| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF004F16 | Sequence | 372 | 010289 (22) | ref|XP_009784813.1| | 7e-26 | PREDICTED: thioredoxin F-type, chloroplastic-like [Nicotiana sylvestris] gb|ADQ | 706 | 010289 (22) | emb|CDP04188.1| | 3e-63 | unnamed protein product [Coffea canephora] |
| JMFF005E11 | Sequence | 501 | 010289 (22) | ref|XP_009784813.1| | 3e-59 | PREDICTED: thioredoxin F-type, chloroplastic-like [Nicotiana sylvestris] gb|ADQ | 679 | 010289 (22) | ref|XP_009784813.1| | 5e-71 | PREDICTED: thioredoxin F-type, chloroplastic-like [Nicotiana sylvestris] gb|ADQ |
| JMFF005E12 | Sequence | 444 | 010289 (22) | ref|XP_002277021.2| | 6e-55 | PREDICTED: thioredoxin F-type, chloroplastic [Vitis vinifera] | |||||
| JMFF022F21 | Sequence | 499 | 010289 (22) | ref|XP_009784813.1| | 1e-59 | PREDICTED: thioredoxin F-type, chloroplastic-like [Nicotiana sylvestris] gb|ADQ | 699 | 010289 (22) | ref|XP_009784813.1| | 7e-71 | PREDICTED: thioredoxin F-type, chloroplastic-like [Nicotiana sylvestris] gb|ADQ |
| JMFF038E11 | Sequence | 501 | 010289 (22) | ref|XP_009784813.1| | 3e-59 | PREDICTED: thioredoxin F-type, chloroplastic-like [Nicotiana sylvestris] gb|ADQ | 704 | 010289 (22) | ref|XP_009784813.1| | 7e-71 | PREDICTED: thioredoxin F-type, chloroplastic-like [Nicotiana sylvestris] gb|ADQ |
| JMFF041G19 | Sequence | 649 | 010289 (22) | ref|XP_009784813.1| | 4e-71 | PREDICTED: thioredoxin F-type, chloroplastic-like [Nicotiana sylvestris] gb|ADQ | |||||
| JMFF050I10 | Sequence | 614 | 010289 (22) | ref|XP_009784813.1| | 2e-71 | PREDICTED: thioredoxin F-type, chloroplastic-like [Nicotiana sylvestris] gb|ADQ | 584 | 010289 (22) | emb|CDP04188.1| | 1e-65 | unnamed protein product [Coffea canephora] |
| JMFN015H07 | Sequence | 632 | 010289 (22) | ref|XP_009784813.1| | 3e-71 | PREDICTED: thioredoxin F-type, chloroplastic-like [Nicotiana sylvestris] gb|ADQ | |||||
| JMFN025K11 | Sequence | 648 | 010289 (22) | ref|XP_009784813.1| | 2e-67 | PREDICTED: thioredoxin F-type, chloroplastic-like [Nicotiana sylvestris] gb|ADQ | |||||
| JMFN030O04 | Sequence | 407 | 010289 (22) | ref|XP_002277021.2| | 2e-46 | PREDICTED: thioredoxin F-type, chloroplastic [Vitis vinifera] | |||||
| JMFS061C06 | Sequence | 627 | 010289 (22) | ref|XP_009784813.1| | 3e-71 | PREDICTED: thioredoxin F-type, chloroplastic-like [Nicotiana sylvestris] gb|ADQ | |||||
| JMSF007L05 | Sequence | 410 | 010289 (22) | ref|XP_009784813.1| | 1e-37 | PREDICTED: thioredoxin F-type, chloroplastic-like [Nicotiana sylvestris] gb|ADQ | 681 | 010289 (22) | ref|XP_009784813.1| | 5e-71 | PREDICTED: thioredoxin F-type, chloroplastic-like [Nicotiana sylvestris] gb|ADQ |
