Contig 010290:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMFF041K14-                                                           ATAATGAATGC
                      ____________________________________________________________
consensus                                                              ATAATGAATGC
 
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rJMFF041K14-          ACAAAATCAAAATGATTATTCAGCAAACTTGAAACATTAAAAAATGCTTACATTCAGCTA
rJMSF024E02-                                                             ATTCAGCTA
                      ____________________________________________________________
consensus             ACAAAATCAAAATGATTATTCAGCAAACTTGAAACATTAAAAAATGCTTACATTCAGCTA
 
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rJMFF041K14-          TAGAAGCATTGAGTAAAAAAGGAATTAAGCCAAGAATACAACATTGGGCTACAAATATTA
rJMSF024E02-          TAGAAGCATTGAGTAAAAAAGGAATTAAGCCAAGAATACAACATTGGGCTACAAATATTA
                      ____________________________________________________________
consensus             TAGAAGCATTGAGTAAAAAAGGAATTAAGCCAAGAATACAACATTGGGCTACAAATATTA
 
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rJMFF041K14-          TTGATTTTGGAGTGAGAGTTGGTATCTTTACTGCACAGATGTGGACTTTCCAGTAGGTAT
rJMSF024E02-          TTGATTTTGGAGTGAGAGTTGGTATCTTTACTGCACAGATGTGGACTTTCCAGTAGGTAT
                      ____________________________________________________________
consensus             TTGATTTTGGAGTGAGAGTTGGTATCTTTACTGCACAGATGTGGACTTTCCAGTAGGTAT
 
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rJMFF041K14-          CTGTAAGAATTAGTGTATGTTCAATTTCATGAACTTCTAAAATATTGAACTAACTGGGTT
rJMSF024E02-          CTGTAAGAATTAGTGTATGTTCAATTTCATGAACTTCTAAAATATTGAACTAACTGTGTT
                      ____________________________________________________________
consensus             CTGTAAGAATTAGTGTATGTTCAATTTCATGAACTTCTAAAATATTGAACTAACTGTGTT
 
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rJMFF041K14-          TTTATCCTTTCCCCTTCTTCCTGGCACTGTCAAAACACAACAGTCTTGTTTCTCTCATAA
rJMSF024E02-          TTTATCCTTTCCCCTTCTTCCTGGCACTGTCAAAACACAACAGTCTTGTTTCTCTCATAA
                      ____________________________________________________________
consensus             TTTATCCTTTCCCCTTCTTCCTGGCACTGTCAAAACACAACAGTCTTGTTTCTCTCATAA
 
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rJMFF041K14-          GGTAAAACACGCAATTCACAGTATGACTTTATTGCTTTAGCAAGACACCGTT        
rJMSF024E02-          GGTAAAACACGCAATTCACAGTATGACTTTATTGCTTTAGCAAGACACCGTTTCTCAAGT
                      ____________________________________________________________
consensus             GGTAAAACACGCAATTCACAGTATGACTTTATTGCTTTAGCAAGACACCGTTTCTCAAGT
 
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rJMSF024E02-          TCCTCAGACCTCTGTACAAAACTCCGCAGATTGTCTCTATGGGAAACTCTTTCAACCTGG
                      ____________________________________________________________
consensus             TCCTCAGACCTCTGTACAAAACTCCGCAGATTGTCTCTATGGGAAACTCTTTCAACCTGG
 
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rJMSF024E02-          AATGATATAAAAAGCCCTATATAATTGCCATACCATGCAAATTCACCATCTGTTCAATGA
                      ____________________________________________________________
consensus             AATGATATAAAAAGCCCTATATAATTGCCATACCATGCAAATTCACCATCTGTTCAATGA
 
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rJMSF024E02-          TTGGCCCACAATCAAGTTCTTCAGAGACAAAGTGAGTTGTTGCACCAATCAATTTAACAC
                      ____________________________________________________________
consensus             TTGGCCCACAATCAAGTTCTTCAGAGACAAAGTGAGTTGTTGCACCAATCAATTTAACAC
 
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rJMSF024E02-          CAGCATCAAAGGCCTGCCTAGCTGGCTTCCCACCCTTAAATGATGGAAGCAGGCCATGAT
                      ____________________________________________________________
consensus             CAGCATCAAAGGCCTGCCTAGCTGGCTTCCCACCCTTAAATGATGGAAGCAGGCCATGAT
 
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rJMSF024E02-          GAATGTTTATAATGTCTTTCTTATATTTGCTCAAAAAGTCTCCAGACAGTATCTGCATGT
JMSF024E02+                                                GTCTCCAGACAGTATCTGCATGT
                      ____________________________________________________________
consensus             GAATGTTTATAATGTCTTTCTTATATTTGCTCAAAAAGTCTCCAGACAGTATCTGCATGT
 
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rJMSF024E02-          ATCTTGCAAGGACTAAAAAGTCAGTGTCCTGAACTAATTCCAAGATCTCTCCTTCTCTTT
JMSF024E02+           ATCTTGCAAGGACTAAAAAGTCAGTGTCCTGAACTAATTCCAAGATCTCTCCTTCTCTTT
                      ____________________________________________________________
consensus             ATCTTGCAAGGACTAAAAAGTCAGTGTCCTGAACTAATTCCAAGATCTCTCCTTCTCTTT
 
