Contig 010302:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF043O19Sequence644010302 (4)ref|XP_009606677.1|2e-84PREDICTED: bet1-like protein At4g14600 [Nicotiana tomentosiformis] ref|XP_009606634010302 (4)ref|XP_009606677.1|1e-80PREDICTED: bet1-like protein At4g14600 [Nicotiana tomentosiformis] ref|XP_009606
JMSF007B19Sequence311010302 (4)ref|XP_006338097.1|3e-31PREDICTED: bet1-like protein At4g14600-like [Solanum tuberosum]711010302 (4)ref|XP_009606677.1|4e-84PREDICTED: bet1-like protein At4g14600 [Nicotiana tomentosiformis] ref|XP_009606

Alignment

This contig is upended


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rJMFF043O19-                                                                 ACCCT
                      ____________________________________________________________
consensus                                                                    ACCCT
 
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rJMFF043O19-          GGAGAGTTTTTTTTTTTTTTTTCTGAAAACTTAAAAGTTCAATTCTTTGCAATCCAAAGT
                      ____________________________________________________________
consensus             GGAGAGTTTTTTTTTTTTTTTTCTGAAAACTTAAAAGTTCAATTCTTTGCAATCCAAAGT
 
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rJMFF043O19-          TGTAAGTTCCTCACCCAATAATATGTACAGATCACAGAATTCAAATGTGTCTTAATTAAG
rJMSF007B19-                 TCCTCACCCAATAATATGTACAGATCACAGAATTCAAATGTGTCTTAATTAAG
                      ____________________________________________________________
consensus             TGTAAGTTCCTCACCCAATAATATGTACAGATCACAGAATTCAAATGTGTCTTAATTAAG
 
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rJMFF043O19-          TACATATGTTTCTGCTCAGTCAGCAACAATCTCTGGCAAAAGTGGGGCTTGAACAAAATT
rJMSF007B19-          TACATATGTTTCTGCTCAGTCAGCAACAATCTCTGGCAAAAGTGGGGCTTGAACAAAATT
JMFF043O19+                           CAGTCAGCAACAATCTCTGGCAAAAGTGGGGCTTGAACAAAATT
                      ____________________________________________________________
consensus             TACATATGTTTCTGCTCAGTCAGCAACAATCTCTGGCAAAAGTGGGGCTTGAACAAAATT
 
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rJMFF043O19-          GTGCAAGTTGGTGTGCAGGGAGAATCCTTTAGCCTCTCCAGAGAATATGAGAGAGACTCC
rJMSF007B19-          GTGCAAGTTGGTGTGTGGGGAGAATCCTTTAGCCTCTCCAGAGAATATGAGAGAGACTCC
JMFF043O19+           GTGCAAGTTGGTGTGCAGGGAGAATCCTTTAGCCTCTCCAGAGAATATGAGAGAGACTCC
                      ____________________________________________________________
consensus             GTGCAAGTTGGTGTGCAGGGAGAATCCTTTAGCCTCTCCAGAGAATATGAGAGAGACTCC
 
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rJMFF043O19-          CACTATCGCCGTGAGAACTTGGCCAATAAGTAGATGACAAAGAAACATAGCAGCGCAAAA
rJMSF007B19-          CACTATCGCCGTGAGAACTTGGCCAATAAGTAGATGACAAAGAAACATAGCAGCGCAAAA
JMFF043O19+           CACTATCGCCGTGAGAACTTGGCCAATAAGTAGATGACAAAGAAACATAGCAGCGCAAAA
                      ____________________________________________________________
consensus             CACTATCGCCGTGAGAACTTGGCCAATAAGTAGATGACAAAGAAACATAGCAGCGCAAAA
 
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rJMFF043O19-          AGAACCACATGCATAACATGGTTTGCTCCTTCCTGGATGATACTCCTGTTCAGCCGCCTC
rJMSF007B19-          AGAACCACATGCATAACATGGTTTGCTCCTTCCTGGATGATACTCCTGTTCAGCCGCCTC
JMFF043O19+           AGAACCACATGCATAACATGGTTTGCTCCTTCCTGGATGATACTCCTGTTCAGCCGCCTC
                      ____________________________________________________________
consensus             AGAACCACATGCATAACATGGTTTGCTCCTTCCTGGATGATACTCCTGTTCAGCCGCCTC
 
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rJMFF043O19-          ATATTGTTCTTCACTCCAGCTTGGGCTTTGATCAATGTCATTTGCAGCTGGCTAATAAAG
rJMSF007B19-          ATATTGTTCTTCACTCCAGCTTGGGCTTTGATCAATGTCATTTGCAGCTGGCTAATAAAG
JMFF043O19+           ATATTGTTCTTCACTCCAGCTTGGGCTTTGATCAATGTCATTTGCAGCTGGCTAATAAAG
                      ____________________________________________________________
consensus             ATATTGTTCTTCACTCCAGCTTGGGCTTTGATCAATGTCATTTGCAGCTGGCTAATAAAG
 