| JMSF012N07 | Sequence | 443 | 010289 (22) | ref|XP_009784813.1| | 9e-47 | PREDICTED: thioredoxin F-type, chloroplastic-like [Nicotiana sylvestris] gb|ADQ | 662 | 010289 (22) | ref|XP_009784813.1| | 4e-71 | PREDICTED: thioredoxin F-type, chloroplastic-like [Nicotiana sylvestris] gb|ADQ |
| JMSF043I19 | Sequence | 752 | 010289 (22) | ref|XP_009784813.1| | 1e-70 | PREDICTED: thioredoxin F-type, chloroplastic-like [Nicotiana sylvestris] gb|ADQ | 744 | 010289 (22) | ref|XP_009784813.1| | 1e-70 | PREDICTED: thioredoxin F-type, chloroplastic-like [Nicotiana sylvestris] gb|ADQ |
This contig is upended
. : . : . : . : . : . :
rJMSF043I19- TCCATCCAGAATATGAGA
JMSF043I19+ ATTAGACCATGTCACCAACTTCCATCCAGAATATGAGA
____________________________________________________________
consensus ATTAGACCATGTCACCAACTTCCATCCAGAATATGAGA
. : . : . : . : . : . :
rJMSF043I19- ACCATGGCTAAAGGTTTTCCTTATCAAATTATTTGTCACTATACACAAAAAACAAAACTA
JMFN025K11+ TTCCTTATCAAATTATTTGTCACTATACACAAAAAACAAAACTA
rJMFF022F21- TTTTCCTTATCAAATTATTTGTCACTATACACAAAAAACAAAACTA
JMFS061C06+ CAAAACTA
JMFN030O04+ GCTAAAGGTTTTCCTTATCAAATTATTTGTCACTATACACAAAAAACAAAACTA
JMSF043I19+ ACCATGGCTAAAGGTTTTCCTTATCAAATTATTTGTCACTATACACAAAAAACAAAACTA
rJMFF038E11- AATTATTTGTCACTATACACAAAAAACAAAACTA
rJMSF007L05- TCACTATACACAAAAAACAAAACTA
rJMSF012N07- AAACTA
JMFN015H07+ AAACTA
rJMFF004F16- GTTTTCCTTATCAAATTATTTGTCACTATACACAAAAAACAAAACTA
____________________________________________________________
consensus ACCATGGCTAAAGGTTTTCCTTATCAAATTATTTGTCACTATACACAAAAAACAAAACTA
. : . : . : . : . : . :
rJMSF043I19- GAAAGAGTACAATTTATTACACATCATATTCATGCCAGTAGATTTCATTATGAACAAATT
rJMFF050I10- GAGTACAATTTATTACACATCATATTCATGCCAGTAGATTTCATTATGAACAAATT
rJMFF005E12- GATTTCATTATGAACAAATT
JMFN025K11+ GAAAGAGTACAATTTATTACACATCATATTCATGCCAGTAGATTTCATTATGAACAAATT
rJMFF022F21- GAAAGAGTACAATTTATTACACATCATATTCATGCCAGTAGATTTCATTATGAACAAATT
JMFS061C06+ GAAAGAGTACAATTTATTACACATCATATTCATGCCAGTAGATTTCATTATGAACAAATT
JMFF050I10+ ATGCCAGTAGATTTCATTATGAACAAATT
JMFN030O04+ GAAAGAGTACAATTTATTACACATCATATTCATGCCAGTAGATTTCATTATGAACAAATT
JMSF043I19+ GAAAGAGTACAATTTATTACACATCATATTCATGCCAGTAGATTTCATTATGAACAAATT
rJMFF038E11- GAAAGAGTACAATTTATTACACATCATATTCATGCCAGTAGATTTCATTATGAACAAATT
rJMSF007L05- GAAAGAGTACAATTTATTACACATCATATTCATGCCAGTAGATTTCATTATGAACAAATT
rJMFF005E11- ACAATTTATTACACATCATATTCATGCCAGTAGATTTCATTATGAACAAATT
rJMSF012N07- GAAAGAGTACAATTTATTACACATCATATTCATGCCAGTAGATTTCATTATGAACAAATT
JMFN015H07+ GAAAGAGTACAATTTATTACACATCATATTCATGCCAGTAGATTTCATTATGAACAAATT
rJMFF004F16- GAAAGAGTACAATTTATTACACATCATATTCATGCCAGTAGATTTCATTATGAACAAATT
JMFF041G19+ AATTTATTACACATCATATTCATGCCAGTAGATTTCATTATGAACAAATT
