Contig 010286:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF040P09Sequence569010286 (4)emb|CDO97221.1|3e-28unnamed protein product [Coffea canephora]695010286 (4)ref|XP_011027275.1|1e-68PREDICTED: tubulin-folding cofactor B [Populus euphratica]
JMSF045I18Sequence787010286 (4)emb|CDO97221.1|2e-82unnamed protein product [Coffea canephora]775010286 (4)ref|XP_008222914.1|8e-91PREDICTED: tubulin-folding cofactor B-like [Prunus mume]

Alignment

This contig is upended


. : . : . : . : . : . :
rJMFF040P09- GCTGCAGAAACAAGCAGCACTTGCA
rJMSF045I18- AAGCAGCACTTGCA
                      ____________________________________________________________
consensus GCTGCAGAAACAAGCAGCACTTGCA
 
. : . : . : . : . : . :
rJMFF040P09- CCCGAGTCCTGAGCACCGGACATGAATATGGGCGATGGGACTCACATTCCACTCATCAAC
rJMSF045I18- CCCGAGTCCTGAGCACCGGACATGAATATGGGCGATGGGACTCACATTCCACTCATCAAC
                      ____________________________________________________________
consensus CCCGAGTCCTGAGCACCGGACATGAATATGGGCGATGGGACTCACATTCCACTCATCAAC
 
. : . : . : . : . : . :
rJMFF040P09- AATCTGATTAAAATTCAATCACAAACAAAAATTCAAAACAGAGTTGTGTTTTACTGTATC
rJMSF045I18- AATCTGATTAAAATTCAATCACAAACAAAAATTCAAAACAGAGTTGTGTTTTACTGTATC
                      ____________________________________________________________
consensus AATCTGATTAAAATTCAATCACAAACAAAAATTCAAAACAGAGTTGTGTTTTACTGTATC
 
. : . : . : . : . : . :
rJMFF040P09- TACCTAATTACACAAGATCGTGAACACAATCCAAAATGAAAGATTCTCTTAATCATGTTT
rJMSF045I18- TACCTAATTACACAAGATCGTGAACACAATCCAAAATGAAAGATTCTCTTAATCATGTTT
                      ____________________________________________________________
consensus TACCTAATTACACAAGATCGTGAACACAATCCAAAATGAAAGATTCTCTTAATCATGTTT
 
. : . : . : . : . : . :
rJMFF040P09- GGGAATGCATATAATAGAGTTGGAATCGATTGAATGTAAAGGATGCAATGGCAAACAGAG
rJMSF045I18- GGGAATGCATATAATAGAGTTGGAATCGATTGAATGTAAAGGATGCAATGGCAAACAGAG
                      ____________________________________________________________
consensus GGGAATGCATATAATAGAGTTGGAATCGATTGAATGTAAAGGATGCAATGGCAAACAGAG
 
. : . : . : . : . : . :
rJMFF040P09- ATCACATCAAATAAACAATCTTCCTTGTCAATAACTATATTTCCTCTTCTTCGAAAGGAT
rJMSF045I18- ATCACATCAAATAAACAATCTTCCTTGTCAATAACTATATTTCCTCTTCTTCGAAAGGAT
                      ____________________________________________________________
consensus ATCACATCAAATAAACAATCTTCCTTGTCAATAACTATATTTCCTCTTCTTCGAAAGGAT
 
. : . : . : . : . : . :
rJMFF040P09- CACGTTCTGGATAATCCCCCACCTTTACTTTATCTGGTCGGACCATCCCACCATGAAGGG
rJMSF045I18- CACGTTCTGGATAATCCCCCACCTTTACTTTATCTGGTCGGACCATCCCACCATGAAGGG
                      ____________________________________________________________
consensus CACGTTCTGGATAATCCCCCACCTTTACTTTATCTGGTCGGACCATCCCACCATGAAGGG
 
. : . : . : . : . : . :
rJMFF040P09- GAGGACAGCTGAAGTACCGTTTTCCCTTCACCATGCCGTCGTGTTTTCCAACTGGTTCGT
rJMSF045I18- GAGGACAGCTGAAGTACCGTTTTCCCTTCACCATGCCGTCGTGTTTTCCAACTGGTTCGT
                      ____________________________________________________________
consensus GAGGACAGCTGAAGTACCGTTTTCCCTTCACCATGCCGTCGTGTTTTCCAACTGGTTCGT
 
