Contig 010315:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF046P04Sequence529010315 (2)421001217 (2)
JMSF047B21Sequence674010315 (2)ref|XP_004239372.1|2e-22PREDICTED: probable serine/threonine-protein kinase At1g18390 [Solanum lycopers709001217 (2)ref|XP_009609054.1|4e-67PREDICTED: probable serine/threonine-protein kinase At1g18390 [Nicotiana toment

Alignment

This contig is upended


. : . : . : . : . : . :
JMSF047B21+ GTTCTTGGTGAGCTTGCATTCCCAC
                      ____________________________________________________________
consensus GTTCTTGGTGAGCTTGCATTCCCAC
 
. : . : . : . : . : . :
JMSF047B21+ GGNCAGTGGCTGCAGTTGGGGAGGCTAGCGGTCCGNCANGGGCGGAGGGCCGATAAGCGG
                      ____________________________________________________________
consensus GGNCAGTGGCTGCAGTTGGGGAGGCTAGCGGTCCGNCANGGGCGGAGGGCCGATAAGCGG
 
. : . : . : . : . : . :
JMSF047B21+ GAGCAGGAAGAGTCCGAGACCCGGANCGGCGACCCGGAGAGAGAAATGGATCTCGCCGGA
                      ____________________________________________________________
consensus GAGCAGGAAGAGTCCGAGACCCGGANCGGCGACCCGGAGAGAGAAATGGATCTCGCCGGA
 
. : . : . : . : . : . :
JMSF047B21+ ACCGACACAGAGCAGTTCCGGCGAGANTGATACATAGANGAAGCAGGAGAGAGGAGCAGG
                      ____________________________________________________________
consensus ACCGACACAGAGCAGTTCCGGCGAGANTGATACATAGANGAAGCAGGAGAGAGGAGCAGG
 
. : . : . : . : . : . :
JMSF047B21+ GAGGTGGAGGCGGGGTCGTAGTGGCGAAGAGAAAAGGAGAGATTGTTAATGGAGATGAGA
                      ____________________________________________________________
consensus GAGGTGGAGGCGGGGTCGTAGTGGCGAAGAGAAAAGGAGAGATTGTTAATGGAGATGAGA
 
. : . : . : . : . : . :
JMSF047B21+ GCAAAGCGAAGAGATGAGCAGTGGATTTGGAAAGAAGGGTGGCCGCAGCCGGGGGAGGCG
                      ____________________________________________________________
consensus GCAAAGCGAAGAGATGAGCAGTGGATTTGGAAAGAAGGGTGGCCGCAGCCGGGGGAGGCG
 
. : . : . : . : . : . :
JMSF047B21+ GAGAAGGGGTAAGGAGGAGGAGCGGCGGTGAAAGGCGGGCATGAGGAGGCGTTGACAGCA
                      ____________________________________________________________
consensus GAGAAGGGGTAAGGAGGAGGAGCGGCGGTGAAAGGCGGGCATGAGGAGGCGTTGACAGCA
 
. : . : . : . : . : . :
JMSF047B21+ GAGGACGGCGGCGAGCANCCGTGAGCTAGCGCCGCTGCTGCTGTGATGAGAAATATTAGG
                      ____________________________________________________________
consensus GAGGACGGCGGCGAGCANCCGTGAGCTAGCGCCGCTGCTGCTGTGATGAGAAATATTAGG
 
. : . : . : . : . : . :
JMSF047B21+ AAGACGGCGGAATGCGGTGGCGGCATGGCGGAGCAAAAAGTGAGAATCTTTATTCTTTAA
                      ____________________________________________________________
consensus AAGACGGCGGAATGCGGTGGCGGCATGGCGGAGCAAAAAGTGAGAATCTTTATTCTTTAA
 
. : . : . : . : . : . :
JMSF047B21+ TTTAAAGGTGAATCATAAATGAGGAAAGAAGAAGAAGTAGGAATCTGGGAAAATGTAGGA
JMFF046P04+ ATCATAAATGAGGAAAGAAGAAGAAGTAGGAATCTGGGAAAATGTAGGA
                      ____________________________________________________________
consensus TTTAAAGGTGAATCATAAATGAGGAAAGAAGAAGAAGTAGGAATCTGGGAAAATGTAGGA
 
. : . : . : . : . : . :
JMSF047B21+ TGAATATAGTGTTGATGTAGATTTGGTTTTGAGATCATTCATTCATTGATTCATTAGGGG
JMFF046P04+ TGAATATAGTGTTGATGTAGATTTGGTTTTGAGATCATTCATTCATGNATTCATTAGGGG
                      ____________________________________________________________
consensus TGAATATAGTGTTGATGTAGATTTGGTTTTGAGATCATTCATTCATTGATTCATTAGGGG
 
. : . : . : . : . : . :
JMSF047B21+ ATGGATGCCTAGGATGTTGGAAGAAAGTTGGTGGGTGTTGTGGAGGAC
JMFF046P04+ ATGGATGCCTAGGATGTTGGAAGAAAGTTGGTGGGTTTTGTGGAGGACGAGGAAGTTGGA
                      ____________________________________________________________
consensus ATGGATGCCTAGGATGTTGGAAGAAAGTTGGTGGGTTTTGTGGAGGACGAGGAAGTTGGA
 
. : . : . : . : . : . :
JMFF046P04+ AGTGGGAAGATGTAAGAATAGTAGAAGAGAAGGGGAGAGAGGTCACGTGAAGAGAATGGG
                      ____________________________________________________________
consensus AGTGGGAAGATGTAAGAATAGTAGAAGAGAAGGGGAGAGAGGTCACGTGAAGAGAATGGG
 
. : . : . : . : . : . :
JMFF046P04+ ATGAAGACAAATCTGTATAAAAAGGTGGAAGACCAAGGCTGTCAAATTTTTGTGATGAAA
                      ____________________________________________________________
consensus ATGAAGACAAATCTGTATAAAAAGGTGGAAGACCAAGGCTGTCAAATTTTTGTGATGAAA
 
. : . : . : . : . : . :
JMFF046P04+ ACGGCATAAGTGTAACTCTTCTAAATAGAATGTCACAATTTAAACTTCAATAAGGGTATT
                      ____________________________________________________________
consensus ACGGCATAAGTGTAACTCTTCTAAATAGAATGTCACAATTTAAACTTCAATAAGGGTATT
 
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JMFF046P04+ AATTTTTTGTACTTAAATATGTTTAAAAATATATATATATATATATATATGAAACAGATA
                      ____________________________________________________________
consensus AATTTTTTGTACTTAAATATGTTTAAAAATATATATATATATATATATATGAAACAGATA
 
. : . : . : . : . : . :
JMFF046P04+ CTACGCTGTAACAGAATTAAAAAAAAATGAAATTTTTGAACAAACAACCTCTACATACTC
                      ____________________________________________________________
consensus CTACGCTGTAACAGAATTAAAAAAAAATGAAATTTTTGAACAAACAACCTCTACATACTC
 
. : . : . : . : . : . :
JMFF046P04+ TACCCTCATCATTTCATTCATCTATTTTTTTTTTTAAACACTATTCTTATTTATGTAGGT
                      ____________________________________________________________
consensus TACCCTCATCATTTCATTCATCTATTTTTTTTTTTAAACACTATTCTTATTTATGTAGGT