____________________________________________________________
consensus GAAAGAGTACAATTTATTACACATCATATTCATGCCAGTAGATTTCATTATGAACAAATT
. : . : . : . : . : . :
rJMSF043I19- GTGCAAAGCATACGACGAAAGAATTCTAGCCTGACCTTGCACACTCGATGGCCGCTATTA
rJMFF050I10- GTGCAAAGCATACGACGAAAGAATTCTAGCCTGACCTTGCACACTCGATGGCCGCTATTA
rJMFF005E12- GTGCAAAGCATACGACGAAAGAATTCTAGCCTGACCTTGCACACTCGATGGCCGCTATTA
JMFN025K11+ GTGCAAAGCATACGACGAAAGAATTCTAGCCTGACCTTGCACACTCGATGGCCGCTATTA
rJMFF022F21- GTGCAAAGCATACGACGAAAGAATTCTAGCCTGACCTTGCACACTCGATGGCCGCTATTA
JMFS061C06+ GTGCAAAGCATACGACGAAAGAATTCTAGCCTGACCTTGCACACTCGATGGCCGCTATTA
JMFF050I10+ GTGCAAAGCATACGACGAAAGAATTCTAGCCTGACCTTGCACACTCGATGGCCGCTATTA
JMFN030O04+ GTGCAAAGCATACGACGAAAGAATTCTAGCCTGACCTTGCACACTCGATGGCCGCTATTA
JMSF043I19+ GTGCAAAGCATACGACGAAAGAATTCTAGCCTGACCTTGCACACTCGATGGCCGCTATTA
rJMFF038E11- GTGCAAAGCATACGACGAAAGAATTCTAGCCTGACCTTGCACACTCGATGGCCGCTATTA
rJMSF007L05- GTGCAAAGCATACGACGAAAGAATTCTAGCCTGACCTTGCACACTCGATGGCCGCTATTA
rJMFF005E11- GTGCAAAGCATACGACGAAAGAATTCTAGCCTGACCTTGCACACTCGATGGCCGCTATTA
rJMSF012N07- GTGCAAAGCATACGACGAAAGAATTCTAGCCTGACCTTGCACACTCGATGGCCGCTATTA
JMFN015H07+ GTGCAAAGCATACGACGAAAGAATTCTAGCCTGACCTTGCACACTCGATGGCCGCTATTA
rJMFF004F16- GTGCAAAGCATACGACGAAAGAATTCTAGCCTGACCTTGCACACTCGATGGCCGCTATTA
JMFF041G19+ GTGCAAAGCATACGACGAAAGAATTCTAGCCTGACCTTGCACACTCGATGGCCGCTATTA
____________________________________________________________
consensus GTGCAAAGCATACGACGAAAGAATTCTAGCCTGACCTTGCACACTCGATGGCCGCTATTA
. : . : . : . : . : . :
rJMSF043I19- AATCATCTAATTTCGCTCCGGTCACTTCTTTGACTATCTTGCCAGACTTCAGAATCTTGA
rJMFF050I10- AATCATCTAATTTCGCTCCGGTCACTTCTTTGACTATCTTGCCAGACTTCAGAATCTTGA
rJMFF005E12- AATCATCTAATTTCGCTCCGGTCACTTCTTTGACTATCTTGCCAGACTTCANAATCTTGA
JMFN025K11+ AATCATCTAATTTCGCTCCGGTCACTTCTTTGACTATCTTGCCAGACTTCAGAATCTTGA
rJMFF022F21- AATCATCTAATTTCGCTCCGGTCACTTCTTTGACTATCTTGCCAGACTTCAGAATCTTGA
JMFS061C06+ AATCATCTAATTTCGCTCCGGTCACTTCTTTGACTATCTTGCCAGACTTCAGAATCTTGA
JMFF050I10+ AATCATCTAATTTCGCTCCGGTCACTTCTTTGACTATCTTGCCAGACTTCAGAATCTTGA
JMFF022F21+ TATCTTGCCAGACTTCAGAATCTTGA
JMFN030O04+ AATCATCTAATTTCGCTCCGGTCACTTCTTTGACTATCTTGCCAGACTTCAGAATCTTGA
JMSF043I19+ AATCATCTAATTTCGCTCCGGTCACTTCTTTGACTATCTTGCCAGACTTCAGAATCTTGA
JMFF005E11+ TCTTGCCAGACTTCAGAATCTTGA
rJMFF038E11- AATCATCTAATTTCGCTCCGGTCACTTCTTTGACTATCTTGCCAGACTTCAGAATCTTGA
rJMSF007L05- AATCATCTAATTTCGCTCCGGTCACTTCTTTGACTATCTTGCCAGACTTCAGAATCTTGA
rJMFF005E11- AATCATCTAATTTCGCTCCGGTCACTTCTTTGACTATCTTGCCAGACTTCAGAATCTTGA
rJMSF012N07- AATCATCTAATTTCGCTCCGGTCACTTCTTTGACTATCTTGCCAGACTTCAGAATCTTGA
JMFN015H07+ AATCATCTAATTTCGCTCCGGTCACTTCTTTGACTATCTTGCCAGACTTCAGAATCTTGA
rJMFF004F16- AATCATCTAATTTCGCTCCGGTCACTTCTTTGACTATCTTGCCAGACTTCAGAATCTTGA
