Contig 010301:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF043G09Sequence625010301 (3)ref|XP_004236038.1|287PREDICTED: uncharacterized protein LOC101250492 [Solanum lycopersicum]614010301 (3)ref|XP_004236038.1|233PREDICTED: uncharacterized protein LOC101250492 [Solanum lycopersicum]
JMFN033C21Sequence628010301 (3)ref|XP_004236038.1|289PREDICTED: uncharacterized protein LOC101250492 [Solanum lycopersicum]

Alignment

This contig is upended


. : . : . : . : . : . :
rJMFF043G09- ACCCTGGAGAGTTTTTTTT
                      ____________________________________________________________
consensus ACCCTGGAGAGTTTTTTTT
 
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rJMFF043G09- TTTTTTTTCATACGCAACCAAATATAATTAGGGACTTTACTTTTACGAAACTAATGTCTT
                      ____________________________________________________________
consensus TTTTTTTTCATACGCAACCAAATATAATTAGGGACTTTACTTTTACGAAACTAATGTCTT
 
. : . : . : . : . : . :
rJMFF043G09- GTTAACACCAACACAAAACCAAACACACATAATAATCAAATACAATGATACGAGTATGCC
                      ____________________________________________________________
consensus GTTAACACCAACACAAAACCAAACACACATAATAATCAAATACAATGATACGAGTATGCC
 
. : . : . : . : . : . :
rJMFF043G09- TAAATCTCCATCTCATCTGATCTGTTCTTAGGTGAAGAGCAAGAAAAGATTTGGGTTGGG
JMFN033C21+ CATCTGATCTGTTCTTAGGTGAAGAGCAAGAAAAGATTTGGGTTGGG
JMFF043G09+ AGAGCAAGAAAAGATNTGGGTTGGG
                      ____________________________________________________________
consensus TAAATCTCCATCTCATCTGATCTGTTCTTAGGTGAAGAGCAAGAAAAGATTTGGGTTGGG
 
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rJMFF043G09- GTGATGTAAAGTCTAGACATGAATGTGTTGGTGCTTAAATTGCATCATCTGGATATTGTG
JMFN033C21+ GTGATGTAGAGTCTAGACATGAATGTGTTGGTGCTTAGATTGCATCATCTGGATATTGTG
JMFF043G09+ GTGATGTAGAGTCTAGACATGAATGTGTTGGTGCTTAGATTGCATCATCTGGATATTGTG
                      ____________________________________________________________
consensus GTGATGTAGAGTCTAGACATGAATGTGTTGGTGCTTAGATTGCATCATCTGGATATTGTG
 
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rJMFF043G09- CCTGGAACATGACCTGGGCATCTCGCCGGCAAGAGGGACCACCGGAAGATTGTCGCAGTT
JMFN033C21+ CCTGGAACATGACCTGGGCATCTCGCCGGCAAGAGGGACCACCGGAAGATTGTCGCAGTT
JMFF043G09+ CCTGGAACATGACCTGGGCATCTCGCCGGCAAGAGGGACCACCGGAAGATTGTCGCAGTT
                      ____________________________________________________________
consensus CCTGGAACATGACCTGGGCATCTCGCCGGCAAGAGGGACCACCGGAAGATTGTCGCAGTT
 
. : . : . : . : . : . :
rJMFF043G09- GCAGATCTCTATCATGAAGCCGTCGGGGTCGTGAAAGAAAAGCTGATCCACGTAAATCCC
JMFN033C21+ GCAGATCTCTATCATGAAGCCGTCGGGGTCGTGAAAGAAAAGCTGATCCACGTAAATCCC
JMFF043G09+ GCAGATCTCTATCATGAAGCCGTCGGGGTCGTGAAAGAAAAGCTGATCCACGTAAATCCC
                      ____________________________________________________________
consensus GCAGATCTCTATCATGAAGCCGTCGGGGTCGTGAAAGAAAAGCTGATCCACGTAAATCCC
 
