Contig 010301:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMFF043G09-                                                   ACCCTGGAGAGTTTTTTTT
                      ____________________________________________________________
consensus                                                      ACCCTGGAGAGTTTTTTTT
 
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rJMFF043G09-          TTTTTTTTCATACGCAACCAAATATAATTAGGGACTTTACTTTTACGAAACTAATGTCTT
                      ____________________________________________________________
consensus             TTTTTTTTCATACGCAACCAAATATAATTAGGGACTTTACTTTTACGAAACTAATGTCTT
 
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rJMFF043G09-          GTTAACACCAACACAAAACCAAACACACATAATAATCAAATACAATGATACGAGTATGCC
                      ____________________________________________________________
consensus             GTTAACACCAACACAAAACCAAACACACATAATAATCAAATACAATGATACGAGTATGCC
 
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rJMFF043G09-          TAAATCTCCATCTCATCTGATCTGTTCTTAGGTGAAGAGCAAGAAAAGATTTGGGTTGGG
JMFN033C21+                        CATCTGATCTGTTCTTAGGTGAAGAGCAAGAAAAGATTTGGGTTGGG
JMFF043G09+                                              AGAGCAAGAAAAGATNTGGGTTGGG
                      ____________________________________________________________
consensus             TAAATCTCCATCTCATCTGATCTGTTCTTAGGTGAAGAGCAAGAAAAGATTTGGGTTGGG
 
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rJMFF043G09-          GTGATGTAAAGTCTAGACATGAATGTGTTGGTGCTTAAATTGCATCATCTGGATATTGTG
JMFN033C21+           GTGATGTAGAGTCTAGACATGAATGTGTTGGTGCTTAGATTGCATCATCTGGATATTGTG
JMFF043G09+           GTGATGTAGAGTCTAGACATGAATGTGTTGGTGCTTAGATTGCATCATCTGGATATTGTG
                      ____________________________________________________________
consensus             GTGATGTAGAGTCTAGACATGAATGTGTTGGTGCTTAGATTGCATCATCTGGATATTGTG
 
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rJMFF043G09-          CCTGGAACATGACCTGGGCATCTCGCCGGCAAGAGGGACCACCGGAAGATTGTCGCAGTT
JMFN033C21+           CCTGGAACATGACCTGGGCATCTCGCCGGCAAGAGGGACCACCGGAAGATTGTCGCAGTT
JMFF043G09+           CCTGGAACATGACCTGGGCATCTCGCCGGCAAGAGGGACCACCGGAAGATTGTCGCAGTT
                      ____________________________________________________________
consensus             CCTGGAACATGACCTGGGCATCTCGCCGGCAAGAGGGACCACCGGAAGATTGTCGCAGTT
 
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rJMFF043G09-          GCAGATCTCTATCATGAAGCCGTCGGGGTCGTGAAAGAAAAGCTGATCCACGTAAATCCC
JMFN033C21+           GCAGATCTCTATCATGAAGCCGTCGGGGTCGTGAAAGAAAAGCTGATCCACGTAAATCCC
JMFF043G09+           GCAGATCTCTATCATGAAGCCGTCGGGGTCGTGAAAGAAAAGCTGATCCACGTAAATCCC
                      ____________________________________________________________
consensus             GCAGATCTCTATCATGAAGCCGTCGGGGTCGTGAAAGAAAAGCTGATCCACGTAAATCCC
 
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rJMFF043G09-          TCCTTCTTCCACCCTTTGCCTCACGTTCTGTATTTCCATATCCTTCAGCTTCTTCTCCAC
JMFN033C21+           TCCTTCTTCCACCCTTTGCCTCACGTTCTGTATTTCCATATCCTTCAGCTTCTTCTCCAC
JMFF043G09+           TCCTTCTTCCACCCTTTGCCTCACGTTCTGTATTTCCATATCCTTCAGCTTCTTCTCCAC
                      ____________________________________________________________
consensus             TCCTTCTTCCACCCTTTGCCTCACGTTCTGTATTTCCATATCCTTCAGCTTCTTCTCCAC
 
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rJMFF043G09-          TGCATCTATGCTCTCGCACTGGAAGGAGATATGGTTATCTTTGGGATTGATTTCGGTTTT
JMFN033C21+           TGCATCTATGCTCTCGCACTGGAAGGAGATATGGTTATCTTTGGGATTGATTTCGGTTTT
JMFF043G09+           TGCATCTATGCTCTCGCACTGGAAGGAGATATGGTTATCTTTGGGATTGATTTCGGTTTT
                      ____________________________________________________________
consensus             TGCATCTATGCTCTCGCACTGGAAGGAGATATGGTTATCTTTGGGATTGATTTCGGTTTT
 
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rJMFF043G09-          CTTTGGCAAATTCTCTGGGTCTTCAGATTGAAGGAGATGAATTCCAACTCCATAGCTAAA
JMFN033C21+           CTTTGGCAAATTCTCTGGGTCTTCAGATTGAAGGAGATGAATTCCAACTCCATAGCTAAA
JMFF043G09+           CTTTGGCAAATTCTCTGGGTCTTCAGATTGAAGGAGATGAATTCCAACTCCATAGCTAAA
                      ____________________________________________________________
consensus             CTTTGGCAAATTCTCTGGGTCTTCAGATTGAAGGAGATGAATTCCAACTCCATAGCTAAA
 
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rJMFF043G09-          CAGCC                                                       
JMFN033C21+           CAGCCAAGCTCCATCGAAATTGAAGGAACCGGGCCTTCTAACAGGGACAAAACCCAGAAT
JMFF043G09+           CAGCCAAGCTCCATCGAAATTGAGGGAACCGGGCCTTCTAACAGGGACAAAACCCAGAAT
                      ____________________________________________________________
consensus             CAGCCAAGCTCCATCGAAATTGAGGGAACCGGGCCTTCTAACAGGGACAAAACCCAGAAT
 
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JMFN033C21+           GTTCTTGTAGAAATCGATCGATTCCTCCACCGATCTGCACACGATAGAGATGTGATTCAG
JMFF043G09+           GTTCTTGTAGAAATCGATCGATTCCTCCACCGATCTGCACACGATAGAGATGTGATTCAG
                      ____________________________________________________________
consensus             GTTCTTGTAGAAATCGATCGATTCCTCCACCGATCTGCACACGATAGAGATGTGATTCAG
 
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JMFN033C21+           AGACTTGAGGGCCAATGGGTTTTCAGTATTTTCCTTCATTTTTGGCTTTTTCAAGATAAT
JMFF043G09+           AGACTTGAGGGCCAATGGGTTTTCAGTATTTTCCTTCATTTTTGGCTTTTTCAAGATAAT
                      ____________________________________________________________
consensus             AGACTTGAGGGCCAATGGGTTTTCAGTATTTTCCTTCATTTTTGGCTTTTTCAAGATAAT
 
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JMFN033C21+           CTCGAGGAGTTTCAAGAAAACGGATGACTGCGAAGAGACGA                   
JMFF043G09+           CTCGAGGAGTTTCAAGAAAACGGATGACTGCGAAGAGACGATGAATAGGATGGAGTTTGA
                      ____________________________________________________________
consensus             CTCGAGGAGTTTCAAGAAAACGGATGACTGCGAAGAGACGATGAATAGGATGGAGTTTGA