JMFF038E11+ CTTGCCAGACTTCAGAATCTTGA
JMFF041G19+ AATCATCTAATTTCGCTCCGGTCACTTCTTTGACTATCTTGCCAGACTTCAGAATCTTGA
____________________________________________________________
consensus AATCATCTAATTTCGCTCCGGTCACTTCTTTGACTATCTTGCCAGACTTCAGAATCTTGA
. : . : . : . : . : . :
rJMSF043I19- ATGTAGGAACCACCTTTATGCCTAGCTCCTTTGCTAATGGCCTGTTATCCTGGTTGCAAT
rJMFF050I10- ATGTAGGAACCACCTTTATGCCTAGCTCCTTTGCTAATGGCCTGTTATCCTGGTTGCAAT
rJMFF005E12- ATGTAGGAACCACCTTTATGCCTANCTCCTTTGCTAATGGCCTGTTATCCTGGTTGCAAT
JMFN025K11+ ATGTAGGAACCACCTTTATGCCTAGCTCCTTTGCTAATGGCCTGTTATCCTGGTTGCAAT
rJMFF022F21- ATGTAGGAACCACCTTTATGCCTAGCTCCTTTGCTAATGGCCTGTTATCCTGGTTGCAAT
JMFS061C06+ ATGTAGGAACCACCTTTATGCCTAGCTCCTTTGCTAATGGCCTGTTATCCTGGTTGCAAT
JMFF050I10+ ATGTAGGAACCACCTTTATGCCTAGCTCCTTTGCTAATGGCCTGTTATCCTGGTTGCAAT
JMFF022F21+ ATGTAGGAACCACCTTTATGCCTAGCTCCTTTGCTAATGGCCTGTTATCCTGGTTGCAAT
JMFN030O04+ ATGTAGGAACCACCTTTATGCCTAGCTCCTTTGCTAATGGCCTGTTATCCTGGTTGCAAT
JMSF043I19+ ATGTAGGAACCACCTTTATGCCTAGCTCCTTTGCTAATGGCCTGTTATCCTGGTTGCAAT
JMFF005E11+ ATGTAGGAACCACCTTTATGCCTAGCTCCTTTGCTAATGGCCTGTTATCCTGGTTGCAAT
rJMFF038E11- ATGTAGGAACCACCTTTATGCCTAGCTCCTTTGCTAATGGCCTGTTATCCTGGTTGCAAT
rJMSF007L05- ATGTAGGAACCACCTTTATGCCTAGCTCCTTTGCTAATGGCCTGTTATCCTGGTTGCAAT
rJMFF005E11- ATGTAGGAACCACCTTTATGCCTAGCTCCTTTGCTAATGGCCTGTTATCCTGGTTGCAAT
JMSF012N07+ CTAATGGCCTGTTATCCTGGTTGCAAT
rJMSF012N07- ATGTAGGAACCACCTTTATGCCTAGCTCCTTTGCTAATGGCCTGTTATCCTGGTTGCAAT
JMFN015H07+ ATGTAGGAACCACCTTTATGCCTAGCTCCTTTGCTAATGGCCTGTTATCCTGGTTGCAAT
rJMFF004F16- ATGTAGGAACCACCTTTATGCCTAGCTCCTTTGCTAATGGCCTGTTATCCTGGTTGCAAT
JMFF038E11+ ATGTAGGAACCACCTTTATGCCTAGCTCCTTTGCTAATGGCCTGTTATCCTGGTTGCAAT
JMFF041G19+ ATGTAGGAACCACCTTTATGCCTAGCTCCTTTGCTAATGGCCTGTTATCCTGGTTGCAAT
____________________________________________________________
consensus ATGTAGGAACCACCTTTATGCCTAGCTCCTTTGCTAATGGCCTGTTATCCTGGTTGCAAT
. : . : . : . : . : . :
rJMSF043I19- CCAACTTAAGAAAGACAACATCAAGATACTTTGCAGACAGTTCTTCATACTTGGGAGCCA
rJMFF050I10- CCAACTTAAGAAAGACAACATCAAGATACTTTGCAGACAGTTCTTCATACTTGGGAGCCA
rJMFF005E12- CCNACTTAANAAAGACAACNTCAANATACTTTGCAGACAGTTCTTCATACTTGGGAGCCA
JMFN025K11+ CCAACTTAAGAAAGACAACATCAAGATACTTTGCAGACAGTTCTTCATACTTGGGAGCCA
rJMFF022F21- CCAACTTAAGAAAGACAACATCAAGATACTTTGCAGACAGTTCTTCATACTTGGGAGCCA
JMFS061C06+ CCAACTTAAGAAAGACAACATCAAGATACTTTGCAGACAGTTCTTCATACTTGGGAGCCA
JMFF050I10+ CCAACTTAAGAAAGACAACATCAAGATACTTTGCAGACAGTTCTTCATACTTGGGAGCCA
JMFF022F21+ CCAACTTAAGAAAGACAACATCAAGATACTTTGCAGACAGTTCTTCATACTTGGGAGCCA
JMFN030O04+ CCAACTTAAGAAAGACAACATCAAGATACTTTGCAGACAGTTCTTCATACTTGGGAGCCA
JMSF043I19+ CCAACTTAAGAAAGACAACATCAAGATACTTTGCAGACAGTTCTTCATACTTGGGAGCCA
JMFF005E11+ CCAACTTAAGAAAGACAACATCAAGATACTTTGCAGACAGTTCTTCATACTTGGGAGCCA
