCA
rJMSF014M18-          AGTAACCAGTGTAGACGCCAATCTCCATGGTGTTTTTGGCATTGATGAGCTTGAGAAGCA
JMFF035K12+           AGTAACCAGTGTAGACGCCAATCTCCATGGTGTTTTTGGCATCGATGAGCTTGAGAAGCA
JMSF022C18+           AGTAACCAGTGTAGACGCCAATCTCCATGGTGTTTTTGGCATCGATGAGCTTGAGAAGCA
JMSF014M18+           AGTAACCAGTGTAGACGCCAATCTCCATGGTGTTTTTGGCATTGATGAGCTTGAGAAGCA
JMFN043I05+           AGTAACCAGTGTAGACGCCAATCTCCATGGTGTTTTTGGCATTGATGAGCTTGAGAAGCA
JMFF047H06+           AGTAGCCAGTGAAAACGCCAATCTCCATGGTGTTCTTGGCATTGATTAGCTTGAGAAGCA
                      ____________________________________________________________
consensus             AGTAACCAGTGTAGACGCCAATCTCCATGGTGTTTTTGGCATTGATGAGCTTGAGAAGCA
 
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rJMSF022C18-          TGTTCAAGAACTGGCCTTCATCAGCAGAAGTGGTCATGATGTTCCAAGGGTGATTTGCTG
rJMSF014M18-          TGTTCAAGAACTGGCCTTCATCAGCAGAAGTGGTCATGATGTTCCAAGGGTGATTTGCTG
JMFF035K12+           TGTTCAAGAACTGGCCTTCATCAGCAGAAGTGGTCATGATGTTCCAAGGGTGATTTGCTG
JMSF022C18+           TGTTCAAGAACTGGCCTTCATCAGCAGAAGTGGTCATGATGTTCCAAGGGTGATTTGCTG
JMSF014M18+           TGTTCAAGAACTGGCCTTCATCAGCAGAAGTGGTCATGATGTTCCAAGGGTGATTTGCTG
JMFN043I05+           TGTTCAAGAACTGGCCTTCATCAGCAGAAGTGGTCATGATGTTCCAAGGGTGATTTGCTG
JMFF047H06+           TGTTCAAGAATTGCCCTTCATCAGCTGAGGTTGTCATGATGTTCCATGGGTGTTTTGCTG
                      ____________________________________________________________
consensus             TGTTCAAGAACTGGCCTTCATCAGCAGAAGTGGTCATGATGTTCCAAGGGTGATTTGCTG
 
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rJMSF022C18-          TTATCTCCCGGAGTTCTTTCATGGTTTCTGGCTCT                         
rJMSF014M18-          TTATCTCCCGGAGCTCTTTCATGGCCTCTGGCTCTCTTGGGTACACACTAGTTTCAAGAA
JMFF035K12+           TTATCTCCCGGAGTTCTTTCATGGTTTCTGGCTCTCTTGGGTACACACTAGTTTCAAGAA
JMSF022C18+           TTATCTCCCGGAGTTCTTTCATGGTTTCTGGCTCTCTTGGGTACACACTAGTTTCAAGAA
JMSF014M18+           TTATCTCCCGGAGCTCTTTCATGGCCTCTGGCTCTCTTGGGTACACACTAGTTTCAAGAA
JMFN043I05+           TTATCTCCCGGAGCTCTTTCATGGCCTCTGGCTCTCTTGGGTACACACTAGTTTCAAGAA
JMFF047H06+           TTATCTCTCTGAGCTCCTTCATGGATTCTGGCTCTCTTGGGTACACACTTGTTTCAAGAA
                      ____________________________________________________________
consensus             TTATCTCCCGGAGCTCTTTCATGGTTTCTGGCTCTCTTGGGTACACACTAGTTTCAAGAA
 
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rJMSF014M18-          TATACTGGTAAAGAGCATCACTTT                                    
JMFF035K12+           TATACTGGTAAAGAGCATCACTTTGCAAGAGACTCTTGTGCCCAACTTCTTGGTGTCTG 
JMSF022C18+           TATACTGGTAAAGAGCATCACTTTGCAAGAGACTCTTGTGCCCAACTTCTTGGTGTCTGC
JMSF014M18+           TATACTGGTAAAGAGCATCACTTTGCAAGAGACTCTTGTGTCCAACTTCTTGGTGTCTGC
JMFN043I05+           TATACTGGTAAAGAGCATCACTTTGCAAGAGACTCTTGTGTCCAACTTCTTGGTGTCTGC
JMFF047H06+           TATACTGGTAAAGAGCATCACTCTGCAAGAGACTCTTGTGGCCAACTTCTTGGTGTCTGC
                      ____________________________________________________________
consensus             TATACTGGTAAAGAGCATCACTTTGCAAGAGACTCTTGTGTCCAACTTCTTGGTGTCTGC
 
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JMSF022C18+           CAGTTTCTTCATTGGTTGCCATTT                                    
JMSF014M18+           CAGCTTCTCCATTGGTTGCCATTTTCTTTGTTTCTACTTTGATATTTCTAAAGCTTTCTT
JMFN043I05+           CAGCTTCTCCATTGGTTGCCATTTTCTTTGTTTCTACTTTGATATTTCTAAAGCTTTCTT
JMFF047H06+           CAGCATCTCCATCGGTTGCCATTTGGATGGGTTGTGAAGTGTGAAGGCCGGCCGCCGGGG
                      ____________________________________________________________
consensus             CAGCTTCTCCATTGGTTGCCATTTTCTTTGTTTCTACTTTGATATTTCTAAAGCTTTCTT
 
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JMSF014M18+           AATG                                                        
JMFN043I05+           AATG                                                        
JMFF047H06+           AATCGGAGATTGTTGTTGTATAGTAAGTCAGATAGGTAGGTAGAATATTGAAGTGATAAT
                      ____________________________________________________________
consensus             AATGGGAGATTGTTGTTGTATAGTAAGTCAGATAGGTAGGTAGAATATTGAAGTGATAAT