Contig 010277:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF038B11Sequence575010277 (4)ref|XP_009626549.1|2e-97PREDICTED: ubiquitin-conjugating enzyme E2 variant 1B-like [Nicotiana tomentosi721010277 (4)ref|XP_009626549.1|2e-96PREDICTED: ubiquitin-conjugating enzyme E2 variant 1B-like [Nicotiana tomentosi
JMSF046B06Sequence711010277 (4)ref|XP_009626549.1|2e-96PREDICTED: ubiquitin-conjugating enzyme E2 variant 1B-like [Nicotiana tomentosi663010277 (4)ref|XP_009626549.1|7e-97PREDICTED: ubiquitin-conjugating enzyme E2 variant 1B-like [Nicotiana tomentosi

Alignment

This contig is upended


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rJMFF038B11-                     GCTTATTCATAGAATTTGAAATTTGATATTGAATCTCTCAAGCCATTGT
JMSF046B06+                                                      ATCTCTCAAGCCATTGT
                      ____________________________________________________________
consensus                        GCTTATTCATAGAATTTGAAATTTGATATTGAATCTCTCAAGCCATTGT
 
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rJMFF038B11-          GTATGATAAAGGTGAATTGGAATATCACATCAGTATCCACAGGTACAAGTACACATGCAG
JMSF046B06+           GTATGATAAAGGTGAATTGGAATATCACATCAGTATCCACAGGTACAAGTACACATGCAG
rJMSF046B06-                                                     TACAAGTACACATGCAG
                      ____________________________________________________________
consensus             GTATGATAAAGGTGAATTGGAATATCACATCAGTATCCACAGGTACAAGTACACATGCAG
 
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rJMFF038B11-          CATATGCTTAC--ATATATATAGTTATATAATATATATTAAGGGTTCCAAGAGATTATTT
JMSF046B06+           CATATGCTTACATATATATATAGTTATATAATATATATTAAGGGTTCCAAGAGATTATTT
rJMSF046B06-          CATATGCTTACATATATATATAGTTATATAATATATATTAAGGGTTCCAAGAGATTATTT
                      ____________________________________________________________
consensus             CATATGCTTACATATATATATAGTTATATAATATATATTAAGGGTTCCAAGAGATTATTT
 
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rJMFF038B11-          GTTAAAGGCTATGTACATCTCGATGTTCGATGGTATACTCACAATTAGAGGATGCAACAC
JMSF046B06+           GTTAAAGGCTATGTACATCTCGATGTTCGATGGTATACTCACAATTAGAGGATGCAACAC
rJMSF046B06-          GTTAAAGGCTATGTACATCTCGATGTTCGATGGTATACTCACAATTAGAGGATGCAACAC
JMFF038B11+                                    TTCGATGGTATACTCACAATTAGAGGATGCAACAC
                      ____________________________________________________________
consensus             GTTAAAGGCTATGTACATCTCGATGTTCGATGGTATACTCACAATTAGAGGATGCAACAC
 
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rJMFF038B11-          CTTAGCACAATCCCTTTTTGATCCACCCGCCCATCTTCGTTGCCTGCTTCAGGAGGTTGA
JMSF046B06+           CTTAGCACAATCCCTTTTTGATCCACCCGCCCATCTTCGTTGCCTGCTTCAGGAGGTTGA
rJMSF046B06-          CTTAGCACAATCCCTTTTTGATCCACCCGCCCATCTTCGTTGCCTGCTTCAGGAGGTTGA
JMFF038B11+           CTTAGCACAATCCCTTTTTGATCCACCCGCCCATCTTCGTTGCCTGCTTCAGGAGGTTGA
                      ____________________________________________________________
consensus             CTTAGCACAATCCCTTTTTGATCCACCCGCCCATCTTCGTTGCCTGCTTCAGGAGGTTGA
 
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rJMFF038B11-          ACTAGCTTTCGATTTTGGGGAGACATCATATCCTTTTTCAACTGCAATAATACATCCTCC
JMSF046B06+           ACTAGCTTTCGATTTTGGGGAGACATCATATCCTTTTTCAACTGCAATAATACATCCTCC
rJMSF046B06-          ACTAGCTTTCGATTTTGGGGAGACATCATATCCTTTTTCAACTGCAATAATACATCCTCC
JMFF038B11+           ACTAGCTTTCGATTTTGGGGAGACATCATATCCTTTTTCAACTGCAATAATACATCCTCC
                      ____________________________________________________________
consensus             ACTAGCTTTCGATTTTGGGGAGACATCATATCCTTTTTCAACTGCAATAATACATCCTCC
 
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rJMFF038B11-          ATTGTGTGCTCCCTTTTCCAATCAGCAAGCATGGGGAAAAGAATCGGTTCAACCACACCA
JMSF046B06+           ATTGTGTGCTCCCTTTTCCAATCAGCAAGCATGGGGAAAAGAATCGGTTCAACCACACCA
rJMSF046B06-          ATTGTGTGCTCCCTTTTCCAATCAGCAAGCATGGGGAAAAGAATCGGTTCAACCACACCA
JMFF038B11+           ATTGTGTGCTCCCTTTTCCAATCAGCAAGCATGGGGAAAAGAATCGGTTCAACCACACCA
                      ____________________________________________________________
consensus             ATTGTGTGCTCCCTTTTCCAATCAGCAAGCATGGGGAAAAGAATCGGTTCAACCACACCA
 