rJMFF038E11- CCAACTTAAGAAAGACAACATCAAGATACTTTGCAGACAGTTCTTCATACTTGGGAGCCA
rJMSF007L05- CCAACTTAAGAAAGACAACATCAAGATACTTTGCAGACAGTTCTTCATACTTGGGAGCCA
rJMFF005E11- CCAACTTAAGAAAGACAACATCAAGATACTTTGCAGACAGTTCTTCATACTTGGGAGCCA
JMSF012N07+ CCAACTTAAGAAAGACAACATCAAGATACTTTGCAGACAGTTCTTCATACTTGGGAGCCA
JMSF007L05+ TAAGAAAGACAACATCAAGATACTTTGCAGACAGTTCTTCATACTTGGGAGCCA
rJMSF012N07- CCAACTTAAGAAAGACAACATCAAGATACTTTGCAGACAGTTCTTCATACTTGGGAGCCA
JMFN015H07+ CCAACTTAAGAAAGACAACATCAAGATACTTTGCAGACAGTTCTTCATACTTGGGAGCCA
rJMFF004F16- CCAACTTAAGAAAGACAACATCAAGATACTTTGCAGACAGTTCTTCATACTTGGGAGCCA
JMFF038E11+ CCAACTTAAGAAAGACAACATCAAGATACTTTGCAGACAGTTCTTCATACTTGGGAGCCA
JMFF004F16+ CTTGGGAGCCA
JMFF041G19+ CCAACTTAAGAAAGACAACATCAAGATACTTTGCAGACAGTTCTTCATACTTGGGAGCCA
____________________________________________________________
consensus CCAACTTAAGAAAGACAACATCAAGATACTTTGCAGACAGTTCTTCATACTTGGGAGCCA
. : . : . : . : . : . :
rJMSF043I19- TAACCTTGCAAGGACCACACCACTGAGTGTACATGTCGAGGACGACGGCTTTCTCACCAG
rJMFF050I10- TAACCTTGCAAGGACCACACCACTGAGTGTACATGTCGAGGACGACGGCTTTCTCACCAG
rJMFF005E12- TAACCTTGCAAGGACCACACCACTGAGTGTACATGTCNAGGACGACGGCTTTCTCACCAN
JMFN025K11+ TAACCTTGCAAGGACCACACCACTGAGTGTACATGTCGAGGACGACGGCTTTCTCACCAG
rJMFF022F21- TAACCTTGCAAGGACCACACCACTGAGTGTACATGTCGAGGACGACGGCTTTCTCACCAG
JMFS061C06+ TAACCTTGCAAGGACCACACCACTGAGTGTACATGTCGAGGACGACGGCTTTCTCACCAG
JMFF050I10+ TAACCTTGCAAGGACCACACCACTGAGTGTACATGTCGAGGACGACGGCTTTCTCACCAG
JMFF022F21+ TAACCTTGCAAGGACCACACCACTGAGTGTACATGTCGAGGACGACGGCTTTCTCACCAG
JMFN030O04+ TAACCTTGCAAGGACCACACCACTGAGTGTACATGTCGAGGACGACGGCTTTC
JMSF043I19+ TAACCTTGCAAGGACCACACCACTGAGTGTACATGTCGAGGACGACGGCTTTCTCACCAG
JMFF005E11+ TAACCTTGCAAGGACCACACCACTGAGTGTACATGTCGAGGACGACGGCTTTCTCACCAG
rJMFF038E11- TAACCTTGCAAGGACCACACCACTGAGTGTACATGTCGAGGACGACGGCTTTCTCACCAG
rJMSF007L05- TAACCTTGCAAGGACCACACCACTGAGTGTACATGTCGAGGACGACGGCTTTCTCACCAG
rJMFF005E11- TAACCTTGCAAGGACCACACCACTGAGTGTACATGTCGAGGACGACGGCTTTCTCACCAG
JMSF012N07+ TAACCTTGCAAGGACCACACCACTGAGTGTACATGTCGAGGACGACGGCTTTCTCACCAG
JMSF007L05+ TAACCTTGCAAGGACCACACCACTGAGTGTACATGTCGAGGACGACGGCTTTCTCACCAG
rJMSF012N07- TAACCTTGCAAGGACCACACCACTGAGTGTACATGTCGAGGACGACGGCTTTCTCACCAG
JMFN015H07+ TAACCTTGCAAGGACCACACCACTGAGTGTACATGTCGAGGACGACGGCTTTCTCACCAG
rJMFF004F16- TAACCTTGCAAGGACCACACCACTGAGTGTACATGTCGAGGACGACGGCTTTCTCACCAG
JMFF038E11+ TAACCTTGCAAGGACCACACCACTGAGTGTACATGTCGAGGACGACGGCTTTCTCACCAG
JMFF004F16+ TAACCTTGCAAGGACCACACCCNTGAGTGTACATGTCGAGGNCGACGGCTTTCTCACCAG
JMFF041G19+ TAACCTTGCAAGGACCACACCACTGAGTGTACATGTCGAGGACGACGGCTTTCTCACCAG
____________________________________________________________
consensus TAACCTTGCAAGGACCACACCACTGAGTGTACATGTCGAGGACGACGGCTTTCTCACCAG