. : . : . : . : . : . :
rJMFF040P09- CATACTGAACTCCAACCCAAAAACCAGCAGCCAGTGTTTCTGCTTGACCCACAAATTTCA
rJMSF045I18- CATACTGAACTCCAACCCAAAAACCAGCAGCAAGTGTTTCTGCTTGACCCACAAATTTCA
                      ____________________________________________________________
consensus CATACTGAACTCCAACCCAAAAACCAGCAGCCAGTGTTTCTGCTTGACCCACAAATTTCA
 
. : . : . : . : . : . :
rJMFF040P09- CAACGCCTCGTCTTTCCCCAAGTTCAACTTGGCATCTATCTCCTACCTTGATATGTGCAC
rJMSF045I18- CAACGCCTCGTCTTTCCCCAAGTTCAACTTGGCATCTATCTCCTACCTTGATATGTGCAC
JMSF045I18+ TGATATGTGCAC
                      ____________________________________________________________
consensus CAACGCCTCGTCTTTCCCCAAGTTCAACTTGGCATCTATCTCCTACCTTGATATGTGCAC
 
. : . : . : . : . : . :
rJMFF040P09- AGAGATCCT-CCATGTAGTTGTCGCAAATTTTAGCTTCATTATCAGTAGCATTTTTGCAT
rJMSF045I18- AGAGATCCT-CCATGTAGTTGTCGCAAATTTTAGCTTCATTATCAGTAGCATTTTTGCAT
JMSF045I18+ AGAGATCCTNCCATGTAGTTGTCGCAAATTTTAGCTTCATTATCAGTAGCATTTTTGCAT
                      ____________________________________________________________
consensus AGAGATCCT-CCATGTAGTTGTCGCAAATTTTAGCTTCATTATCAGTAGCATTTTTGCAT
 
. : . : . : . : . : . :
rJMFF040P09- GCCAATTTTTCCTTGAACTTTCTGAAGGTACCATCCCGTTTATCATAAGCGTCCTCAGAG
rJMSF045I18- GCCAATTTTTCCTTGAACTTTCTGAAGGTACCATCCCGTTTATCATAAGCGTCCTCAGAG
JMSF045I18+ GCCAATTTTTCCTTGAACTTTCTGAAGGTACCATCCCGTTTATCATAAGCGTCCTCAGAG
                      ____________________________________________________________
consensus GCCAATTTTTCCTTGAACTTTCTGAAGGTACCATCCCGTTTATCATAAGCGTCCTCAGAG
 
. : . : . : . : . : . :
rJMFF040P09- ATTGTGTACTT
rJMSF045I18- ATTGTGTACTTTTCCACAAGAGAGGTGTCCTCCAGCCAACCACCAGATGTTACTGATGAT
JMSF045I18+ ATTGTGTACTTTTCCACAAGAGAGGTGTCCTCCAGCCAACCACCAGATGTTACTGATGAT
                      ____________________________________________________________
consensus ATTGTGTACTTTTCCACAAGAGAGGTGTCCTCCAGCCAACCACCAGATGTTACTGATGAT
 
. : . : . : . : . : . :
rJMSF045I18- GGATCAGTGTCAATAACATGCAGCCGATATCCATCATGTGGA
JMSF045I18+ GGATCAGTGTCAATAACATGCAGCCGATATCCATCATGTGGAGAATAAAAGCCAAATGGT
                      ____________________________________________________________
consensus GGATCAGTGTCAATAACATGCAGCCGATATCCATCATGTGGAGAATAAAAGCCAAATGGT
 
. : . : . : . : . : . :
JMSF045I18+ CTCGTATTATCACTTAAGTCTGAAATTTTAGCACCAGTATCATCATAAAGCTCAAGGCAC
JMFF040P09+ CACCAGTATCATCATAAAGCTCAAGGCAC
                      ____________________________________________________________
consensus CTCGTATTATCACTTAAGTCTGAAATTTTAGCACCAGTATCATCATAAAGCTCAAGGCAC
 
. : . : . : . : . : . :
JMSF045I18+ ATTGAACTAACAGAAGTACCACACTTTTTCCACAGCTTTTCTTTTACAGCTTCTACTGTC
JMFF040P09+ ATTGAACTAACAGAAGTACCACACTTTTTCCACAGCTTTTCTTTTACAGCTTCTACTGTC
                      ____________________________________________________________
consensus ATTGAACTAACAGAAGTACCACACTTTTTCCACAGCTTTTCTTTTACAGCTTCTACTGTC
 