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rJMFF038B11-          GTTTCTTGATTAACACAGCTCATGTTTATCCTGGTTTGAAACCTTACACTGGGTGGTTTA
JMSF046B06+           GTTTCTTGATTAACACAGCTCATGTTTATCCTGGTTTGAAACCTTACACTGGGTGGTTTA
rJMSF046B06-          GTTTCTTGATTAACACAGCTCATGTTTATCCTGGTTTGAAACCTTACACTGGGTGGTTTA
JMFF038B11+           GTTTCTTGATTAACACAGCTCATGTTTATCCTGGTTTGAAACCTTACACTGGGTGGTTTA
                      ____________________________________________________________
consensus             GTTTCTTGATTAACACAGCTCATGTTTATCCTGGTTTGAAACCTTACACTGGGTGGTTTA
 
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rJMFF038B11-          TCAGGATAGTCCTGTCCGCAGAACAGCTTCAACTGGTAGATTCGCCCTTCATGTACAGTA
JMSF046B06+           TCAGGATAATCCTGTCCGCAGAACAGCTTCAACTGGTAGATTCGCCCTTCATGTACAGTA
rJMSF046B06-          TCAGGATAATCCTGTCCGCAGAACAGCTTCAACTGGTAGATTCGCCCTTCATGTACAGTA
JMFF038B11+           TCAGGATAGTCCTGTCCGCAGAACAGCTTCAACTGGTAGATTCGCCCTTCATGTACAGTA
                      ____________________________________________________________
consensus             TCAGGATAGTCCTGTCCGCAGAACAGCTTCAACTGGTAGATTCGCCCTTCATGTACAGTA
 
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rJMFF038B11-          TTTGGAGGACCAATTATTGTTCCAGTCCAAGACTGCATGTAAACATCATCAGCATCATCC
JMSF046B06+           TTTGGAGGACCAATTATTGTTCCAGTCCAAGACTGCATGTAAACATCATCAGCATCATCC
rJMSF046B06-          TTTGGAGGACCAATTATTGTTCCAGTCCAAGACTGCATGTAAACATCATCAGCATCATCC
JMFF038B11+           TTTGGAGGACCAATTATTGTTCCAGTCCAAGACTGCATGTAAACATCATCAGCATCATCC
                      ____________________________________________________________
consensus             TTTGGAGGACCAATTATTGTTCCAGTCCAAGACTGCATGTAAACATCATCAGCATCATCC
 
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rJMFF038B11-          ATTCCATAGCTGACAGTTCCATCTCCTATTCCCTTTTCTCCCCTCTCAAGTTCTTCTAGT
JMSF046B06+           ATTCCATAGCTGACAGTTCCATCTCCTATTCCCTTTTCTCCCCTCTCAAGTTCTTCTAGT
rJMSF046B06-          ATTCCATAGCTGACAGTTCCATCTCCTATTCCCTTTTCTCCCCTCTCAAGTTCTTCTAGT
JMFF038B11+           ATTCCATAGCTGACAGTTCCATCTCCTATTCCCTTTTCTCCCCTCTCAAGTTCTTCTAGT
                      ____________________________________________________________
consensus             ATTCCATAGCTGACAGTTCCATCTCCTATTCCCTTTTCTCCCCTCTCAAGTTCTTCTAGT
 
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rJMFF038B11-          AATCTGAAGTTTCTTGGAACTACAACGGCAGATGAACCCTCAGAACCCATATCCTGGAGC
JMSF046B06+           AATCTGAAGTTTCTTGGAACTACAACGGCAGATGAACCCTCAGAACCCATATCCTGGAGC
rJMSF046B06-          AATCTGAAGTTTCTTGGAACTACAACGGCAGATGAACCCTCAGAACCCATATCCTGGAGC
JMFF038B11+           AATCTGAAGTTTCTTGGAACTACAACGGCAGATGAACCCTCAGAACCCATATCCTGGAGC
                      ____________________________________________________________
consensus             AATCTGAAGTTTCTTGGAACTACAACGGCAGATGAACCCTCAGAACCCATATCCTGGAGC
 
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rJMFF038B11-          ATTTGGAGTAGTTG                                              
JMSF046B06+           ATTTGGAGTAGTTGAAAGGGG                                       
rJMSF046B06-          ATTTGGAGTAGTTGAAAGGGG                                       
JMFF038B11+           ATTTGGAGTAGTTGAAAGGGGATTTGTATGGAAGGAAGAGAGAAATGAAGATTGAATAGT
                      ____________________________________________________________
consensus             ATTTGGAGTAGTTGAAAGGGGATTTGTATGGAAGGAAGAGAGAAATGAAGATTGAATAGT