Contig 010317:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMFF007A18+                               TTCAATATCAAGATGGCATATGTTGCATATTGTCACAGAT
                      ____________________________________________________________
consensus                                 TTCAATATCAAGATGGCATATGTTGCATATTGTCACAGAT
 
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JMFF007A18+           GCAGGAGCAGTATCGTATTGGTAATGGTTTCCTTGACAAAAGCTATCAAAGAAGTCGCTC
                      ____________________________________________________________
consensus             GCAGGAGCAGTATCGTATTGGTAATGGTTTCCTTGACAAAAGCTATCAAAGAAGTCGCTC
 
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JMFF007A18+           TCAGGAATCTCGTCTTCATCACCTGTATCAGCAGGCACTTGATTGATTTCAACCTCAACT
                      ____________________________________________________________
consensus             TCAGGAATCTCGTCTTCATCACCTGTATCAGCAGGCACTTGATTGATTTCAACCTCAACT
 
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JMFF007A18+           TTTGGGGCCGTCTTTACTCCATCGGAATCTCCAGCGATCTTCACATGCTCCTCCTCGCTT
JMFF024E07+                                                             CTCCTCACTT
                      ____________________________________________________________
consensus             TTTGGGGCCGTCTTTACTCCATCGGAATCTCCAGCGATCTTCACATGCTCCTCCTCGCTT
 
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JMFF007A18+           GGAATTTGAACGTCTTGTCCATGGATTGAAGATAACCCTGGGGTTTGA---TCCACCATA
JMFF024E07+           GGAATTTGAACATCTTGCCCATGGATTGAAGATAACCCTGGGGTTTGAGCGACCACCATA
JMFF047C02+                                                               CCACCATA
                      ____________________________________________________________
consensus             GGAATTTGAACGTCTTGTCCATGGATTGAAGATAACCCTGGGGTTTGAGCGTCCACCATA
 
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JMFF007A18+           GGAGCGGATCTGCGGGGATCAAGAGCCTCCATCACCTCGTCTTTGAAACTGGACAGCTCA
JMFF024E07+           GGAGCGGATCTGCGGAGACCGAGAGCCTCCATCACCTCGTCTCTGAAACTCGAGAGCTCA
JMFF047C02+           GGAGCGGATCTGCGGAGACCGAGAGCCTCCATCACCTCGTCTCTGAAACTCGAGAGCTCA
                      ____________________________________________________________
consensus             GGAGCGGATCTGCGGAGACCGAGAGCCTCCATCACCTCGTCTCTGAAACTCGAGAGCTCA
 
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JMFF007A18+           ACCCTTAAGTGCTCCTGAATAGCTTGAAATCGTGTATCAATTATGCGGTTCAACTCCACC
JMFF024E07+           ACTCTTAATTGCTCCGGAATAGCTTGAAATCCTTTATCAATTATGCGGCTCAACTCCACC
JMFF047C02+           ACTCTTAATTGCTCCGGAATAGCTTGAAATCCTTTATCAATTATGCGGCTCAACTCCACC
                      ____________________________________________________________
consensus             ACTCTTAATTGCTCCGGAATAGCTTGAAATCCTTTATCAATTATGCGGCTCAACTCCACC
 
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JMFF007A18+           CTCTGAGCTTCCACCTTGTCTGTTCCAGCTTCCA                          
JMFF024E07+           ATCTGAGCTTCCACCTTGTCAATTCGAGCTTCCACCTTGTCCATTCGAGCTTCCATGGTA
JMFF047C02+           ATCTGAGCTTCCACCTTGTCAATTCGAGCTTCCACCTTGTCCATTCGAGCTTCCATGGTA
                      ____________________________________________________________
consensus             ATCTGAGCTTCCACCTTGTCAATTCGAGCTTCCACCTTGTCCATTCGAGCTTCCATGGTA
 
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JMFF024E07+           GTAGGGTTTTGAGTTCCTGAGGCTTGGAGCAAGTCTGGGAGAAATGAAGTTTGAAGAGGT
JMFF047C02+           GTAGGGTTTTGAGTTCCTGAGGCTTGGAGCAAGTCTGGGAGAAATGAAGTTTGAAGAGGT
                      ____________________________________________________________
consensus             GTAGGGTTTTGAGTTCCTGAGGCTTGGAGCAAGTCTGGGAGAAATGAAGTTTGAAGAGGT
 
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JMFF024E07+           GAAGAGCAAGGAGAAGACCCCAATGGGCCGAGCCGCCGACTGGGCGAGAGCCAAGAGCGG
JMFF047C02+           GAAGAGCAAGGAGAAGACCCCAATGGGCCGAGCCGCCGACTGGGCGAGAGCCAAGAGCGG
                      ____________________________________________________________
consensus             GAAGAGCAAGGAGAAGACCCCAATGGGCCGAGCCGCCGACTGGGCGAGAGCCAAGAGCGG
 
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JMFF024E07+           GTGCCGAAGGTTGATTGTGAGAATCCTTGAAGGTCGATTGTGAACCAGATGCGTTTTCT 
JMFF047C02+           GTGCCGAAGGTTGATTGTGAGAATCCTTGAAGGTCGATTGTGAACCAGATGCGTTTTCTC
                      ____________________________________________________________
consensus             GTGCCGAAGGTTGATTGTGAGAATCCTTGAAGGTCGATTGTGAACCAGATGCGTTTTCTC