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rJMFF043G09- TCCTTCTTCCACCCTTTGCCTCACGTTCTGTATTTCCATATCCTTCAGCTTCTTCTCCAC
JMFN033C21+ TCCTTCTTCCACCCTTTGCCTCACGTTCTGTATTTCCATATCCTTCAGCTTCTTCTCCAC
JMFF043G09+ TCCTTCTTCCACCCTTTGCCTCACGTTCTGTATTTCCATATCCTTCAGCTTCTTCTCCAC
                      ____________________________________________________________
consensus TCCTTCTTCCACCCTTTGCCTCACGTTCTGTATTTCCATATCCTTCAGCTTCTTCTCCAC
 
. : . : . : . : . : . :
rJMFF043G09- TGCATCTATGCTCTCGCACTGGAAGGAGATATGGTTATCTTTGGGATTGATTTCGGTTTT
JMFN033C21+ TGCATCTATGCTCTCGCACTGGAAGGAGATATGGTTATCTTTGGGATTGATTTCGGTTTT
JMFF043G09+ TGCATCTATGCTCTCGCACTGGAAGGAGATATGGTTATCTTTGGGATTGATTTCGGTTTT
                      ____________________________________________________________
consensus TGCATCTATGCTCTCGCACTGGAAGGAGATATGGTTATCTTTGGGATTGATTTCGGTTTT
 
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rJMFF043G09- CTTTGGCAAATTCTCTGGGTCTTCAGATTGAAGGAGATGAATTCCAACTCCATAGCTAAA
JMFN033C21+ CTTTGGCAAATTCTCTGGGTCTTCAGATTGAAGGAGATGAATTCCAACTCCATAGCTAAA
JMFF043G09+ CTTTGGCAAATTCTCTGGGTCTTCAGATTGAAGGAGATGAATTCCAACTCCATAGCTAAA
                      ____________________________________________________________
consensus CTTTGGCAAATTCTCTGGGTCTTCAGATTGAAGGAGATGAATTCCAACTCCATAGCTAAA
 
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rJMFF043G09- CAGCC
JMFN033C21+ CAGCCAAGCTCCATCGAAATTGAAGGAACCGGGCCTTCTAACAGGGACAAAACCCAGAAT
JMFF043G09+ CAGCCAAGCTCCATCGAAATTGAGGGAACCGGGCCTTCTAACAGGGACAAAACCCAGAAT
                      ____________________________________________________________
consensus CAGCCAAGCTCCATCGAAATTGAGGGAACCGGGCCTTCTAACAGGGACAAAACCCAGAAT
 
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JMFN033C21+ GTTCTTGTAGAAATCGATCGATTCCTCCACCGATCTGCACACGATAGAGATGTGATTCAG
JMFF043G09+ GTTCTTGTAGAAATCGATCGATTCCTCCACCGATCTGCACACGATAGAGATGTGATTCAG
                      ____________________________________________________________
consensus GTTCTTGTAGAAATCGATCGATTCCTCCACCGATCTGCACACGATAGAGATGTGATTCAG
 
. : . : . : . : . : . :
JMFN033C21+ AGACTTGAGGGCCAATGGGTTTTCAGTATTTTCCTTCATTTTTGGCTTTTTCAAGATAAT
JMFF043G09+ AGACTTGAGGGCCAATGGGTTTTCAGTATTTTCCTTCATTTTTGGCTTTTTCAAGATAAT
                      ____________________________________________________________
consensus AGACTTGAGGGCCAATGGGTTTTCAGTATTTTCCTTCATTTTTGGCTTTTTCAAGATAAT
 
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JMFN033C21+ CTCGAGGAGTTTCAAGAAAACGGATGACTGCGAAGAGACGA
JMFF043G09+ CTCGAGGAGTTTCAAGAAAACGGATGACTGCGAAGAGACGATGAATAGGATGGAGTTTGA
                      ____________________________________________________________
consensus CTCGAGGAGTTTCAAGAAAACGGATGACTGCGAAGAGACGATGAATAGGATGGAGTTTGA