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rJMSF024E02-          TATTATCATTACCGGTATGCAAGTAATGATATGGAATTCCATGTCTTTCAAGAAATCGAA
JMSF024E02+           TATTATCATTACCGGTATGCAAGTAATGATATGGAATTCCATGTCTTTCAAGAAATCGAA
JMFF041K14+                           ATGCAAGTAATGATATGGAATTCCATGTCTTTCAAGAAATCGAA
                      ____________________________________________________________
consensus             TATTATCATTACCGGTATGCAAGTAATGATATGGAATTCCATGTCTTTCAAGAAATCGAA
 
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rJMSF024E02-          TCACATGGGTGTTTGAACTCCTATCANGATTACTAATT                      
JMSF024E02+           TCACATGGGTGTTTGAACTTCTATCATGATTACTAATTACACAAGTTATTTGAACAGGAA
JMFF041K14+           TCACATGGGTGTTTGAACTTCTATCATGATTACTAATTACACAAGTTATTTGAACAGGAA
                      ____________________________________________________________
consensus             TCACATGGGTGTTTGAACTTCTATCATGATTACTAATTACACAAGTTATTTGAACAGGAA
 
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JMSF024E02+           GCCTTCCATCCTGCCACCCATGCAGTAAATCTACAAGACAGTGGTCCTGCTTTGATGCAA
JMFF041K14+           GCCTTCCATCCTGCCACCCATGCAGTAAATCTACAAGACAGTGGTCCTGCTTTGATGCAA
                      ____________________________________________________________
consensus             GCCTTCCATCCTGCCACCCATGCAGTAAATCTACAAGACAGTGGTCCTGCTTTGATGCAA
 
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JMSF024E02+           GAACAGCAATCTTATACTTTGGATCCATAGTAGGCACTCGAACGACAGACGTCATTGCAT
JMFF041K14+           GAACAGCAATCTTATACTTTGGATCCATAGTAGGCACTCGAACGACAGACGTCATTGCAT
                      ____________________________________________________________
consensus             GAACAGCAATCTTATACTTTGGATCCATAGTAGGCACTCGAACGACAGACGTCATTGCAT
 
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JMSF024E02+           TAAACATCTTTGATAGCTTTAGGAAGTCCACATCCATTTGGCCTCGTGGCCATTTAGCAG
JMFF041K14+           TAAACATCTTTGATAGCTTTAGGAAGTCCACATCCATTTGGCCTCGTGGCCATTTAGCAG
                      ____________________________________________________________
consensus             TAAACATCTTTGATAGCTTTAGGAAGTCCACATCCATTTGGCCTCGTGGCCATTTAGCAG
 
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JMSF024E02+           GATTAAACACAAATTCACTTCTTGAGTAAAAGACATGCTTATCTTCCGGCACGAAGACAT
JMFF041K14+           GATTAAACACAAATTCACTTCTTGAGTAAAAGACATGCTTATCTTCCGGCACGAAGACAT
                      ____________________________________________________________
consensus             GATTAAACACAAATTCACTTCTTGAGTAAAAGACATGCTTATCTTCCGGCACGAAGACAT
 
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JMSF024E02+           CAGCATTGAGGATATTTCCACCCCTGGAAGCAATGCAATCCGATAGCTTTGCAACTATCC
JMFF041K14+           CAGCATTGAGGATATTTCCACCCCTGGAAGCAATGCAATCCGATAGCTTTGCAACTATCC
                      ____________________________________________________________
consensus             CAGCATTGAGGATATTTCCACCCCTGGAAGCAATGCAATCCGATAGCTTTGCAACTATCC
 
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JMSF024E02+           CCACTTCATCGGGGCAGTGGAAAACGTGAATTCCATGGATGAGGGAAGGAGAGGTGGAGC
JMFF041K14+           CCACTTCATCGGGGCAGTGGAAAACGTGAATTCCATGGATGAGGGAAGGAGAGGTGGAGC
                      ____________________________________________________________
consensus             CCACTTCATCGGGGCAGTGGAAAACGTGAATTCCATGGATGAGGGAAGGAGAGGTGGAGC
 
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JMSF024E02+           AGTCGAGGGACTCGCCGGCGACATTCAGAGATCCGAACGGCCGATTTGTAAACCCAAAAA
JMFF041K14+           AGTCGAGGGACTCGCCGGCGACATTCAGAGATCCGAACGGCCGATTTGTAAACCCAAAAA
                      ____________________________________________________________
consensus             AGTCGAGGGACTCGCCGGCGACATTCAGAGATCCGAACGGCCGATTTGTAAACCCAAAAA
 
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JMSF024E02+           CTTTGGGAGGTAGGCCGGAAGAGAATACCGCTCTGCGGAGGAGGAGGGGGAGGCTCATTT
JMFF041K14+           CTTTGGGAGGTAGGCCGGAAGAGAATACCGCTCTGCGGAGGAGGAGGGGGAGGCTCATTT
                      ____________________________________________________________
consensus             CTTTGGGAGGTAGGCCGGAAGAGAATACCGCTCTGCGGAGGAGGAGGGGGAGGCTCATTT
 
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JMSF024E02+           CTACGCCTCCTCCCTCACGGGAGAT                                   
JMFF041K14+           ATACGCCTCCTCCCTCACGGGAGATGTGAGTGTATAATTTTTCCAGTTTTTTCTCTTAAC
                      ____________________________________________________________
consensus             CTACGCCTCCTCCCTCACGGGAGATGTGAGTGTATAATTTTTCCAGTTTTTTCTCTTAAC