. : . : . : . : . : . :
rJMSF043I19- CGGCTTCGACGATAGGCCAGAAGGTATCTTTGTTAACCTCGGTGACCTTACCCAACGCGG
rJMFF050I10- CGGCTTCGACGATAGGCCAGAAGGTATCTTTGTTAACCTCGGTGACCTTACCCAACGCGG
rJMFF005E12- CGGCTTCGACGATAGGCCAGAAGGTATCTTTGTTAACCTCGGTGACCTTACCCAACGCGG
JMFN025K11+ CGGCTTCGACGATAGGCCAGAAGGTATCTTTGTTAACCTCGGTGACCTTACCCAACGCGG
rJMFF022F21- CGGCTTCGACGATAGGCCAGAAGGTATCTTTGTTAACCTCGGTGACCTTACCCAACGCGG
JMFS061C06+ CGGCTTCGACGATAGGCCAGAAGGTATCTTTGTTAACCTCGGTGACCTTACCCAACGCGG
JMFF050I10+ CGGCTTCGACGATAGGCCAGAAGGTATCTTTGTTAACCTCGGTGACCTTACCCAACGCGG
JMFF022F21+ CGGCTTCGACGATAGGCCAGAAGGTATCTTTGTTAACCTCGGTGACCTTACCCAACGCGG
JMSF043I19+ CGGCTTCGACGATAGGCCAGAAGGTATCTTTGTTAACCTCGGTGACCTTACCCAACGCGG
JMFF005E11+ CGGCTTCGACGATAGGCCAGAAGGTATCTTTGTTAACCTCGGTGACCTTACCCAACGCGG
rJMFF038E11- CGGCTTCGACGATAGGCCAGAAGGTATCTTTGTTAACCTCGGTGACCTTACCCAACGCGG
rJMSF007L05- CGGCTTCGACGATAGGCCAGAAGGTATCTTTGTTAACCTCGGTGACCTTACCCAACGCGG
rJMFF005E11- CGGCTTCGACGATAGGCCAGAAGGTATCTTTGTTAACCTCGGTGACCTTACCCAACGCGG
JMSF012N07+ CGGCTTCGACGATAGGCCAGAAGGTATCTTTGTTAACCTCGGTGACCTTACCCAACGCGG
JMSF007L05+ CGGCTTCGACGATAGGCCAGAAGGTATCTTTGTTAACCTCGGTGACCTTACCCAACGCGG
rJMSF012N07- CGGCTTCGACGATAGGCCAGAAGGTATCTTTGTTAACCTCGGTGACCTTACCCAACGCGG
JMFN015H07+ CGGCTTCGACGATAGGCCAGAAGGTATCTTTGTTAACCTCGGTGACCTTACCCAACGCGG
rJMFF004F16- CGGCTTCGACGATAGGCCAGAAGGTATCTTTGTTAACCTCGGTGACCTTACCCAACGCGG
JMFF038E11+ CGGCTTCGACGATAGGCCAGAAGGTATCTTTGTTAACCTCGGTGACCTTACCCAACGCGG
JMFF004F16+ CGGCTTCGNCGATAGGCCAGAAGGTATCTTTGTTAACCTCGGTGACCTTACCCAACGCGG
JMFF041G19+ CGGCTTCGACGATAGGCCAGAAGGTATCTTTGTTAACCTCGGTGACCTTACCCAACGCGG
____________________________________________________________
consensus CGGCTTCGACGATAGGCCAGAAGGTATCTTTGTTAACCTCGGTGACCTTACCCAACGCGG
. : . : . : . : . : . :
rJMSF043I19- GAGTAGTAGTAGCCGTAGCTGTAGAGTCCAAGCTCGCCTTAACCCTCAAGCTCAGACGCC
rJMFF050I10- GAGTAGTAGTAGCCGTAGCTGTAGAGTCCAAGCTCGCCTTAACCCTCAAGCTCAGACGCC
rJMFF005E12- GAGTAGNAGTATCCGTAGCTGTAGAGTCCAAGCTCGCCTTAACCCTC
JMFN025K11+ GAGTAGTAGTAGCCGTAGCTGTAGAGTCCAAGCTCGCCTTAACCCTCAAGCTCAGACGCC
rJMFF022F21- GAGTAGTAGTAGCCGTAGCTGTAGAGTCCAAGCTCGCCTTAACCCTCAAGCTCAGACGCC
JMFS061C06+ GAGTAGTAGTAGCCGTAGCTGTAGAGTCCAAGCTCGCCTTAACCCTCAAGCTCAGACGCC
JMFF050I10+ GAGTAGTAGTAGCCGTAGCTGTAGAGTCCAAGCTCGCCTTAACCCTCAAGCTCAGACGCC
JMFF022F21+ GAGTAGTAGTAGCCGTAGCTGTAGAGTCCAAGCTCGCCTTAACCCTCAAGCTCAGACGCC
JMSF043I19+ GAGTAGTAGTAGCCGTAGCTGTAGAGTCCAAGCTCGCCTTAACCCTCAAGCTCAGACGCC
JMFF005E11+ GAGTAGTAGTAGCCGTAGCTGTAGAGTCCAAGCTCGCCTTAACCCTCAAGCTCAGACGCC
rJMFF038E11- GAGTAGTAGTAGCCGTAGCTGTAGAGTCCAAGCTCGCCTTAACCCTCAAGCTCAGACGCC
rJMSF007L05- GAGTAGTAGTAGCCGTAGCTGTAGAGTCCAAGCTCGCCTTAACCCTCAAGCTCAGACGCC
