Contig 010300:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF043F22Sequence590010300 (2)ref|XP_011069556.1|7e-102PREDICTED: prolyl-tRNA synthetase associated domain-containing protein 1 [Sesam600008394 (2)ref|XP_006363902.1|9e-31PREDICTED: prolyl-tRNA synthetase associated domain-containing protein 1-like [
JMFF050L11Sequence635010300 (2)ref|XP_011069556.1|3e-108PREDICTED: prolyl-tRNA synthetase associated domain-containing protein 1 [Sesam622008394 (2)ref|XP_006363902.1|9e-31PREDICTED: prolyl-tRNA synthetase associated domain-containing protein 1-like [

Alignment

This contig is upended


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JMFF050L11+                             TTTTCAGNGTACATCTGGTAGGACTATGCATCNAGATGGAAC
                      ____________________________________________________________
consensus                               TTTTCAGNGTACATCTGGTAGGACTATGCATCNAGATGGAAC
 
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JMFF050L11+           AAGGGCAGCTAGATCAGGAGGTTGATCCTTTCCAATTGGAGGATTAGCCTCCAGATCAAC
JMFF043F22+                                     CCTTTCCAATTGGAGGATTAGCCTCCAGATCAAC
                      ____________________________________________________________
consensus             AAGGGCAGCTAGATCAGGAGGTTGATCCTTTCCAATTGGAGGATTAGCCTCCAGATCAAC
 
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JMFF050L11+           ATAGGCGGGAGTTTTTCCAATTGAATTTAAAAACTTGTCAAGGTCACGGGCATTAAGAGC
JMFF043F22+           ATAGGCGGGAGTTTTTCCAATTGAATTTAAAAACTTGTCAAGGTCACGGGCATTAAGAGC
                      ____________________________________________________________
consensus             ATAGGCGGGAGTTTTTCCAATTGAATTTAAAAACTTGTCAAGGTCACGGGCATTAAGAGC
 
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JMFF050L11+           AATTGATGTATCATTTGAGAGTGGATGGAAGATGCAACGTTCTTGAGTCTTAAGCCCTTG
JMFF043F22+           AATTGATGTATCATTTGAGAGTGGATGGAAGATGCAACGTTCTTGAGTCTTAAGCCCTTG
                      ____________________________________________________________
consensus             AATTGATGTATCATTTGAGAGTGGATGGAAGATGCAACGTTCTTGAGTCTTAAGCCCTTG
 
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JMFF050L11+           ATCTAACACCAAAGAAACATGCCTTGCTGATTCATTTACAAGTGCAAAAGGAGTAACAGA
JMFF043F22+           ATCTAACACCAAAGAAACATGCCTTGCTGATTCATTTACAAGTGCAAAAGGAGTAACAGA
                      ____________________________________________________________
consensus             ATCTAACACCAAAGAAACATGCCTTGCTGATTCATTTACAAGTGCAAAAGGAGTAACAGA
 
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JMFF050L11+           ACCAAGTGGCACCTGAAGGACTTCTGTAAAGGCTTCTTCAGGTGCCATTCTTAGACCTCC
JMFF043F22+           ACCAAGTGGCACCTGAAGGACTTCTGTAAAGGCTTCTTCAGGTGCCATTCTTAGACCTCC
                      ____________________________________________________________
consensus             ACCAAGTGGCACCTGAAGGACTTCTGTAAAGGCTTCTTCAGGTGCCATTCTTAGACCTCC
 
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JMFF050L11+           CTTCCCCAAACCAAGCCTCTGAGACAAAACTTTCAGATCTACTTTGGTCTCTGACAGAGC
JMFF043F22+           CTTCCCCAAACCAAGCCTTTGAGACAAAACTTTCAGATCTACTTTGGTCTCTGACAGAGC
                      ____________________________________________________________
consensus             CTTCCCCAAACCAAGCCTTTGAGACAAAACTTTCAGATCTACTTTGGTCTCTGACAGAGC
 
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JMFF050L11+           AGAAACAATATAAAATCTATTTTTCTTGTCCTTCAAGAATAGGTTCTTGCACAGTGCACC
JMFF043F22+           AGAAACAATATAAAATCTATTTTTCTTGTCCTTCAAGAATAGGTTCTTGCACAGTGCACC
                      ____________________________________________________________
consensus             AGAAACAATATAAAATCTATTTTTCTTGTCCTTCAAGAATAGGTTCTTGCACAGTGCACC
 
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JMFF050L11+           TTTTATATTCCCAACATATTTTGCCTGAGCTTCAACTGTCATAACAACAGGGTGGTCACA
JMFF043F22+           TTTTATATTCCCAACATATTTTGCCTGAGCTTCAACTGTCATAACAACAGGGTGGTCACA
                      ____________________________________________________________
consensus             TTTTATATTCCCAACATATTTTGCCTGAGCTTCAACTGTCATAACAACAGGGTGGTCACA
 
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JMFF050L11+           CCTGGCGAAATCAATTTGCAGCTCCTGCAAACGAGCGAGCAATTGCTCCTTGGAATGGGC
JMFF043F22+           CCTGGCGAAATCAATTTGCAGCTCCTGCAAACGAGCGAGCAATTGCTCCTTGGAATGGGC
                      ____________________________________________________________
consensus             CCTGGCGAAATCAATTTGCAGCTCCTGCAAACGAGCGAGCAATTGCTCCTTGGAATGGGC
 
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JMFF050L11+           CATTCTATCTCCTTCGTCCTTCAAAGTTTTTCTCGGAATCACAGGGAGCTATT       
JMFF043F22+           CATTCTATCTCCTTCGTCCTTCAAAGTTTTTCTCGGAATCACAGGGAGCTATTGACGTCC
                      ____________________________________________________________
consensus             CATTCTATCTCCTTCGTCCTTCAAAGTTTTTCTCGGAATCACAGGGAGCTATTGACGTCC