. : . : . : . : . : . :
JMSF045I18+ ATCTGGAGAGAGAAACGAATATCAGCGGAGAAGCTCTTGATATTGGCATGGGTGACCCTT
JMFF040P09+ ATCTGGAGAGAGAAACGAATATCAGCGGAGAAGCTCTTGATATTGGCATGGGTGACCCTT
                      ____________________________________________________________
consensus ATCTGGAGAGAGAAACGAATATCAGCGGAGAAGCTCTTGATATTGGCATGGGTGACCCTT
 
. : . : . : . : . : . :
JMSF045I18+ ATGAGAACGGAATCATCTGCTGGTATATTTTGTAATACAGAAGCCATATATTTTGCAACC
JMFF040P09+ ATGAGAACGGAATCATCTGCTGGTATATTTTGTAATACAGAAGCCATATATTTTGCAACC
                      ____________________________________________________________
consensus ATGAGAACGGAATCATCTGCTGGTATATTTTGTAATACAGAAGCCATATATTTTGCAACC
 
. : . : . : . : . : . :
JMSF045I18+ CAAATGCTCAGCTAAGTGTTTTGACAAACCAGTACACAGCAAATCTCCTCCCAACAAGCA
JMFF040P09+ CAAATGCTCAGCTAAGTGTTTTGACAAACCAGTACACAGCAAATCTCCTCCCAACAAGCA
                      ____________________________________________________________
consensus CAAATGCTCAGCTAAGTGTTTTGACAAACCAGTACACAGCAAATCTCCTCCCAACAAGCA
 
. : . : . : . : . : . :
JMSF045I18+ GCTAGTATAGCCTAGAGAAATAAAATCAGTGACTTTGTGAGGCCTATGGGATCCGACTGC
JMFF040P09+ GCTAGTATAGCCTAGAGAAATAAAATCAGTGACTTTGTGAGGCCTATGGGATCCGACTGC
                      ____________________________________________________________
consensus GCTAGTATAGCCTAGAGAAATAAAATCAGTGACTTTGTGAGGCCTATGGGATCCGACTGC
 
. : . : . : . : . : . :
JMSF045I18+ CGACAGGGATTGCGAATTTGCGAGACTGCCAGAGCAAAGGACTGCCGCCGGTGTGATGCG
JMFF040P09+ CGACAGGGATTGCGAATTTGCGAGACTGCCAGAGCAAAGGACTGCCGCCGGTGTGATGCG
                      ____________________________________________________________
consensus CGACAGGGATTGCGAATTTGCGAGACTGCCAGAGCAAAGGACTGCCGCCGGTGTGATGCG
 
. : . : . : . : . : . :
JMSF045I18+ AGATGGCGAGAGCAGAAGGACTACCACCGGGCGCCGGTCAGCCGGTGTGGACTGTGGAGT
JMFF040P09+ AGATGGCGAGAGCAGAAGGACTACCACCGGGCGCCGGTCAGCCGGTGTGGACTGTGGAGT
                      ____________________________________________________________
consensus AGATGGCGAGAGCAGAAGGACTACCACCGGGCGCCGGTCAGCCGGTGTGGACTGTGGAGT
 
. : . : . : . : . : . :
JMSF045I18+ GTTGGCCTGTGTTTGCGGAGTTCGGAACTTGGCGGAATGGCGGTGCGCCGG
JMFF040P09+ GTTGGCCTGTGTTTGCGGAGTTCGGAACTTGGCGGAATGGCGGTGCGCCGGCGCGACGAT
                      ____________________________________________________________
consensus GTTGGCCTGTGTTTGCGGAGTTCGGAACTTGGCGGAATGGCGGTGCGCCGGCGCGACGAT
 
. : . : . : . : . : . :
JMFF040P09+ GTCACTCTGTGAAATTCTAAAATCTGCAGCTTCTAAGGTGAATTGGGAACTGGAAAAAGT
                      ____________________________________________________________
consensus GTCACTCTGTGAAATTCTAAAATCTGCAGCTTCTAAGGTGAATTGGGAACTGGAAAAAGT