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rJMFF043O19-          TCATTCTGGAATTTAGCTTCTGATTCAATCTCCTGAGCTACACTTTTAAGCTGTTTAACT
JMSF007B19+                                                          AAGCTGTTTAACT
rJMSF007B19-          TCATTCTGGAATTTAGCTTCTGATTCAATCTCCTGAGCTACACTTTTAAGCTGTTTAACT
JMFF043O19+           TCATTCTGGAATTTAGCTTCTGATTCAATCTCCTGAGCTACACTTTTAAGCTGTTTAACT
                      ____________________________________________________________
consensus             TCATTCTGGAATTTAGCTTCTGATTCAATCTCCTGAGCTACACTTTTAAGCTGTTTAACT
 
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rJMFF043O19-          TGCTTGCGAAGACCAGTGATCTCGTCATCCAAATCTCCATGCATCGGATCAATACGCAAC
JMSF007B19+           TGCTTGCGAAGACCAGTGATCTCGTCATCCAAATCTCCATGCATCGGATCAATACGCAAC
rJMSF007B19-          TGCTTGCGAAGACCAGTGATCTCGTCATCCAAATCTCCATGCATCGGATCAATACGCAAC
JMFF043O19+           TGCTTGCGAAGACCAGTGATCTCGTCATCCAAATCTCCATGCATCGGATCAATACGCAAC
                      ____________________________________________________________
consensus             TGCTTGCGAAGACCAGTGATCTCGTCATCCAAATCTCCATGCATCGGATCAATACGCAAC
 
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rJMFF043O19-          TGTATTTCATCCGAACCGCCTACCTGTCTCGTGCTTAATCCTTCTCTTGATCGATACGGC
JMSF007B19+           TGTATTTCATCCGAACCGCCTACCTGTCTCGTGCTTAATCCTTCTCTTGATCGATACGGC
rJMSF007B19-          TGTATTTCATCCGAACCGCCTACCTGTCTCGTGCTTAATCCTTCTCTTGATCGATACGGC
JMFF043O19+           TGTATTTCATCCGAACCGCCTACCTGTCTCGTGCTTAATCCTTCTCTTGATCGATACGGC
                      ____________________________________________________________
consensus             TGTATTTCATCCGAACCGCCTACCTGTCTCGTGCTTAATCCTTCTCTTGATCGATACGGC
 
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rJMFF043O19-          GCGGCACCGTAGAAATCACCACTTCTGTG                               
JMSF007B19+           GCGGCACCGTAGAAATCACCACTTCTGTGAGAACTTGAAGCCATTGAAGCAATTTGCAGG
rJMSF007B19-          GCGGCACCGTAGAAATCACCACTTCTGTGAGAACTTGAAGCCATTGAAGCAATTTGCAGG
JMFF043O19+           GCGGCACCGTAGAAATCACCACTTCTGTGAGAACTTGAAGCCATTGAAGCAATTTGCAGG
                      ____________________________________________________________
consensus             GCGGCACCGTAGAAATCACCACTTCTGTGAGAACTTGAAGCCATTGAAGCAATTTGCAGG
 
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JMSF007B19+           AATGAAAGGGGGGAAAAATCTCTAAAATATTTGATTAATGAAAATATTGCTGAATTGAAT
rJMSF007B19-          AATGAAAGGGGGGAAAAATCTCTAAAATATTTGATTAATGAAAATATTGCTGAATTGAAT
JMFF043O19+           AATGAAAGGGGGGAAAAATCTCTAAAATATTTGATTAATGAAAATATTGCTGAATTGAAT
                      ____________________________________________________________
consensus             AATGAAAGGGGGGAAAAATCTCTAAAATATTTGATTAATGAAAATATTGCTGAATTGAAT
 
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JMSF007B19+           CGATGAGGACCTAAGAGGATCAGAGAATTCTCGGACTGTTCTCTCTTAGAATTCAAC   
rJMSF007B19-          CGATGAGGACCTAAGAGGATCAGAGAATTCTCGGACTGTTCTCTCTTAGAATTCAAC   
JMFF043O19+           CGATGAGGACCTAAGAGGATCAGAGAATTCTCGGACTGTTCTCTCTTAGAATTCAACCGG
                      ____________________________________________________________
consensus             CGATGAGGACCTAAGAGGATCAGAGAATTCTCGGACTGTTCTCTCTTAGAATTCAACCGG