Contig 010286:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMFF040P09-                                             GCTGCAGAAACAAGCAGCACTTGCA
rJMSF045I18-                                                        AAGCAGCACTTGCA
                      ____________________________________________________________
consensus                                                GCTGCAGAAACAAGCAGCACTTGCA
 
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rJMFF040P09-          CCCGAGTCCTGAGCACCGGACATGAATATGGGCGATGGGACTCACATTCCACTCATCAAC
rJMSF045I18-          CCCGAGTCCTGAGCACCGGACATGAATATGGGCGATGGGACTCACATTCCACTCATCAAC
                      ____________________________________________________________
consensus             CCCGAGTCCTGAGCACCGGACATGAATATGGGCGATGGGACTCACATTCCACTCATCAAC
 
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rJMFF040P09-          AATCTGATTAAAATTCAATCACAAACAAAAATTCAAAACAGAGTTGTGTTTTACTGTATC
rJMSF045I18-          AATCTGATTAAAATTCAATCACAAACAAAAATTCAAAACAGAGTTGTGTTTTACTGTATC
                      ____________________________________________________________
consensus             AATCTGATTAAAATTCAATCACAAACAAAAATTCAAAACAGAGTTGTGTTTTACTGTATC
 
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rJMFF040P09-          TACCTAATTACACAAGATCGTGAACACAATCCAAAATGAAAGATTCTCTTAATCATGTTT
rJMSF045I18-          TACCTAATTACACAAGATCGTGAACACAATCCAAAATGAAAGATTCTCTTAATCATGTTT
                      ____________________________________________________________
consensus             TACCTAATTACACAAGATCGTGAACACAATCCAAAATGAAAGATTCTCTTAATCATGTTT
 
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rJMFF040P09-          GGGAATGCATATAATAGAGTTGGAATCGATTGAATGTAAAGGATGCAATGGCAAACAGAG
rJMSF045I18-          GGGAATGCATATAATAGAGTTGGAATCGATTGAATGTAAAGGATGCAATGGCAAACAGAG
                      ____________________________________________________________
consensus             GGGAATGCATATAATAGAGTTGGAATCGATTGAATGTAAAGGATGCAATGGCAAACAGAG
 
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rJMFF040P09-          ATCACATCAAATAAACAATCTTCCTTGTCAATAACTATATTTCCTCTTCTTCGAAAGGAT
rJMSF045I18-          ATCACATCAAATAAACAATCTTCCTTGTCAATAACTATATTTCCTCTTCTTCGAAAGGAT
                      ____________________________________________________________
consensus             ATCACATCAAATAAACAATCTTCCTTGTCAATAACTATATTTCCTCTTCTTCGAAAGGAT
 
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rJMFF040P09-          CACGTTCTGGATAATCCCCCACCTTTACTTTATCTGGTCGGACCATCCCACCATGAAGGG
rJMSF045I18-          CACGTTCTGGATAATCCCCCACCTTTACTTTATCTGGTCGGACCATCCCACCATGAAGGG
                      ____________________________________________________________
consensus             CACGTTCTGGATAATCCCCCACCTTTACTTTATCTGGTCGGACCATCCCACCATGAAGGG
 
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rJMFF040P09-          GAGGACAGCTGAAGTACCGTTTTCCCTTCACCATGCCGTCGTGTTTTCCAACTGGTTCGT
rJMSF045I18-          GAGGACAGCTGAAGTACCGTTTTCCCTTCACCATGCCGTCGTGTTTTCCAACTGGTTCGT
                      ____________________________________________________________
consensus             GAGGACAGCTGAAGTACCGTTTTCCCTTCACCATGCCGTCGTGTTTTCCAACTGGTTCGT
 
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rJMFF040P09-          CATACTGAACTCCAACCCAAAAACCAGCAGCCAGTGTTTCTGCTTGACCCACAAATTTCA
rJMSF045I18-          CATACTGAACTCCAACCCAAAAACCAGCAGCAAGTGTTTCTGCTTGACCCACAAATTTCA
                      ____________________________________________________________
consensus             CATACTGAACTCCAACCCAAAAACCAGCAGCCAGTGTTTCTGCTTGACCCACAAATTTCA
 
