Contig 010287:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF041C10Sequence606010287 (2)ref|XP_002282025.3|9e-44PREDICTED: remodeling and spacing factor 1 [Vitis vinifera]620013791 (2)
JMSF050N02Sequence634010287 (2)ref|XP_006356632.1|231PREDICTED: uncharacterized protein LOC102586738 [Solanum tuberosum]713013791 (2)ref|XP_009775652.1|124PREDICTED: uncharacterized protein LOC104225526 [Nicotiana sylvestris]

Alignment

This contig is upended


. : . : . : . : . : . :
JMSF050N02+ TCNGAAAAGTTGATAGAGCAGTTCCATTTTTTATTGAATCANTAATGT
                      ____________________________________________________________
consensus TCNGAAAAGTTGATAGAGCAGTTCCATTTTTTATTGAATCANTAATGT
 
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JMSF050N02+ AAGACAAAACATCACCTTGATCAGCTCGAATTTCACAAAGTGCTTTAAGAAGAAGTAAGC
                      ____________________________________________________________
consensus AAGACAAAACATCACCTTGATCAGCTCGAATTTCACAAAGTGCTTTAAGAAGAAGTAAGC
 
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JMSF050N02+ GAATTATTGGATTGACTGCCTTGTATGTGCATATTTCCTCTCCTTTGGCTGGACTAAGAG
JMFF041C10+ TAAGAG
                      ____________________________________________________________
consensus GAATTATTGGATTGACTGCCTTGTATGTGCATATTTCCTCTCCTTTGGCTGGACTAAGAG
 
. : . : . : . : . : . :
JMSF050N02+ GAAAATCCCCTTCTGCTACCCATGGCCACCAAACTATGAGTTTCTTACATAGTACAGTCA
JMFF041C10+ GAAAATCCCCTTCTGCTACCCATGGCCACCAAACTATGAGTTTCTTACATAGTACAGTCA
                      ____________________________________________________________
consensus GAAAATCCCCTTCTGCTACCCATGGCCACCAAACTATGAGTTTCTTACATAGTACAGTCA
 
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JMSF050N02+ CCCAACCATCAGACTGTTTCAGTAGTTTGCTAATAGGGGGTATTCCCTTCAGAAGTGCAA
JMFF041C10+ CCCAACCATCAGACTGTTTCAGTAGTTTGCTAATAGGGGGTATTCCCTTCAGAAGTGCAA
                      ____________________________________________________________
consensus CCCAACCATCAGACTGTTTCAGTAGTTTGCTAATAGGGGGTATTCCCTTCAGAAGTGCAA
 
. : . : . : . : . : . :
JMSF050N02+ CATGAAGCTGAGCAAGTGACCTATTTGGCTCAATAAGTCCTGTCTCTATTTCTTCAGCTG
JMFF041C10+ CATGAAGCTGAGCAAGTGACCTATTTGGCTCAATAAGTCCTGTCTCTATTTCTTCAGCTG
                      ____________________________________________________________
consensus CATGAAGCTGAGCAAGTGACCTATTTGGCTCAATAAGTCCTGTCTCTATTTCTTCAGCTG
 
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JMSF050N02+ AAATTTTAAAATCGATCCCAAGAACTGGCTCAAAAACGTTGAGAAAGTTGAGAATGGAAG
JMFF041C10+ AAATTTTAAAATCGATCCCAAGAACTGGCTCAAAAACGTTGAGAAAGTTGAGAATGGAAG
                      ____________________________________________________________
consensus AAATTTTAAAATCGATCCCAAGAACTGGCTCAAAAACGTTGAGAAAGTTGAGAATGGAAG
 
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JMSF050N02+ CTAACTCCCAGCGTTGGCGGAGTTGAAGCCGAGCGAGTTCAGAATCCGTTGCAGGTGAAT
JMFF041C10+ CTAACTCCCAGCGTTGGCGGAGTTGAAGCCGAGCGAGTTCAGAATCCGTTGCAGGTGAAT
                      ____________________________________________________________
consensus CTAACTCCCAGCGTTGGCGGAGTTGAAGCCGAGCGAGTTCAGAATCCGTTGCAGGTGAAT
 
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JMSF050N02+ CCGAAATAACCTCAGGGTGGTCTTCATTTCCATTTCCGGAAGCAACAGTCGGTCGCCGGC
JMFF041C10+ CCGAAATAACCTCAGGGTGGTCTTCATTTCCATTTCCGGAAGCAACAGTCGGTCGCCGGC
                      ____________________________________________________________
consensus CCGAAATAACCTCAGGGTGGTCTTCATTTCCATTTCCGGAAGCAACAGTCGGTCGCCGGC
 
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JMSF050N02+ CTCTGTCCACCATTGTTCCAAAGAGAAAAAAGTGCGATTATAGCGAGAGAGAGAGAGAGA
JMFF041C10+ CTCTGTCCACCATTGTTCCAAAGAGAAAAAAGTGCGATTATAGCGAGAGAGAGAGAGAGA
                      ____________________________________________________________
consensus CTCTGTCCACCATTGTTCCAAAGAGAAAAAAGTGCGATTATAGCGAGAGAGAGAGAGAGA
 
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JMSF050N02+ GAGGGAGATAAATCGATTTGAGAATTGAGAGTGCAGAGAAAGAAT
JMFF041C10+ GAGGGAGATAAATCGATTTGAGAATTGAGAGTGCAGAGAAAGAATGAAGATTGGTGGGAG
                      ____________________________________________________________
consensus GAGGGAGATAAATCGATTTGAGAATTGAGAGTGCAGAGAAAGAATGAAGATTGGTGGGAG
 
. : . : . : . : . : . :
JMFF041C10+ TTCGAATTTGGGGTTACATTGCTTTGTACCCTTCCCGCCAAAACTATTTTCACTGTATTG
                      ____________________________________________________________
consensus TTCGAATTTGGGGTTACATTGCTTTGTACCCTTCCCGCCAAAACTATTTTCACTGTATTG
 
. : . : . : . : . : . :
JMFF041C10+ CTGCCTTAGTTGTGGTTAATTTCCTAGCCCCTAGGGTAACCCTACTGCTGGAATTTCAAT
                      ____________________________________________________________
consensus CTGCCTTAGTTGTGGTTAATTTCCTAGCCCCTAGGGTAACCCTACTGCTGGAATTTCAAT