Contig 010279:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF038F12Sequence560010279 (2)ref|XP_009766633.1|5e-80PREDICTED: tankyrase [Nicotiana sylvestris]752010279 (2)ref|XP_004244426.1|9e-57PREDICTED: ankyrin repeat domain-containing protein 29 [Solanum lycopersicum]

Alignment

This contig is upended


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rJMFF038F12-                                                                TGGTAT
                      ____________________________________________________________
consensus                                                                   TGGTAT
 
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rJMFF038F12-          AATTTGAAATACCAGCACTGGTTGCCATGTCAACATCTCTATAATAACAAAACAACATAG
                      ____________________________________________________________
consensus             AATTTGAAATACCAGCACTGGTTGCCATGTCAACATCTCTATAATAACAAAACAACATAG
 
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rJMFF038F12-          CTCCCGCTATCATACTAGTGAAATGTGTGTTAAGTGATACAGCTTGTAGCTATTGTAAGT
                      ____________________________________________________________
consensus             CTCCCGCTATCATACTAGTGAAATGTGTGTTAAGTGATACAGCTTGTAGCTATTGTAAGT
 
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rJMFF038F12-          CATATTTCCACAGAGTTCACTCAAAGGTTCTCTTCCTCTTCCTCTTCCTGCACGTCATCT
                      ____________________________________________________________
consensus             CATATTTCCACAGAGTTCACTCAAAGGTTCTCTTCCTCTTCCTCTTCCTGCACGTCATCT
 
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rJMFF038F12-          GAAGCTAGAAGATGATTTAGAGCAACTTTTGCTTTCTTTGTTTCCTTGGAGTTTTCCTGA
                      ____________________________________________________________
consensus             GAAGCTAGAAGATGATTTAGAGCAACTTTTGCTTTCTTTGTTTCCTTGGAGTTTTCCTGA
 
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rJMFF038F12-          TCTTCCTCACCGTCTGCTTTTCTCTTGACAGATTCATCTTTCGCATCCTCAGCCTCTCCA
                      ____________________________________________________________
consensus             TCTTCCTCACCGTCTGCTTTTCTCTTGACAGATTCATCTTTCGCATCCTCAGCCTCTCCA
 
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rJMFF038F12-          CCCCCGTCCTCATCAGCTTTGACCTCAGAGCCTTCTGCATTTTCCACCGATGAGGGGTTT
                      ____________________________________________________________
consensus             CCCCCGTCCTCATCAGCTTTGACCTCAGAGCCTTCTGCATTTTCCACCGATGAGGGGTTT
 
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rJMFF038F12-          GGTTTAGCTTCATCACTTTTTTCTCCACCACCAAGAGCCTCTTGGATAGATGTGGTTTCG
JMFF038F12+                                                      GGATAGATGTGGTTTCG
                      ____________________________________________________________
consensus             GGTTTAGCTTCATCACTTTTTTCTCCACCACCAAGAGCCTCTTGGATAGATGTGGTTTCG
 
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rJMFF038F12-          CATTCGTGTAAGAATGACCGGATGTCGTCATTGCTTGCGAGATCAATGGGAGTCTTGGCT
JMFF038F12+           CATTCGTGTAAGAATGACCGGATGTCGTCATTGCTTGCGAGATCAATGGGAGTCTTGGCT
                      ____________________________________________________________
consensus             CATTCGTGTAAGAATGACCGGATGTCGTCATTGCTTGCGAGATCAATGGGAGTCTTGGCT
 
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rJMFF038F12-          GCTTTGTTTCTAACACTAAGATTTGCACCTTTCTTCAACAAATATTTGACAAGTTCCAGA
JMFF038F12+           GCTTTGTTTCTAACACTAAGATTTGCACCTTTCTTCAACAAATATTTGACAAGTTCCAGA
                      ____________________________________________________________
consensus             GCTTTGTTTCTAACACTAAGATTTGCACCTTTCTTCAACAAATATTTGACAAGTTCCAGA
 
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rJMFF038F12-          TTAGATCCTTGGGCAGCGTAGTGAAGGGCAGTCATACCCTTGCGATTGGCCGATTTTACA
JMFF038F12+           TTAGATCCTTGGGCAGCGTAGTGAAGGGCAGTCATACCCTTGCGATTGGCCGATTTTACA
                      ____________________________________________________________
consensus             TTAGATCCTTGGGCAGCGTAGTGAAGGGCAGTCATACCCTTGCGATTGGCCGATTTTACA
 
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rJMFF038F12-          GATACTCCCGATGTAAGAAGAATCCGTACAACCTCTAGATGGCCTTTCTGAGCAGCAAAG
JMFF038F12+           GATACTCCCGATGTAAGAAGAATCCGTACAACCTCTAGATGGCCTTTCTGAGCAGCAAAG
                      ____________________________________________________________
consensus             GATACTCCCGATGTAAGAAGAATCCGTACAACCTCTAGATGGCCTTTCTGAGCAGCAAAG
 
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rJMFF038F12-          TGAACTGCACCCATGTCGTCCATGGCAGCAGCACCCACATCGGNCTTGNTCTTGCAGAGA
JMFF038F12+           TGAACTGCACCCATGTCGTCCATGGCAGCAGCACCCACATCGGCCTTGTTCTTGCAGAGA
                      ____________________________________________________________
consensus             TGAACTGCACCCATGTCGTCCATGGCAGCAGCACCCACATCGGCCTTGTTCTTGCAGAGA
 
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rJMFF038F12-          TAATTCACTACCTGTGCATGTCCAGA                                  
JMFF038F12+           TAATTCACTACCTGTGCATGTCCAGACCACGCTGCCAGGTGGAGTGGGGTTCGAGAGTGC
                      ____________________________________________________________
consensus             TAATTCACTACCTGTGCATGTCCAGACCACGCTGCCAGGTGGAGTGGGGTTCGAGAGTGC
 
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JMFF038F12+           TTGTCTCTGGAGTTGACTGCGAGTGGGTTGGAGCTGCATATTCTCTGCACGGCGGTCAGG
                      ____________________________________________________________
consensus             TTGTCTCTGGAGTTGACTGCGAGTGGGTTGGAGCTGCATATTCTCTGCACGGCGGTCAGG
 
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JMFF038F12+           TCACCCGCTCGAGCCGCCGCGTGTAGTTCCTCGTTCGATTGTTTCTTTGGGTTTCCCATT
                      ____________________________________________________________
consensus             TCACCCGCTCGAGCCGCCGCGTGTAGTTCCTCGTTCGATTGTTTCTTTGGGTTTCCCATT
 
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JMFF038F12+           TTCCTTTCCCTGATTCTTGTGAGCTTCAACAAAACCAGATTTTCTAGTTTCTGTATCAGT
                      ____________________________________________________________
consensus             TTCCTTTCCCTGATTCTTGTGAGCTTCAACAAAACCAGATTTTCTAGTTTCTGTATCAGT