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rJMFF040P09-          CAACGCCTCGTCTTTCCCCAAGTTCAACTTGGCATCTATCTCCTACCTTGATATGTGCAC
rJMSF045I18-          CAACGCCTCGTCTTTCCCCAAGTTCAACTTGGCATCTATCTCCTACCTTGATATGTGCAC
JMSF045I18+                                                           TGATATGTGCAC
                      ____________________________________________________________
consensus             CAACGCCTCGTCTTTCCCCAAGTTCAACTTGGCATCTATCTCCTACCTTGATATGTGCAC
 
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rJMFF040P09-          AGAGATCCT-CCATGTAGTTGTCGCAAATTTTAGCTTCATTATCAGTAGCATTTTTGCAT
rJMSF045I18-          AGAGATCCT-CCATGTAGTTGTCGCAAATTTTAGCTTCATTATCAGTAGCATTTTTGCAT
JMSF045I18+           AGAGATCCTNCCATGTAGTTGTCGCAAATTTTAGCTTCATTATCAGTAGCATTTTTGCAT
                      ____________________________________________________________
consensus             AGAGATCCT-CCATGTAGTTGTCGCAAATTTTAGCTTCATTATCAGTAGCATTTTTGCAT
 
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rJMFF040P09-          GCCAATTTTTCCTTGAACTTTCTGAAGGTACCATCCCGTTTATCATAAGCGTCCTCAGAG
rJMSF045I18-          GCCAATTTTTCCTTGAACTTTCTGAAGGTACCATCCCGTTTATCATAAGCGTCCTCAGAG
JMSF045I18+           GCCAATTTTTCCTTGAACTTTCTGAAGGTACCATCCCGTTTATCATAAGCGTCCTCAGAG
                      ____________________________________________________________
consensus             GCCAATTTTTCCTTGAACTTTCTGAAGGTACCATCCCGTTTATCATAAGCGTCCTCAGAG
 
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rJMFF040P09-          ATTGTGTACTT                                                 
rJMSF045I18-          ATTGTGTACTTTTCCACAAGAGAGGTGTCCTCCAGCCAACCACCAGATGTTACTGATGAT
JMSF045I18+           ATTGTGTACTTTTCCACAAGAGAGGTGTCCTCCAGCCAACCACCAGATGTTACTGATGAT
                      ____________________________________________________________
consensus             ATTGTGTACTTTTCCACAAGAGAGGTGTCCTCCAGCCAACCACCAGATGTTACTGATGAT
 
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rJMSF045I18-          GGATCAGTGTCAATAACATGCAGCCGATATCCATCATGTGGA                  
JMSF045I18+           GGATCAGTGTCAATAACATGCAGCCGATATCCATCATGTGGAGAATAAAAGCCAAATGGT
                      ____________________________________________________________
consensus             GGATCAGTGTCAATAACATGCAGCCGATATCCATCATGTGGAGAATAAAAGCCAAATGGT
 
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JMSF045I18+           CTCGTATTATCACTTAAGTCTGAAATTTTAGCACCAGTATCATCATAAAGCTCAAGGCAC
JMFF040P09+                                          CACCAGTATCATCATAAAGCTCAAGGCAC
                      ____________________________________________________________
consensus             CTCGTATTATCACTTAAGTCTGAAATTTTAGCACCAGTATCATCATAAAGCTCAAGGCAC
 
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JMSF045I18+           ATTGAACTAACAGAAGTACCACACTTTTTCCACAGCTTTTCTTTTACAGCTTCTACTGTC
JMFF040P09+           ATTGAACTAACAGAAGTACCACACTTTTTCCACAGCTTTTCTTTTACAGCTTCTACTGTC
                      ____________________________________________________________
consensus             ATTGAACTAACAGAAGTACCACACTTTTTCCACAGCTTTTCTTTTACAGCTTCTACTGTC
 