rJMFF005E11- GAGTAGTAGTAGCCGTAGCTGTAGAGTCCAAGCTCGCCTTAACCCTCAAGCTCAGACGCC
JMSF012N07+ GAGTAGTAGTAGCCGTAGCTGTAGAGTCCAAGCTCGCCTTAACCCTCAAGCTCAGACGCC
JMSF007L05+ GAGTAGTAGTAGCCGTAGCTGTAGAGTCCAAGCTCGCCTTAACCCTCAAGCTCAGACGCC
rJMSF012N07- GAGTAGTAGTAGCCGTAGCTGTAGAGTCCAAGCTCGCCTTAACCCTCAAGCTCAGACGCC
JMFN015H07+ GAGTAGTAGTAGCCGTAGCTGTAGAGTCCAAGCTCGCCTTAACCCTCAAGCTCAGACGCC
rJMFF004F16- GAGTAGTAGTAGCCGTAGCTGTAGAGTCCAAGCTCGCCTTAACCCTCAAGCTCAGACGCC
JMFF038E11+ GAGTAGTAGTAGCCGTAGCTGTAGAGTCCAAGCTCGCCTTAACCCTCAAGCTCAGACGCC
JMFF004F16+ GAGTAGTAGTAGCCGTAGCTGTAGAGTCCAAGCTCGCCTTAACCCTCAAGCTCAGACGCC
JMFF041G19+ GAGTAGTAGTAGCCGTAGCTGTAGAGTCCAAGCTCGCCTTAACCCTCAAGCTCAGACGCC
____________________________________________________________
consensus GAGTAGTAGTAGCCGTAGCTGTAGAGTCCAAGCTCGCCTTAACCCTCAAGCTCAGACGCC
. : . : . : . : . : . :
rJMSF043I19- GTCCAGCTTTCAACG-CCGCGGGGTTGTTGTATCTACGATCCACTGCGACGCTGACCACA
rJMFF050I10- GTCCAGCTTTCAACG-CCGCGGGGTTGTTGTATCTACGATCCACTGCGACGCTGACCACA
JMFN025K11+ GTCCAGCTTTCAACG-CCGCGGGGTTGTTGTATCTACGATCCACTGCGACGCTGACCACA
rJMFF022F21- GTCCAGCTTTCAACG-CCGCGGGGTTGTTGTATCTACGATCCACTGCGACGCTGACCACA
JMFS061C06+ GTCCAGCTTTCAACG-CCGCGGGGTTGTTGTATCTACGATCCACTGCGACGCTGACCACA
JMFF050I10+ GTCCAGCTTTCAACG-CCGCGGGGTTGTTGTATCTACGATCCACTGCGACGCTGACCACA
JMFF022F21+ GTCCAGCTTTCAACG-CCGCGGGGTTGTTGTATCTACGATCCACTGCGACGCTGACCACA
JMSF043I19+ GTCCAGCTTTCAACG-CCGCGGGGTTGTTGTATCTACGATCCACTGCGACGCTGACCACA
JMFF005E11+ GTCCAGCTTTCAACG-CCGCGGGGTTGTTGTATCTACGATCCACTGCGACGCTGACCACA
rJMFF038E11- GTCCAGCTTTCAACG-CCGCGGGGTTGTTGTATCTACGATCCACTGCGACGCTGACCACA
rJMSF007L05- GTCCAGCTTTCAACG-CCGCGGGGTTGTTGTATCTACGATCCACTGCGACGCTGACCACA
rJMFF005E11- GTCCAGCTTTCAACG-CCGCGGGGTTGTTGTATCTACGATCCACTGCGACGCTGACCACA
JMSF012N07+ GTCCAGCTTTCAACG-CCGCGGGGTTGTTGTATCTACGATCCACTGCGACGCTGACCACA
JMSF007L05+ GTCCAGCTTTCAACG-CCGCGGGGTTGTTGTATCTACGATCCACTGCGACGCTGACCACA
rJMSF012N07- GTCCAGCTTTCAACG-CCGCGGGGTTGTTGTATCTACGATCCACTGCGACGCTGACCACA
JMFN015H07+ GTCCAGCTTTCAACG-CCGCGGGGTTGTTGTATCTACGATCCACTGCGACGCTGACCACA
rJMFF004F16- GTCCAGCTTTCAACGCCCGCGGGGTTGTTGTATCTACGATCCACTGCGACGCTGACCACA
JMFF038E11+ GTCCAGCTTTCAACG-CCGCGGGGTTGTTGTATCTACGATCCACTGCGACGCTGACCACA
JMFF004F16+ GTCCAGCTTTCAACG-CCGCGGGGTTGTTGTATCTACGATCCACTGCGACGCTGACCACA
JMFF041G19+ GTCCAGCTTTCAACG-CCGCGGGGTTGTTGTATCTACGATCCACTGCGACGCTGACCACA
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consensus GTCCAGCTTTCAACG-CCGCGGGGTTGTTGTATCTACGATCCACTGCGACGCTGACCACA
. : . : . : . : . : . :
rJMSF043I19- AACTGCTTGGTGGACCTGCTCGAAGAACTCAACATTACCGGCTTTAACGCCGCCCTATCA
rJMFF050I10- AACTGCTTGGTGGACCTGCTCGAAGAACTCA
JMFN025K11+ AACTGCTTGGTGGACCTGCTCGAAGAACTCAACATTACCGGCTTTAACGCCGCCCTATCA
rJMFF022F21- AACTGCTTGGTGGACCTGCTCGAAGAACTCAACATTACCGGCTTTAACGCCGCCCTATCA
