Contig 010314:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF021E05Sequence417010314 (2)gb|AII99841.1|5e-27chloroplast sedoheptulose-1,7-bisphosphatase [Nicotiana tabacum]694011187 (2)ref|XP_009590435.1|3e-72PREDICTED: sedoheptulose-1,7-bisphosphatase, chloroplastic [Nicotiana tomentosi
JMFF046I12Sequence519010314 (2)ref|XP_009776701.1|2e-51PREDICTED: sedoheptulose-1,7-bisphosphatase, chloroplastic-like [Nicotiana sylv529011187 (2)emb|CDP14065.1|5e-19unnamed protein product [Coffea canephora]

Alignment

This contig is upended


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JMFF046I12+                                TTAGCCAGCAAATCAACAGCAAGCTGTTCATCTCCGAAA
                      ____________________________________________________________
consensus                                  TTAGCCAGCAAATCAACAGCAAGCTGTTCATCTCCGAAA
 
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JMFF046I12+           GAATTGACACAGGCTGTTCCTCCACAAGAAGCTGTTCTGACTTTAAATGCAATTGTTCTT
                      ____________________________________________________________
consensus             GAATTGACACAGGCTGTTCCTCCACAAGAAGCTGTTCTGACTTTAAATGCAATTGTTCTT
 
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JMFF021E05+              GCCTCTCCCATGCATATCATCAGGCTGATCAGCCCCTTGTCCGATGTCGACTTTGTA
JMFF046I12+           ATTGCCTCTCCCATGCATATCATCAGGCTGATCAGCCCCTTGTCCGATGTCGACTTTGTA
                      ____________________________________________________________
consensus             ATTGCCTCTCCCATGCATATCATCAGGCTGATCAGCCCCTTGTCCGATGTCGACTTTGTA
 
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JMFF021E05+           AGAAATTCTTCCAGGCTGTCACCTATCTCACACTTGGTCACTGGGGAAGAAGAGTGTTTC
JMFF046I12+           AGAAATTCTTCCAGGCTGTCACCTATCTCACACTTGGTCACTGGGGAAGAAGAGTGTTTC
                      ____________________________________________________________
consensus             AGAAATTCTTCCAGGCTGTCACCTATCTCACACTTGGTCACTGGGGAAGAAGAGTGTTTC
 
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JMFF021E05+           CTTGTCTTCACAACATTTAGTGAAGATTTGGGCAAAACGCGCAATGATTCCCCGAATAAC
JMFF046I12+           CTTGTCTTCACAACATTTAGTGAAGATTTGGGCAAAACGCGCAATGATTCCCCGAATAAC
                      ____________________________________________________________
consensus             CTTGTCTTCACAACATTTAGTGAAGATTTGGGCAAAACGCGCAATGATTCCCCGAATAAC
 
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JMFF021E05+           GAACTCTTTAAACTCTTGGTGCTGAAAGATGGAGAAATGGACCAGCCTGGAGTAGCTAGT
JMFF046I12+           GAACTCTTTAAACTCTTGGTGCTGAAAGATGGAGAAATGGACCAGCCTGGAGTAGCTAGT
                      ____________________________________________________________
consensus             GAACTCTTTAAACTCTTGGTGCTGAAAGATGGAGAAATGGACCAGCCTGGAGTAGCTAGT
 
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JMFF021E05+           GAAGATGAATGTTGAGAGGTGACATTTGGGAGGAGAGCTGCACGTGCAAAGCATGTGATA
JMFF046I12+           GAAGATGAATGTTGAGAGGTGACATTTGGGAGGAGAGCTGCACGTGCAAAGCATGTGATA
                      ____________________________________________________________
consensus             GAAGATGAATGTTGAGAGGTGACATTTGGGAGGAGAGCTGCACGTGCAAAGCATGTGATA
 
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JMFF021E05+           CCAGTCTCCATGATTTGTGTTTGTGGACACTCAATTCCAGAAGAAGAAGAAGTTGTATGT
JMFF046I12+           CCAGTCTCCATGATTTGTGTTTGTGGACACTCAATTCCAGAAGAAGAAGAAGTTGTATGT
                      ____________________________________________________________
consensus             CCAGTCTCCATGATTTGTGTTTGTGGACACTCAATTCCAGAAGAAGAAGAAGTTGTATGT
 
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JMFF021E05+           GTTGATGTTGGTGAGTTAAGAAGAAAAGTTTGAGGGTGGCAACTGGTCTGATAGGCAGTT
JMFF046I12+           GTTGATGTTGGTGAGTTAAGAAGAAAAGTTTGAGGGTGGCAACTGGTCTGATAGGCAGTT
                      ____________________________________________________________
consensus             GTTGATGTTGGTGAGTTAAGAAGAAAAGTTTGAGGGTGGCAACTGGTCTGATAGGCAGTT