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JMSF045I18+           ATCTGGAGAGAGAAACGAATATCAGCGGAGAAGCTCTTGATATTGGCATGGGTGACCCTT
JMFF040P09+           ATCTGGAGAGAGAAACGAATATCAGCGGAGAAGCTCTTGATATTGGCATGGGTGACCCTT
                      ____________________________________________________________
consensus             ATCTGGAGAGAGAAACGAATATCAGCGGAGAAGCTCTTGATATTGGCATGGGTGACCCTT
 
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JMSF045I18+           ATGAGAACGGAATCATCTGCTGGTATATTTTGTAATACAGAAGCCATATATTTTGCAACC
JMFF040P09+           ATGAGAACGGAATCATCTGCTGGTATATTTTGTAATACAGAAGCCATATATTTTGCAACC
                      ____________________________________________________________
consensus             ATGAGAACGGAATCATCTGCTGGTATATTTTGTAATACAGAAGCCATATATTTTGCAACC
 
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JMSF045I18+           CAAATGCTCAGCTAAGTGTTTTGACAAACCAGTACACAGCAAATCTCCTCCCAACAAGCA
JMFF040P09+           CAAATGCTCAGCTAAGTGTTTTGACAAACCAGTACACAGCAAATCTCCTCCCAACAAGCA
                      ____________________________________________________________
consensus             CAAATGCTCAGCTAAGTGTTTTGACAAACCAGTACACAGCAAATCTCCTCCCAACAAGCA
 
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JMSF045I18+           GCTAGTATAGCCTAGAGAAATAAAATCAGTGACTTTGTGAGGCCTATGGGATCCGACTGC
JMFF040P09+           GCTAGTATAGCCTAGAGAAATAAAATCAGTGACTTTGTGAGGCCTATGGGATCCGACTGC
                      ____________________________________________________________
consensus             GCTAGTATAGCCTAGAGAAATAAAATCAGTGACTTTGTGAGGCCTATGGGATCCGACTGC
 
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JMSF045I18+           CGACAGGGATTGCGAATTTGCGAGACTGCCAGAGCAAAGGACTGCCGCCGGTGTGATGCG
JMFF040P09+           CGACAGGGATTGCGAATTTGCGAGACTGCCAGAGCAAAGGACTGCCGCCGGTGTGATGCG
                      ____________________________________________________________
consensus             CGACAGGGATTGCGAATTTGCGAGACTGCCAGAGCAAAGGACTGCCGCCGGTGTGATGCG
 
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JMSF045I18+           AGATGGCGAGAGCAGAAGGACTACCACCGGGCGCCGGTCAGCCGGTGTGGACTGTGGAGT
JMFF040P09+           AGATGGCGAGAGCAGAAGGACTACCACCGGGCGCCGGTCAGCCGGTGTGGACTGTGGAGT
                      ____________________________________________________________
consensus             AGATGGCGAGAGCAGAAGGACTACCACCGGGCGCCGGTCAGCCGGTGTGGACTGTGGAGT
 
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JMSF045I18+           GTTGGCCTGTGTTTGCGGAGTTCGGAACTTGGCGGAATGGCGGTGCGCCGG         
JMFF040P09+           GTTGGCCTGTGTTTGCGGAGTTCGGAACTTGGCGGAATGGCGGTGCGCCGGCGCGACGAT
                      ____________________________________________________________
consensus             GTTGGCCTGTGTTTGCGGAGTTCGGAACTTGGCGGAATGGCGGTGCGCCGGCGCGACGAT
 
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JMFF040P09+           GTCACTCTGTGAAATTCTAAAATCTGCAGCTTCTAAGGTGAATTGGGAACTGGAAAAAGT
                      ____________________________________________________________
consensus             GTCACTCTGTGAAATTCTAAAATCTGCAGCTTCTAAGGTGAATTGGGAACTGGAAAAAGT