JMFS061C06+ AACTGCTTGGTGGACCTGCTCGAAGAACTCAACATTACCGGCTTTAACGCCGCCCTATCA
JMFF050I10+ AACTGCTTGGTGGACCTGCTCGAAGAACTCAACATTACCGGCTTTAACGCCGCCCTATCA
JMFF022F21+ AACTGCTTGGTGGACCTGCTCGAAGAACTCAACATTACCGGCTTTAACGCCGCCCTATCA
JMSF043I19+ AACTGCTTGGTGGACCTGCTCGAAGAACTCAACATTACCGGCTTTAACGCCGCCCTATCA
JMFF005E11+ AACTGCTTGGTGGACCTGCTCGAAGAACTCAACATTACCGGCTTTAACGCCGCCCTATCA
rJMFF038E11- AACTGCTTGGTGGACCTGCTCGAAGAACTCAACATTACCGGCTTTAACGCCGCCCTATCA
rJMSF007L05- AACTGCTTGGTGGACCTGCTCGAAGAACTCAACATTACCGGCTTTAACGCCGCCCTATCA
rJMFF005E11- AACTGCTTGGTGGACCTGCTCGAAGAACTCAACATTACCGGCTTTAACGCCGCCCTATCA
JMSF012N07+ AACTGCTTGGTGGACCTGCTCGAAGAACTCAACATTACCGGCTTTAACGCCGCCCTATCA
JMSF007L05+ AACTGCTTGGTGGACCTGCTCGAAGAACTCAACATTACCGGCTTTAACGCCGCCCTATCA
rJMSF012N07- AACTGCTTGGTGGACCTGCTCGAAGAACTCAACATTACCGGCTTTAACGCCGCCCTATCA
JMFN015H07+ AACTGCTTGGTGGACCTGCTCGAAGAACTCAACATTACCGGCTTTAACGCCGCCCTATCA
rJMFF004F16- AACTGCTTGGTGGACCTGCTCGAAGAACTCAACATTACCGGCTTTAACGCCGCCCTATCA
JMFF038E11+ AACTGCTTGGTGGACCTGCTCGAAGAACTCAACATTACCGGCTTTAACGCCGCCCTATCA
JMFF004F16+ AACTGCTTGGTGGACCTGCTCGAAGAACTCAACATTACCGGCTTTAACGCCGCCCTATCA
JMFF041G19+ AACTGCTTGGTGGACCTGCTCGAAGAACTCAACATTACCGGCTTTAACGCCGCCCTATCA
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consensus AACTGCTTGGTGGACCTGCTCGAAGAACTCAACATTACCGGCTTTAACGCCGCCCTATCA
. : . : . : . : . : . :
rJMSF043I19- ACTTGAACTTGTAAAGCCATTACAGATTCTTAC
JMFN025K11+ ACTTG
rJMFF022F21- ACTTGAACTTGTAAAGCCATTACAGATTCTTACAAAGACAGAAATTGTAAATAC
JMFS061C06+ ACTTGAACTTGTAAAGCCAT
JMFF050I10+ ACTTGAACTTGTAAAGCCATTACAGATTCTTACAAAGACAGAAATT
JMFF022F21+ ACTTGAACTTGTAAAGCCATTACAGATTCTTACAAAGACAGAAATTGTAAATAC
JMSF043I19+ ACTTGAACTTGTAAAGCCATTACAGATTCTTACAAAGACAGAAATTGTATATAC
JMFF005E11+ ACTTGAACTTGTAAAGCCATTACAGATTCTTACAAAGACAGAAATTGTATATACACA
rJMFF038E11- ACTTGAACTTGTAAAGCCATTACAGATTCTTACAAAGACAGAAATTGTATATACACAGA
rJMSF007L05- ACTTGAACTTGTAAAGCCATTACAGATTCTTACAAAGACAGAAATTGTATATACACC
rJMFF005E11- ACTTGAACTTGTAAAGCCATTACAGATTCTTACAAAGACAGAAATTGTATATACAC
JMSF012N07+ ACTTGAACTTGTAAAGCCATTACAGATTCTTACAAAGACAGAAATTGTATATACACC
JMSF007L05+ ACTTGAACTTGTAAAGCCATTACAGATTCTTACAAAGACAGAAATTGTATATACACC
rJMSF012N07- ACTTGAACTTGTAAAGCCATTACAGATTCTTACAAAGACAGAAATTGTATATACACC
JMFN015H07+ ACTTGAACTTGTAAAGCCATTACAG
rJMFF004F16- ACTTGAACTTGTAAAGCCATTACAGATTCTTACAAAGACAGAAATTGTATATACACAGA
JMFF038E11+ ACTTGAACTTGTAAAGCCATTACAGATTCTTACAAAGACAGAAATTGTATATACACAGA
JMFF004F16+ ACTTGAACTTGTAAAGCCATTACAGATTCTTACAAAGACAGAAATTGTATATACACAGA
JMFF041G19+ ACTTGAACTTGTAAAGCCATTACAGATTCTTACAAAGACAGAAATTGTATATACACAGAG
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consensus ACTTGAACTTGTAAAGCCATTACAGATTCTTACAAAGACAGAAATTGTATATACACAGAG